RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 GJA5P36382 358 aa13.29□□□□□ -0.28
CHMP2A-202ENST00000596708 LRRC24Q50LG9 513 aa13.29□□□□□ -0.28
CHMP2A-202ENST00000596708 CAVIN4Q5BKX8 364 aa13.29□□□□□ -0.28
CHMP2A-202ENST00000596708 METTL24Q5JXM2 366 aa13.29□□□□□ -0.28
CHMP2A-202ENST00000596708 OPTNQ96CV9 577 aa13.29□□□□□ -0.28
CHMP2A-202ENST00000596708 ERO1AQ96HE7 468 aa13.29□□□□□ -0.28
CHMP2A-202ENST00000596708 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
CHMP2A-202ENST00000596708 TNRC18O15417 2968 aaPredicted RBP13.28□□□□□ -0.28
CHMP2A-202ENST00000596708 CRHR2Q13324 411 aa13.28□□□□□ -0.28
CHMP2A-202ENST00000596708 OTOP1Q7RTM1 612 aa13.28□□□□□ -0.28
CHMP2A-202ENST00000596708 FBXO33Q7Z6M2 555 aa13.28□□□□□ -0.28
CHMP2A-202ENST00000596708 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
CHMP2A-202ENST00000596708 CD99L2Q8TCZ2 262 aa13.28□□□□□ -0.28
CHMP2A-202ENST00000596708 TBC1D22AQ8WUA7 517 aa13.28□□□□□ -0.28
CHMP2A-202ENST00000596708 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
CHMP2A-202ENST00000596708 UTYO14607 1347 aa13.28□□□□□ -0.28
CHMP2A-202ENST00000596708 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
CHMP2A-202ENST00000596708 GRIK5Q16478 980 aa13.27□□□□□ -0.29
CHMP2A-202ENST00000596708 RABL6Q3YEC7 729 aaPredicted RBP13.27□□□□□ -0.29
CHMP2A-202ENST00000596708 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.29
CHMP2A-202ENST00000596708 PTPN18Q99952 460 aa13.27□□□□□ -0.29
CHMP2A-202ENST00000596708 TESPA1A2RU30 521 aaPredicted RBP13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 PDE8BO95263 885 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 BCAMP50895 628 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 SP3Q02447 781 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 RBBP6Q7Z6E9 1792 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 ANKRD44Q8N8A2 993 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 KLHDC4Q8TBB5 520 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 TEKT1Q969V4 418 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 TEPSINQ96N21 525 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 EFCC1Q9HA90 598 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 PTPN22Q9Y2R2 807 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 CSADQ9Y600 493 aa13.26□□□□□ -0.29
CHMP2A-202ENST00000596708 PTPRCP08575 1304 aa13.25□□□□□ -0.29
CHMP2A-202ENST00000596708 CCL15-CCL14A0A0B4J2E2 113 aa13.25□□□□□ -0.29
CHMP2A-202ENST00000596708 IFIT1P09914 478 aaKnown RBP13.25□□□□□ -0.29
CHMP2A-202ENST00000596708 CACNB3P54284 484 aa13.25□□□□□ -0.29
CHMP2A-202ENST00000596708 HDLBPQ00341 1268 aaKnown RBP13.25□□□□□ -0.29
CHMP2A-202ENST00000596708 TAF1CQ15572 869 aaPredicted RBP13.25□□□□□ -0.29
CHMP2A-202ENST00000596708 CCL15Q16663 113 aa13.25□□□□□ -0.29
CHMP2A-202ENST00000596708 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
CHMP2A-202ENST00000596708 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
CHMP2A-202ENST00000596708 MYH2Q9UKX2 1941 aa13.25□□□□□ -0.29
CHMP2A-202ENST00000596708 GTF2A2P52657 109 aa13.24□□□□□ -0.29
CHMP2A-202ENST00000596708 VGLL4Q14135 290 aa13.24□□□□□ -0.29
CHMP2A-202ENST00000596708 VGLL2Q8N8G2 317 aa13.24□□□□□ -0.29
CHMP2A-202ENST00000596708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHMP2A-202ENST00000596708 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
CHMP2A-202ENST00000596708 MS4A4AQ96JQ5 239 aa13.24□□□□□ -0.29
CHMP2A-202ENST00000596708 ZFYVE28Q9HCC9 887 aa13.24□□□□□ -0.29
CHMP2A-202ENST00000596708 MAST3O60307 1309 aa13.23□□□□□ -0.29
CHMP2A-202ENST00000596708 ZNF521Q96K83 1311 aa13.23□□□□□ -0.29
CHMP2A-202ENST00000596708 POTEFA5A3E0 1075 aa13.23□□□□□ -0.29
CHMP2A-202ENST00000596708 WDHD1O75717 1129 aaPredicted RBP13.23□□□□□ -0.29
CHMP2A-202ENST00000596708 ARHGEF6Q15052 776 aa13.23□□□□□ -0.29
CHMP2A-202ENST00000596708 BRI3BPQ8WY22 251 aa13.23□□□□□ -0.29
CHMP2A-202ENST00000596708 SSH1Q8WYL5 1049 aa13.23□□□□□ -0.29
CHMP2A-202ENST00000596708 MRIQ9BWK5 157 aa13.23□□□□□ -0.29
CHMP2A-202ENST00000596708 USP44Q9H0E7 712 aa13.23□□□□□ -0.29
CHMP2A-202ENST00000596708 E9PSI1 815 aa13.22□□□□□ -0.29
CHMP2A-202ENST00000596708 SLC5A1P13866 664 aa13.22□□□□□ -0.29
CHMP2A-202ENST00000596708 PUM3Q15397 648 aaKnown RBP13.22□□□□□ -0.29
CHMP2A-202ENST00000596708 HOOK2Q96ED9 719 aa13.22□□□□□ -0.29
CHMP2A-202ENST00000596708 ZDHHC15Q96MV8 337 aa13.22□□□□□ -0.29
CHMP2A-202ENST00000596708 WRNIP1Q96S55 665 aa13.22□□□□□ -0.29
CHMP2A-202ENST00000596708 ZSWIM8A7E2V4 1837 aa13.22□□□□□ -0.29
CHMP2A-202ENST00000596708 EYA2O00167 538 aa13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 FGFR2P21802 821 aa13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 DCAF15Q66K64 600 aa13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 HHIPL2Q6UWX4 724 aa13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 FAM83AQ86UY5 434 aa13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 ERO1BQ86YB8 467 aa13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 FAM43AQ8N2R8 423 aa13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 ZKSCAN4Q969J2 545 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 PCDH10Q9P2E7 1040 aa13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 SUGT1Q9Y2Z0 365 aa13.21□□□□□ -0.29
CHMP2A-202ENST00000596708 SPDYE5A6NIY4 337 aa13.2□□□□□ -0.3
CHMP2A-202ENST00000596708 CETPP11597 493 aa13.2□□□□□ -0.3
CHMP2A-202ENST00000596708 CAP1Q01518 475 aa13.2□□□□□ -0.3
CHMP2A-202ENST00000596708 APOBEC3HQ6NTF7 200 aaKnown RBP13.2□□□□□ -0.3
CHMP2A-202ENST00000596708 MIGA2Q7L4E1 593 aa13.2□□□□□ -0.3
CHMP2A-202ENST00000596708 WDR66Q8TBY9 1149 aa13.2□□□□□ -0.3
CHMP2A-202ENST00000596708 LPIN2Q92539 896 aa13.2□□□□□ -0.3
CHMP2A-202ENST00000596708 SNCAIPQ9Y6H5 919 aa13.2□□□□□ -0.3
CHMP2A-202ENST00000596708 KIF16BQ96L93 1317 aa13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 MGAMO43451 1857 aa13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 EN2P19622 333 aaPredicted RBP13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 RFX5P48382 616 aaPredicted RBP13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 SLFN5Q08AF3 891 aa13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 SNAPC2Q13487 334 aa13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 KIF22Q14807 665 aa13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 ALDH1L2Q3SY69 923 aa13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 FKBP1CQ5VVH2 108 aa13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 NBPF11Q86T75 865 aa13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 ARMC5Q96C12 935 aa13.19□□□□□ -0.3
CHMP2A-202ENST00000596708 ZNF341Q9BYN7 854 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms