RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PDCP20941 246 aa20.01■□□□□ 0.79
SHKBP1-205ENST00000594973 DDX11Q96FC9 970 aa20.01■□□□□ 0.79
SHKBP1-205ENST00000594973 GJD4Q96KN9 370 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-205ENST00000594973 CDC5LQ99459 802 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-205ENST00000594973 SPDYE4A6NLX3 237 aa20■□□□□ 0.79
SHKBP1-205ENST00000594973 SYCP1Q15431 976 aa20■□□□□ 0.79
SHKBP1-205ENST00000594973 RTL9Q8NET4 1388 aa20■□□□□ 0.79
SHKBP1-205ENST00000594973 ZPR1O75312 459 aa19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 TPM3P06753 285 aa19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 UBE3CQ15386 1083 aa19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 AMIGO3Q86WK7 504 aa19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 CCDC24Q8N4L8 307 aa19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 IQSEC3Q9UPP2 1182 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 TCHHQ07283 1943 aa19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 WTIPA6NIX2 430 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 ZNF213O14771 459 aa19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 RPS6KA4O75676 772 aa19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 CCT2P78371 535 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 ANKRD18AQ8IVF6 992 aa19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 COL4A1P02462 1669 aa19.99■□□□□ 0.79
SHKBP1-205ENST00000594973 MAGEB6Q8N7X4 407 aa19.98■□□□□ 0.79
SHKBP1-205ENST00000594973 SETDB2Q96T68 719 aa19.98■□□□□ 0.79
SHKBP1-205ENST00000594973 NARFQ9UHQ1 456 aa19.98■□□□□ 0.79
SHKBP1-205ENST00000594973 AFF2P51816 1311 aa19.98■□□□□ 0.79
SHKBP1-205ENST00000594973 PPFIA3O75145 1194 aa19.98■□□□□ 0.79
SHKBP1-205ENST00000594973 HSPA1LP34931 641 aa19.98■□□□□ 0.79
SHKBP1-205ENST00000594973 FAM173BQ6P4H8 233 aa19.98■□□□□ 0.79
SHKBP1-205ENST00000594973 GPHNQ9NQX3 736 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-205ENST00000594973 RTCBQ9Y3I0 505 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-205ENST00000594973 BCORQ6W2J9 1755 aa19.98■□□□□ 0.79
SHKBP1-205ENST00000594973 TCRBV5S4A2TA0A5A2 114 aa19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 PFKFB2O60825 505 aa19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 RC3H1Q5TC82 1133 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 ZNF771Q7L3S4 317 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 NBPF5PQ86XG9 351 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 TMEM87AQ8NBN3 555 aa19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 AIDAQ96BJ3 306 aa19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 NCOA5Q9HCD5 579 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 LAMA4Q16363 1823 aa19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 BTAF1O14981 1849 aa19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 U2AF2P26368 475 aaKnown RBP eCLIP19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 MAP3K12Q12852 859 aa19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 ZNF830Q96NB3 372 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 TTC12Q9H892 705 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-205ENST00000594973 MYO5AQ9Y4I1 1855 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-205ENST00000594973 ADCY5O95622 1261 aa19.96■□□□□ 0.79
SHKBP1-205ENST00000594973 SF3B3Q15393 1217 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-205ENST00000594973 AGXT2Q9BYV1 514 aa19.96■□□□□ 0.79
SHKBP1-205ENST00000594973 MYH7P12883 1935 aa19.96■□□□□ 0.79
SHKBP1-205ENST00000594973 ZNF831Q5JPB2 1677 aa19.96■□□□□ 0.79
SHKBP1-205ENST00000594973 RIOK3O14730 519 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-205ENST00000594973 CELF1Q92879 486 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-205ENST00000594973 ARHGEF1Q92888 912 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-205ENST00000594973 GYG1P46976 350 aa19.95■□□□□ 0.78
SHKBP1-205ENST00000594973 RALYLQ86SE5 291 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-205ENST00000594973 KIAA1524Q8TCG1 905 aa19.95■□□□□ 0.78
SHKBP1-205ENST00000594973 BCL11BQ9C0K0 894 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-205ENST00000594973 THSD7AQ9UPZ6 1657 aa19.95■□□□□ 0.78
SHKBP1-205ENST00000594973 ATRNO75882 1429 aa19.95■□□□□ 0.78
SHKBP1-205ENST00000594973 PRC1O43663 620 aa19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 PDIA3P30101 505 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 FOSBP53539 338 aa19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 NCOA7Q8NI08 942 aa19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 CERKQ8TCT0 537 aa19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 CGNQ9P2M7 1197 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 USP25Q9UHP3 1055 aa19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 STRBPQ96SI9 672 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 BSDC1Q9NW68 430 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 DENND2AQ9ULE3 1009 aa19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 LAMB2P55268 1798 aa19.94■□□□□ 0.78
SHKBP1-205ENST00000594973 ARAP2Q8WZ64 1704 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 H3BQV1 296 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 MBD4O95243 580 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 CTDNEP1O95476 244 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 PDIA4P13667 645 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 UBE2HP62256 183 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 IFFO2Q5TF58 517 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 SEPT12Q8IYM1 358 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 NSUN7Q8NE18 718 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 NYXQ9GZU5 481 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 NBPF3Q9H094 633 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 ARMT1Q9H993 441 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 MINPP1Q9UNW1 487 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 PTPDC1A2A3K4 754 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 NPHP1O15259 732 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 MB21D2Q8IYB1 491 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 NLRP3Q96P20 1036 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 LRP2BPQ9P2M1 347 aa19.93■□□□□ 0.78
SHKBP1-205ENST00000594973 TAF1P21675 1872 aa19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 TBC1D10CQ8IV04 446 aa19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 SMARCC2Q8TAQ2 1214 aa19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 LLPHQ9BRT6 129 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 ANTXR2P58335 489 aa19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 SLC20A2Q08357 652 aa19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 TRDNQ13061 729 aa19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 SLC10A5Q5PT55 438 aa19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 RAB11FIP4Q86YS3 637 aa19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 C17orf53Q8N3J3 647 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 ZNF274Q96GC6 653 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-205ENST00000594973 ABCF2Q9UG63 623 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms