RNA–Protein interactions for RNA: ENST00000596756.5

IRF3-212, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-212ENST00000596756 IFNL1Q8IU54 200 aa17.07■□□□□ 0.32
IRF3-212ENST00000596756 DZIP1LQ8IYY4 767 aaKnown RBP17.07■□□□□ 0.32
IRF3-212ENST00000596756 KLHDC4Q8TBB5 520 aa17.07■□□□□ 0.32
IRF3-212ENST00000596756 TDRD3Q9H7E2 651 aaKnown RBP17.07■□□□□ 0.32
IRF3-212ENST00000596756 CENPFP49454 3210 aa17.07■□□□□ 0.32
IRF3-212ENST00000596756 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
IRF3-212ENST00000596756 IGF2BP3O00425 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
IRF3-212ENST00000596756 CRKP46108 304 aa17.06■□□□□ 0.32
IRF3-212ENST00000596756 TNFAIP1Q13829 316 aa17.06■□□□□ 0.32
IRF3-212ENST00000596756 ALDH1L2Q3SY69 923 aa17.06■□□□□ 0.32
IRF3-212ENST00000596756 TEPSINQ96N21 525 aa17.06■□□□□ 0.32
IRF3-212ENST00000596756 IQSEC3Q9UPP2 1182 aaPredicted RBP17.06■□□□□ 0.32
IRF3-212ENST00000596756 GJA5P36382 358 aa17.05■□□□□ 0.32
IRF3-212ENST00000596756 IREB2P48200 963 aaKnown RBP17.05■□□□□ 0.32
IRF3-212ENST00000596756 RFX5P48382 616 aaPredicted RBP17.05■□□□□ 0.32
IRF3-212ENST00000596756 CAVIN4Q5BKX8 364 aa17.05■□□□□ 0.32
IRF3-212ENST00000596756 VPS37DQ86XT2 251 aa17.05■□□□□ 0.32
IRF3-212ENST00000596756 CDAN1Q8IWY9 1227 aa17.05■□□□□ 0.32
IRF3-212ENST00000596756 ANKRD13AQ8IZ07 590 aa17.05■□□□□ 0.32
IRF3-212ENST00000596756 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
IRF3-212ENST00000596756 CDCA7LQ96GN5 454 aa17.05■□□□□ 0.32
IRF3-212ENST00000596756 KIF16BQ96L93 1317 aa17.04■□□□□ 0.32
IRF3-212ENST00000596756 TESPA1A2RU30 521 aaPredicted RBP17.04■□□□□ 0.32
IRF3-212ENST00000596756 FGFR2P21802 821 aa17.04■□□□□ 0.32
IRF3-212ENST00000596756 HDLBPQ00341 1268 aaKnown RBP17.04■□□□□ 0.32
IRF3-212ENST00000596756 CHAF1AQ13111 956 aaPredicted RBP17.04■□□□□ 0.32
IRF3-212ENST00000596756 MIER1Q8N108 512 aa17.04■□□□□ 0.32
IRF3-212ENST00000596756 TBC1D22AQ8WUA7 517 aa17.04■□□□□ 0.32
IRF3-212ENST00000596756 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.04■□□□□ 0.32
IRF3-212ENST00000596756 KIAA0100Q14667 2235 aaKnown RBP17.03■□□□□ 0.32
IRF3-212ENST00000596756 BCAMP50895 628 aa17.03■□□□□ 0.32
IRF3-212ENST00000596756 PUM3Q15397 648 aaKnown RBP17.03■□□□□ 0.32
IRF3-212ENST00000596756 TCP10L2B9ZVM9 353 aa17.02■□□□□ 0.32
IRF3-212ENST00000596756 EYA2O00167 538 aa17.02■□□□□ 0.32
IRF3-212ENST00000596756 OTOP1Q7RTM1 612 aa17.02■□□□□ 0.32
IRF3-212ENST00000596756 PTPN18Q99952 460 aa17.02■□□□□ 0.32
IRF3-212ENST00000596756 TMEM39BQ9GZU3 492 aa17.02■□□□□ 0.32
IRF3-212ENST00000596756 SMC4Q9NTJ3 1288 aa17.02■□□□□ 0.32
IRF3-212ENST00000596756 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
IRF3-212ENST00000596756 CAP1Q01518 475 aa17.01■□□□□ 0.31
IRF3-212ENST00000596756 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.01■□□□□ 0.31
IRF3-212ENST00000596756 TEKT1Q969V4 418 aa17.01■□□□□ 0.31
IRF3-212ENST00000596756 ZDHHC15Q96MV8 337 aa17.01■□□□□ 0.31
IRF3-212ENST00000596756 MRIQ9BWK5 157 aa17.01■□□□□ 0.31
IRF3-212ENST00000596756 IFIT1P09914 478 aaKnown RBP17■□□□□ 0.31
IRF3-212ENST00000596756 TNNI2P48788 182 aa17■□□□□ 0.31
IRF3-212ENST00000596756 APOBEC3HQ6NTF7 200 aaKnown RBP17■□□□□ 0.31
IRF3-212ENST00000596756 ATG9AQ7Z3C6 839 aa17■□□□□ 0.31
IRF3-212ENST00000596756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17■□□□□ 0.314e-6■■■■□ 20.6
IRF3-212ENST00000596756 OPTNQ96CV9 577 aa17■□□□□ 0.31
IRF3-212ENST00000596756 MS4A4AQ96JQ5 239 aa17■□□□□ 0.31
IRF3-212ENST00000596756 ELP3Q9H9T3 547 aa17■□□□□ 0.31
IRF3-212ENST00000596756 SUGT1Q9Y2Z0 365 aa17■□□□□ 0.31
IRF3-212ENST00000596756 BRCA2P51587 3418 aa16.99■□□□□ 0.31
IRF3-212ENST00000596756 OTOFQ9HC10 1997 aa16.99■□□□□ 0.31
IRF3-212ENST00000596756 CT47B1P0C2W7 299 aaPredicted RBP16.99■□□□□ 0.31
IRF3-212ENST00000596756 CACNB3P54284 484 aa16.99■□□□□ 0.31
IRF3-212ENST00000596756 CRHR2Q13324 411 aa16.99■□□□□ 0.31
IRF3-212ENST00000596756 VGLL4Q14135 290 aa16.99■□□□□ 0.31
IRF3-212ENST00000596756 LPIN2Q92539 896 aa16.99■□□□□ 0.31
IRF3-212ENST00000596756 TRIM17Q9Y577 477 aa16.99■□□□□ 0.31
IRF3-212ENST00000596756 SLC5A1P13866 664 aa16.98■□□□□ 0.31
IRF3-212ENST00000596756 MAP3K9P80192 1104 aa16.98■□□□□ 0.31
IRF3-212ENST00000596756 FKBP1CQ5VVH2 108 aa16.98■□□□□ 0.31
IRF3-212ENST00000596756 INTS3Q68E01 1043 aaKnown RBP16.98■□□□□ 0.31
IRF3-212ENST00000596756 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
IRF3-212ENST00000596756 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
IRF3-212ENST00000596756 MAST3O60307 1309 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 POTEFA5A3E0 1075 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 CIAO1O76071 339 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 UBTFL1P0CB47 393 aaPredicted RBP16.97■□□□□ 0.31
IRF3-212ENST00000596756 OTUD7BQ6GQQ9 843 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 HHIPL2Q6UWX4 724 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 FAM83AQ86UY5 434 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 ARMC5Q96C12 935 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 ERO1AQ96HE7 468 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 FBXO3Q9UK99 471 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 PTPN22Q9Y2R2 807 aa16.97■□□□□ 0.31
IRF3-212ENST00000596756 WDR66Q8TBY9 1149 aa16.96■□□□□ 0.31
IRF3-212ENST00000596756 CD99L2Q8TCZ2 262 aa16.96■□□□□ 0.31
IRF3-212ENST00000596756 BRI3BPQ8WY22 251 aa16.96■□□□□ 0.31
IRF3-212ENST00000596756 RBBP6Q7Z6E9 1792 aaKnown RBP16.95■□□□□ 0.3
IRF3-212ENST00000596756 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
IRF3-212ENST00000596756 API5Q9BZZ5 524 aaKnown RBP16.95■□□□□ 0.3
IRF3-212ENST00000596756 SIL1Q9H173 461 aa16.95■□□□□ 0.3
IRF3-212ENST00000596756 TMOD2Q9NZR1 351 aa16.95■□□□□ 0.3
IRF3-212ENST00000596756 CSADQ9Y600 493 aa16.95■□□□□ 0.3
IRF3-212ENST00000596756 SPDYE5A6NIY4 337 aa16.94■□□□□ 0.3
IRF3-212ENST00000596756 GTF2A2P52657 109 aa16.94■□□□□ 0.3
IRF3-212ENST00000596756 SP3Q02447 781 aa16.94■□□□□ 0.3
IRF3-212ENST00000596756 ATP2B3Q16720 1220 aa16.94■□□□□ 0.3
IRF3-212ENST00000596756 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
IRF3-212ENST00000596756 EFCC1Q9HA90 598 aa16.94■□□□□ 0.3
IRF3-212ENST00000596756 LRRFIP2Q9Y608 721 aaKnown RBP16.94■□□□□ 0.3
IRF3-212ENST00000596756 SNCAIPQ9Y6H5 919 aa16.94■□□□□ 0.3
IRF3-212ENST00000596756 CCL15-CCL14A0A0B4J2E2 113 aa16.93■□□□□ 0.3
IRF3-212ENST00000596756 CCL15Q16663 113 aa16.93■□□□□ 0.3
IRF3-212ENST00000596756 WRNIP1Q96S55 665 aa16.93■□□□□ 0.3
IRF3-212ENST00000596756 CEP126Q9P2H0 1117 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms