RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 SRGAP3O43295 1099 aa19.38■□□□□ 0.69
PPFIA4-208ENST00000597023 SPDYE2Q495Y8 402 aa19.38■□□□□ 0.69
PPFIA4-208ENST00000597023 TBC1D22AQ8WUA7 517 aa19.38■□□□□ 0.69
PPFIA4-208ENST00000597023 ADORA1P30542 326 aa19.37■□□□□ 0.69
PPFIA4-208ENST00000597023 IL15P40933 162 aaPredicted RBP19.37■□□□□ 0.69
PPFIA4-208ENST00000597023 CACNB3P54284 484 aa19.37■□□□□ 0.69
PPFIA4-208ENST00000597023 LDLRAD1Q5T700 205 aa19.37■□□□□ 0.69
PPFIA4-208ENST00000597023 CDAN1Q8IWY9 1227 aa19.37■□□□□ 0.69
PPFIA4-208ENST00000597023 TMEM57Q8N5G2 664 aa19.37■□□□□ 0.69
PPFIA4-208ENST00000597023 CLMNQ96JQ2 1002 aa19.37■□□□□ 0.69
PPFIA4-208ENST00000597023 COPRSQ9NQ92 184 aa19.37■□□□□ 0.69
PPFIA4-208ENST00000597023 FBXO3Q9UK99 471 aa19.37■□□□□ 0.69
PPFIA4-208ENST00000597023 PPP2R3BQ9Y5P8 575 aa19.37■□□□□ 0.69
PPFIA4-208ENST00000597023 SSC5DA1L4H1 1573 aa19.36■□□□□ 0.69
PPFIA4-208ENST00000597023 SUPT20HL1Q3ZLR7 823 aa19.36■□□□□ 0.69
PPFIA4-208ENST00000597023 ZKSCAN2Q63HK3 967 aa19.36■□□□□ 0.69
PPFIA4-208ENST00000597023 TEKT1Q969V4 418 aa19.36■□□□□ 0.69
PPFIA4-208ENST00000597023 ABHD8Q96I13 439 aa19.36■□□□□ 0.69
PPFIA4-208ENST00000597023 PPP1R12BO60237 982 aaPredicted RBP19.35■□□□□ 0.69
PPFIA4-208ENST00000597023 USP2O75604 605 aaPredicted RBP19.35■□□□□ 0.69
PPFIA4-208ENST00000597023 PHKA1P46020 1223 aa19.35■□□□□ 0.69
PPFIA4-208ENST00000597023 TIMM10P62072 90 aa19.35■□□□□ 0.69
PPFIA4-208ENST00000597023 SLC10A4Q96EP9 437 aa19.35■□□□□ 0.69
PPFIA4-208ENST00000597023 TMEM39BQ9GZU3 492 aa19.35■□□□□ 0.69
PPFIA4-208ENST00000597023 SAGE1Q9NXZ1 904 aa19.35■□□□□ 0.69
PPFIA4-208ENST00000597023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.35■□□□□ 0.69
PPFIA4-208ENST00000597023 COL1A1P02452 1464 aaPredicted RBP19.35■□□□□ 0.69
PPFIA4-208ENST00000597023 GNAI2P04899 355 aa19.34■□□□□ 0.69
PPFIA4-208ENST00000597023 TFCP2Q12800 502 aa19.34■□□□□ 0.69
PPFIA4-208ENST00000597023 TNFAIP1Q13829 316 aa19.34■□□□□ 0.69
PPFIA4-208ENST00000597023 PNMA6EA0A0J9YXQ4 647 aa19.33■□□□□ 0.68
PPFIA4-208ENST00000597023 TBC1D8O95759 1140 aa19.33■□□□□ 0.68
PPFIA4-208ENST00000597023 HDLBPQ00341 1268 aaKnown RBP19.33■□□□□ 0.68
PPFIA4-208ENST00000597023 DGKZQ13574 1117 aa19.33■□□□□ 0.68
PPFIA4-208ENST00000597023 MAP3K11Q16584 847 aa19.33■□□□□ 0.68
PPFIA4-208ENST00000597023 SPRYD7Q5W111 196 aa19.33■□□□□ 0.68
PPFIA4-208ENST00000597023 APOBEC3HQ6NTF7 200 aaKnown RBP19.33■□□□□ 0.68
PPFIA4-208ENST00000597023 WDR66Q8TBY9 1149 aa19.33■□□□□ 0.68
PPFIA4-208ENST00000597023 MCOLN1Q9GZU1 580 aa19.33■□□□□ 0.68
PPFIA4-208ENST00000597023 PRDX5P30044 214 aa19.32■□□□□ 0.68
PPFIA4-208ENST00000597023 MTX1Q13505 466 aa19.32■□□□□ 0.68
PPFIA4-208ENST00000597023 DIXDC1Q155Q3 683 aa19.32■□□□□ 0.68
PPFIA4-208ENST00000597023 REM2Q8IYK8 340 aaPredicted RBP19.32■□□□□ 0.68
PPFIA4-208ENST00000597023 TEPSINQ96N21 525 aa19.32■□□□□ 0.68
PPFIA4-208ENST00000597023 GNL3LQ9NVN8 582 aaKnown RBP19.32■□□□□ 0.68
PPFIA4-208ENST00000597023 CASP8AP2Q9UKL3 1982 aa19.32■□□□□ 0.68
PPFIA4-208ENST00000597023 IREB2P48200 963 aaKnown RBP19.31■□□□□ 0.68
PPFIA4-208ENST00000597023 TM4SF4P48230 202 aa19.31■□□□□ 0.68
PPFIA4-208ENST00000597023 TNNI2P48788 182 aa19.31■□□□□ 0.68
PPFIA4-208ENST00000597023 CCDC102BQ68D86 513 aa19.31■□□□□ 0.68
PPFIA4-208ENST00000597023 ZDHHC15Q96MV8 337 aa19.31■□□□□ 0.68
PPFIA4-208ENST00000597023 C1orf115Q9H7X2 142 aa19.31■□□□□ 0.68
PPFIA4-208ENST00000597023 SUGT1Q9Y2Z0 365 aa19.31■□□□□ 0.68
PPFIA4-208ENST00000597023 ZBED9Q6R2W3 1325 aa19.3■□□□□ 0.68
PPFIA4-208ENST00000597023 A0A1B0GUL7 405 aa19.3■□□□□ 0.68
PPFIA4-208ENST00000597023 CCDC85CA6NKD9 419 aa19.3■□□□□ 0.68
PPFIA4-208ENST00000597023 RLBP1P12271 317 aa19.3■□□□□ 0.68
PPFIA4-208ENST00000597023 HHIPL2Q6UWX4 724 aa19.3■□□□□ 0.68
PPFIA4-208ENST00000597023 WNK4Q96J92 1243 aa19.3■□□□□ 0.68
PPFIA4-208ENST00000597023 NEUROD6Q96NK8 337 aa19.3■□□□□ 0.68
PPFIA4-208ENST00000597023 MRIQ9BWK5 157 aa19.3■□□□□ 0.68
PPFIA4-208ENST00000597023 DENND2AQ9ULE3 1009 aa19.3■□□□□ 0.68
PPFIA4-208ENST00000597023 MAST3O60307 1309 aa19.29■□□□□ 0.68
PPFIA4-208ENST00000597023 GJA5P36382 358 aa19.29■□□□□ 0.68
PPFIA4-208ENST00000597023 FTSJ3Q8IY81 847 aaKnown RBP19.29■□□□□ 0.68
PPFIA4-208ENST00000597023 XAGE2Q96GT9 111 aa19.29■□□□□ 0.68
PPFIA4-208ENST00000597023 ELP3Q9H9T3 547 aa19.29■□□□□ 0.68
PPFIA4-208ENST00000597023 TMOD2Q9NZR1 351 aa19.29■□□□□ 0.68
PPFIA4-208ENST00000597023 ARAP2Q8WZ64 1704 aa19.28■□□□□ 0.68
PPFIA4-208ENST00000597023 ECM29Q5VYK3 1845 aa19.28■□□□□ 0.68
PPFIA4-208ENST00000597023 LDHBP07195 334 aaKnown RBP19.28■□□□□ 0.68
PPFIA4-208ENST00000597023 SREBF2Q12772 1141 aa19.28■□□□□ 0.68
PPFIA4-208ENST00000597023 G3BP1Q13283 466 aaKnown RBP eCLIP19.28■□□□□ 0.68
PPFIA4-208ENST00000597023 ITPRIPQ8IWB1 547 aa19.28■□□□□ 0.68
PPFIA4-208ENST00000597023 ANKRD13AQ8IZ07 590 aa19.28■□□□□ 0.68
PPFIA4-208ENST00000597023 R3HDMLQ9H3Y0 253 aa19.28■□□□□ 0.68
PPFIA4-208ENST00000597023 DAGLAQ9Y4D2 1042 aa19.28■□□□□ 0.68
PPFIA4-208ENST00000597023 RASGRF1Q13972 1273 aa19.27■□□□□ 0.68
PPFIA4-208ENST00000597023 CDC42EP5Q6NZY7 148 aa19.27■□□□□ 0.68
PPFIA4-208ENST00000597023 CNKSR2Q8WXI2 1034 aa19.27■□□□□ 0.68
PPFIA4-208ENST00000597023 AKAP2Q9Y2D5 859 aa19.27■□□□□ 0.68
PPFIA4-208ENST00000597023 TCP10Q12799 353 aa19.26■□□□□ 0.67
PPFIA4-208ENST00000597023 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.26■□□□□ 0.67
PPFIA4-208ENST00000597023 ABCF2Q9UG63 623 aa19.26■□□□□ 0.67
PPFIA4-208ENST00000597023 MANSC4A6NHS7 340 aaPredicted RBP19.25■□□□□ 0.67
PPFIA4-208ENST00000597023 SEMA3EO15041 775 aa19.25■□□□□ 0.67
PPFIA4-208ENST00000597023 MIGA2Q7L4E1 593 aa19.25■□□□□ 0.67
PPFIA4-208ENST00000597023 PANK1Q8TE04 598 aa19.25■□□□□ 0.67
PPFIA4-208ENST00000597023 ZNF296Q8WUU4 475 aaPredicted RBP19.25■□□□□ 0.67
PPFIA4-208ENST00000597023 OPTNQ96CV9 577 aa19.25■□□□□ 0.67
PPFIA4-208ENST00000597023 USP40Q9NVE5 1235 aa19.25■□□□□ 0.67
PPFIA4-208ENST00000597023 SALL1Q9NSC2 1324 aa19.25■□□□□ 0.67
PPFIA4-208ENST00000597023 AKAP11Q9UKA4 1901 aa19.24■□□□□ 0.67
PPFIA4-208ENST00000597023 ZBTB7BO15156 539 aaPredicted RBP19.24■□□□□ 0.67
PPFIA4-208ENST00000597023 ZBTB48P10074 688 aaPredicted RBP19.24■□□□□ 0.67
PPFIA4-208ENST00000597023 MAP3K9P80192 1104 aa19.24■□□□□ 0.67
PPFIA4-208ENST00000597023 ATP8B2P98198 1209 aa19.24■□□□□ 0.67
PPFIA4-208ENST00000597023 NFIAQ12857 509 aa19.24■□□□□ 0.67
PPFIA4-208ENST00000597023 VGLL4Q14135 290 aa19.24■□□□□ 0.67
PPFIA4-208ENST00000597023 POLA2Q14181 598 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms