RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 FGAP02671 866 aa12.99□□□□□ -0.33
ZNF544-213ENST00000599227 FAM160A1Q05DH4 1040 aa12.99□□□□□ -0.33
ZNF544-213ENST00000599227 TDRD7Q8NHU6 1098 aaKnown RBP12.99□□□□□ -0.33
ZNF544-213ENST00000599227 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
ZNF544-213ENST00000599227 XPO4Q9C0E2 1151 aaKnown RBP12.99□□□□□ -0.33
ZNF544-213ENST00000599227 PUS7LQ9H0K6 701 aaKnown RBP12.99□□□□□ -0.33
ZNF544-213ENST00000599227 TMEM67Q5HYA8 995 aa12.99□□□□□ -0.33
ZNF544-213ENST00000599227 PLBD2Q8NHP8 589 aa12.99□□□□□ -0.33
ZNF544-213ENST00000599227 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
ZNF544-213ENST00000599227 KCNJ14Q9UNX9 436 aa12.99□□□□□ -0.33
ZNF544-213ENST00000599227 SPTLC2O15270 562 aa12.99□□□□□ -0.33
ZNF544-213ENST00000599227 PIGBQ92521 554 aa12.99□□□□□ -0.33
ZNF544-213ENST00000599227 TRERF1Q96PN7 1200 aa12.99□□□□□ -0.33
ZNF544-213ENST00000599227 NAT10Q9H0A0 1025 aaKnown RBP12.99□□□□□ -0.33
ZNF544-213ENST00000599227 PXDNLA1KZ92 1463 aa12.98□□□□□ -0.33
ZNF544-213ENST00000599227 GPAA1O43292 621 aa12.98□□□□□ -0.33
ZNF544-213ENST00000599227 KCNQ2O43526 872 aa12.98□□□□□ -0.33
ZNF544-213ENST00000599227 ATP1A3P13637 1013 aa12.98□□□□□ -0.33
ZNF544-213ENST00000599227 GYG1P46976 350 aa12.98□□□□□ -0.33
ZNF544-213ENST00000599227 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
ZNF544-213ENST00000599227 KCNB2Q92953 911 aa12.98□□□□□ -0.33
ZNF544-213ENST00000599227 ZSWIM4Q9H7M6 989 aa12.98□□□□□ -0.33
ZNF544-213ENST00000599227 MBD4O95243 580 aa12.98□□□□□ -0.33
ZNF544-213ENST00000599227 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
ZNF544-213ENST00000599227 XRN1Q8IZH2 1706 aaKnown RBP12.98□□□□□ -0.33
ZNF544-213ENST00000599227 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
ZNF544-213ENST00000599227 HMGB1P09429 215 aaKnown RBP12.97□□□□□ -0.33
ZNF544-213ENST00000599227 IL15P40933 162 aaPredicted RBP12.97□□□□□ -0.33
ZNF544-213ENST00000599227 AFMP43652 599 aa12.97□□□□□ -0.33
ZNF544-213ENST00000599227 STX17P56962 302 aa12.97□□□□□ -0.33
ZNF544-213ENST00000599227 IQCB1Q15051 598 aa12.97□□□□□ -0.33
ZNF544-213ENST00000599227 ATG9AQ7Z3C6 839 aa12.97□□□□□ -0.33
ZNF544-213ENST00000599227 ANKIB1Q9P2G1 1089 aa12.97□□□□□ -0.33
ZNF544-213ENST00000599227 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
ZNF544-213ENST00000599227 CYP7A1P22680 504 aa12.97□□□□□ -0.33
ZNF544-213ENST00000599227 BRINP3Q76B58 766 aa12.97□□□□□ -0.33
ZNF544-213ENST00000599227 IL17RAQ96F46 866 aa12.97□□□□□ -0.33
ZNF544-213ENST00000599227 ALG1Q9BT22 464 aa12.97□□□□□ -0.33
ZNF544-213ENST00000599227 GOLGA8AA7E2F4 631 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 ZNF202O95125 648 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 IGHMBP2P38935 993 aaKnown RBP12.96□□□□□ -0.33
ZNF544-213ENST00000599227 TPM4P67936 248 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 DDB1Q16531 1140 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.96□□□□□ -0.33
ZNF544-213ENST00000599227 SENP2Q9HC62 589 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 RCOR1Q9UKL0 485 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 SLC4A4Q9Y6R1 1079 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 NRDCO43847 1150 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 FDPSP14324 419 aaKnown RBP12.96□□□□□ -0.33
ZNF544-213ENST00000599227 SNW1Q13573 536 aaKnown RBP12.96□□□□□ -0.33
ZNF544-213ENST00000599227 ZNF827Q17R98 1081 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 UBAC1Q9BSL1 405 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 DNAI1Q9UI46 699 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 MAPK8IP1Q9UQF2 711 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 NWD1Q149M9 1564 aa12.96□□□□□ -0.33
ZNF544-213ENST00000599227 CARMIL3Q8ND23 1372 aa12.96□□□□□ -0.34
ZNF544-213ENST00000599227 KIF28PB7ZC32 967 aa12.96□□□□□ -0.34
ZNF544-213ENST00000599227 CLSTN1O94985 981 aa12.96□□□□□ -0.34
ZNF544-213ENST00000599227 PNOCQ13519 176 aa12.96□□□□□ -0.34
ZNF544-213ENST00000599227 ZMYM1Q5SVZ6 1142 aa12.96□□□□□ -0.34
ZNF544-213ENST00000599227 KIF18AQ8NI77 898 aa12.96□□□□□ -0.34
ZNF544-213ENST00000599227 ST7Q9NRC1 585 aa12.96□□□□□ -0.34
ZNF544-213ENST00000599227 FAM208AQ9UK61 1670 aaKnown RBP12.95□□□□□ -0.34
ZNF544-213ENST00000599227 RGPD1P0DJD0 1748 aa12.95□□□□□ -0.34
ZNF544-213ENST00000599227 URI1O94763 535 aaPredicted RBP12.95□□□□□ -0.34
ZNF544-213ENST00000599227 FOXO4P98177 505 aa12.95□□□□□ -0.34
ZNF544-213ENST00000599227 ERCC6LQ2NKX8 1250 aa12.95□□□□□ -0.34
ZNF544-213ENST00000599227 SMAP1Q8IYB5 467 aaPredicted RBP12.95□□□□□ -0.34
ZNF544-213ENST00000599227 MARCH6O60337 910 aa12.95□□□□□ -0.34
ZNF544-213ENST00000599227 METAP2P50579 478 aaKnown RBP eCLIP12.95□□□□□ -0.34
ZNF544-213ENST00000599227 DHX40Q8IX18 779 aaKnown RBP12.95□□□□□ -0.34
ZNF544-213ENST00000599227 USPL1Q5W0Q7 1092 aa12.95□□□□□ -0.34
ZNF544-213ENST00000599227 NCOA7Q8NI08 942 aa12.95□□□□□ -0.34
ZNF544-213ENST00000599227 CTAGE5O15320 804 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 SYKP43405 635 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
ZNF544-213ENST00000599227 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
ZNF544-213ENST00000599227 EPC1Q9H2F5 836 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 HELLSQ9NRZ9 838 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 SLC12A7Q9Y666 1083 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 ZNF532Q9HCE3 1301 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 SMIM22K7EJ46 135 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 ZSCAN20P17040 1043 aaPredicted RBP12.94□□□□□ -0.34
ZNF544-213ENST00000599227 USP5P45974 858 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 SAFBQ15424 915 aaKnown RBP eCLIP12.94□□□□□ -0.34
ZNF544-213ENST00000599227 NAA16Q6N069 864 aaPredicted RBP12.94□□□□□ -0.34
ZNF544-213ENST00000599227 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
ZNF544-213ENST00000599227 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
ZNF544-213ENST00000599227 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 PFKFB1P16118 471 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 CGNQ9P2M7 1197 aaKnown RBP12.94□□□□□ -0.34
ZNF544-213ENST00000599227 CTNNA3Q9UI47 895 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 STX8Q9UNK0 236 aa12.94□□□□□ -0.34
ZNF544-213ENST00000599227 FMN2Q9NZ56 1722 aa12.93□□□□□ -0.34
ZNF544-213ENST00000599227 POLR3GO15318 223 aaPredicted RBP12.93□□□□□ -0.34
ZNF544-213ENST00000599227 UBASH3AP57075 661 aa12.93□□□□□ -0.34
ZNF544-213ENST00000599227 LRRN4CLQ8ND94 238 aa12.93□□□□□ -0.34
ZNF544-213ENST00000599227 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms