RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 DZIP1LQ8IYY4 767 aaKnown RBP22.32■■□□□ 1.16
CHMP2A-203ENST00000597209 FRAT1Q92837 279 aaPredicted RBP22.32■■□□□ 1.16
CHMP2A-203ENST00000597209 VEZTQ9HBM0 779 aa22.32■■□□□ 1.16
CHMP2A-203ENST00000597209 ZNF70Q9UC06 446 aaPredicted RBP22.32■■□□□ 1.16
CHMP2A-203ENST00000597209 GRIK5Q16478 980 aa22.31■■□□□ 1.16
CHMP2A-203ENST00000597209 ATP2B3Q16720 1220 aa22.31■■□□□ 1.16
CHMP2A-203ENST00000597209 ZKSCAN2Q63HK3 967 aa22.31■■□□□ 1.16
CHMP2A-203ENST00000597209 RNF186Q9NXI6 227 aa22.31■■□□□ 1.16
CHMP2A-203ENST00000597209 PPP1R12BO60237 982 aaPredicted RBP22.3■■□□□ 1.16
CHMP2A-203ENST00000597209 RASA3Q14644 834 aa22.3■■□□□ 1.16
CHMP2A-203ENST00000597209 WDR66Q8TBY9 1149 aa22.3■■□□□ 1.16
CHMP2A-203ENST00000597209 TDRD3Q9H7E2 651 aaKnown RBP22.3■■□□□ 1.16
CHMP2A-203ENST00000597209 ANGEL1Q9UNK9 670 aaKnown RBP22.3■■□□□ 1.16
CHMP2A-203ENST00000597209 PA2G4Q9UQ80 394 aaKnown RBP22.3■■□□□ 1.16
CHMP2A-203ENST00000597209 MAST3O60307 1309 aa22.3■■□□□ 1.16
CHMP2A-203ENST00000597209 ZBED9Q6R2W3 1325 aa22.3■■□□□ 1.16
CHMP2A-203ENST00000597209 SSC5DA1L4H1 1573 aa22.29■■□□□ 1.16
CHMP2A-203ENST00000597209 AKAP11Q9UKA4 1901 aa22.29■■□□□ 1.16
CHMP2A-203ENST00000597209 PRKG1Q13976 671 aa22.29■■□□□ 1.16
CHMP2A-203ENST00000597209 TEKT1Q969V4 418 aa22.29■■□□□ 1.16
CHMP2A-203ENST00000597209 TNNQ9UQP3 1299 aa22.29■■□□□ 1.16
CHMP2A-203ENST00000597209 SRGAP3O43295 1099 aa22.28■■□□□ 1.16
CHMP2A-203ENST00000597209 CAPN15O75808 1086 aa22.28■■□□□ 1.16
CHMP2A-203ENST00000597209 GNAI2P04899 355 aa22.28■■□□□ 1.16
CHMP2A-203ENST00000597209 ZDHHC15Q96MV8 337 aa22.28■■□□□ 1.16
CHMP2A-203ENST00000597209 GNL3LQ9NVN8 582 aaKnown RBP22.28■■□□□ 1.16
CHMP2A-203ENST00000597209 SEMA3EO15041 775 aa22.27■■□□□ 1.16
CHMP2A-203ENST00000597209 TRPA1O75762 1119 aa22.27■■□□□ 1.16
CHMP2A-203ENST00000597209 TM4SF4P48230 202 aa22.27■■□□□ 1.16
CHMP2A-203ENST00000597209 NBPF12Q5TAG4 269 aaPredicted RBP22.27■■□□□ 1.16
CHMP2A-203ENST00000597209 HHIPL2Q6UWX4 724 aa22.27■■□□□ 1.16
CHMP2A-203ENST00000597209 CLUAP1Q96AJ1 413 aa22.27■■□□□ 1.16
CHMP2A-203ENST00000597209 MYH13Q9UKX3 1938 aa22.27■■□□□ 1.16
CHMP2A-203ENST00000597209 TNNI2P48788 182 aa22.26■■□□□ 1.15
CHMP2A-203ENST00000597209 SPRYD7Q5W111 196 aa22.25■■□□□ 1.15
CHMP2A-203ENST00000597209 TMEM57Q8N5G2 664 aa22.25■■□□□ 1.15
CHMP2A-203ENST00000597209 SLC10A4Q96EP9 437 aa22.25■■□□□ 1.15
CHMP2A-203ENST00000597209 TEPSINQ96N21 525 aa22.25■■□□□ 1.15
CHMP2A-203ENST00000597209 DENND2AQ9ULE3 1009 aa22.25■■□□□ 1.15
CHMP2A-203ENST00000597209 AKAP2Q9Y2D5 859 aa22.25■■□□□ 1.15
CHMP2A-203ENST00000597209 SALL1Q9NSC2 1324 aa22.25■■□□□ 1.15
CHMP2A-203ENST00000597209 USP2O75604 605 aaPredicted RBP22.24■■□□□ 1.15
CHMP2A-203ENST00000597209 IREB2P48200 963 aaKnown RBP22.24■■□□□ 1.15
CHMP2A-203ENST00000597209 FKBP1CQ5VVH2 108 aa22.24■■□□□ 1.15
CHMP2A-203ENST00000597209 APOBEC3HQ6NTF7 200 aaKnown RBP22.24■■□□□ 1.15
CHMP2A-203ENST00000597209 FZD1Q9UP38 647 aa22.24■■□□□ 1.15
CHMP2A-203ENST00000597209 CASP8AP2Q9UKL3 1982 aa22.23■■□□□ 1.15
CHMP2A-203ENST00000597209 TCP10L2B9ZVM9 353 aa22.23■■□□□ 1.15
CHMP2A-203ENST00000597209 SREBF2Q12772 1141 aa22.23■■□□□ 1.15
CHMP2A-203ENST00000597209 ABHD8Q96I13 439 aa22.23■■□□□ 1.15
CHMP2A-203ENST00000597209 ZBTB48P10074 688 aaPredicted RBP22.22■■□□□ 1.15
CHMP2A-203ENST00000597209 PHKA1P46020 1223 aa22.22■■□□□ 1.15
CHMP2A-203ENST00000597209 INHBEP58166 350 aa22.22■■□□□ 1.15
CHMP2A-203ENST00000597209 CCDC102BQ68D86 513 aa22.22■■□□□ 1.15
CHMP2A-203ENST00000597209 FAM83AQ86UY5 434 aa22.22■■□□□ 1.15
CHMP2A-203ENST00000597209 ANKRD13AQ8IZ07 590 aa22.22■■□□□ 1.15
CHMP2A-203ENST00000597209 PDS5AQ29RF7 1337 aaKnown RBP22.22■■□□□ 1.15
CHMP2A-203ENST00000597209 TIMM10P62072 90 aa22.21■■□□□ 1.15
CHMP2A-203ENST00000597209 TFCP2Q12800 502 aa22.21■■□□□ 1.15
CHMP2A-203ENST00000597209 TMOD2Q9NZR1 351 aa22.21■■□□□ 1.15
CHMP2A-203ENST00000597209 LAMB1P07942 1786 aa22.2■■□□□ 1.14
CHMP2A-203ENST00000597209 PNMA6EA0A0J9YXQ4 647 aa22.2■■□□□ 1.14
CHMP2A-203ENST00000597209 A0A1B0GUL7 405 aa22.2■■□□□ 1.14
CHMP2A-203ENST00000597209 ADORA1P30542 326 aa22.2■■□□□ 1.14
CHMP2A-203ENST00000597209 ZGPATQ8N5A5 531 aaKnown RBP22.2■■□□□ 1.14
CHMP2A-203ENST00000597209 WNK4Q96J92 1243 aa22.2■■□□□ 1.14
CHMP2A-203ENST00000597209 CLMNQ96JQ2 1002 aa22.2■■□□□ 1.14
CHMP2A-203ENST00000597209 CFHR5Q9BXR6 569 aa22.2■■□□□ 1.14
CHMP2A-203ENST00000597209 TMEM39BQ9GZU3 492 aa22.2■■□□□ 1.14
CHMP2A-203ENST00000597209 MANSC4A6NHS7 340 aaPredicted RBP22.19■■□□□ 1.14
CHMP2A-203ENST00000597209 LDHBP07195 334 aaKnown RBP22.19■■□□□ 1.14
CHMP2A-203ENST00000597209 PRDX5P30044 214 aa22.19■■□□□ 1.14
CHMP2A-203ENST00000597209 MKRN3Q13064 507 aaKnown RBP22.19■■□□□ 1.14
CHMP2A-203ENST00000597209 MVPQ14764 893 aaKnown RBP22.19■■□□□ 1.14
CHMP2A-203ENST00000597209 NOM1Q5C9Z4 860 aaKnown RBP22.19■■□□□ 1.14
CHMP2A-203ENST00000597209 FTSJ3Q8IY81 847 aaKnown RBP22.19■■□□□ 1.14
CHMP2A-203ENST00000597209 XAGE2Q96GT9 111 aa22.19■■□□□ 1.14
CHMP2A-203ENST00000597209 MCOLN1Q9GZU1 580 aa22.19■■□□□ 1.14
CHMP2A-203ENST00000597209 G3BP1Q13283 466 aaKnown RBP eCLIP22.18■■□□□ 1.14
CHMP2A-203ENST00000597209 POLA2Q14181 598 aa22.18■■□□□ 1.14
CHMP2A-203ENST00000597209 CDAN1Q8IWY9 1227 aa22.18■■□□□ 1.14
CHMP2A-203ENST00000597209 DAGLAQ9Y4D2 1042 aa22.18■■□□□ 1.14
CHMP2A-203ENST00000597209 RPAP1Q9BWH6 1393 aaPredicted RBP22.17■■□□□ 1.14
CHMP2A-203ENST00000597209 ZBTB7BO15156 539 aaPredicted RBP22.17■■□□□ 1.14
CHMP2A-203ENST00000597209 ALDH1A1P00352 501 aa22.17■■□□□ 1.14
CHMP2A-203ENST00000597209 CACNB3P54284 484 aa22.17■■□□□ 1.14
CHMP2A-203ENST00000597209 ATP8B2P98198 1209 aa22.17■■□□□ 1.14
CHMP2A-203ENST00000597209 DGKZQ13574 1117 aa22.17■■□□□ 1.14
CHMP2A-203ENST00000597209 HOOK2Q96ED9 719 aa22.17■■□□□ 1.14
CHMP2A-203ENST00000597209 MAP3K9P80192 1104 aa22.16■■□□□ 1.14
CHMP2A-203ENST00000597209 RASGRF1Q13972 1273 aa22.16■■□□□ 1.14
CHMP2A-203ENST00000597209 SSH3Q8TE77 659 aa22.16■■□□□ 1.14
CHMP2A-203ENST00000597209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.16■■□□□ 1.14
CHMP2A-203ENST00000597209 TBC1D8O95759 1140 aa22.15■■□□□ 1.14
CHMP2A-203ENST00000597209 RLBP1P12271 317 aa22.15■■□□□ 1.14
CHMP2A-203ENST00000597209 DIXDC1Q155Q3 683 aa22.15■■□□□ 1.14
CHMP2A-203ENST00000597209 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.15■■□□□ 1.14
CHMP2A-203ENST00000597209 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.15■■□□□ 1.14
CHMP2A-203ENST00000597209 FAM151AQ8WW52 585 aa22.15■■□□□ 1.14
CHMP2A-203ENST00000597209 NEUROD6Q96NK8 337 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms