RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 NUTM2AQ8IVF1 878 aaPredicted RBP22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 C8orf76Q96K31 380 aa22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 TMEM87BQ96K49 555 aa22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 CDC5LQ99459 802 aaKnown RBP22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 SEC31BQ9NQW1 1179 aa22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 GPHNQ9NQX3 736 aaPredicted RBP22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 ANGEL1Q9UNK9 670 aaKnown RBP22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 GNAT2P19087 354 aa22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 SASS6Q6UVJ0 657 aa22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 ORC3Q9UBD5 711 aaPredicted RBP22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 HPS5Q9UPZ3 1129 aa22.41■■□□□ 1.18
PRKCSH-209ENST00000589838 COL5A3P25940 1745 aaPredicted RBP22.4■■□□□ 1.18
PRKCSH-209ENST00000589838 BCORQ6W2J9 1755 aa22.4■■□□□ 1.18
PRKCSH-209ENST00000589838 NR1I2O75469 434 aa22.4■■□□□ 1.18
PRKCSH-209ENST00000589838 CDKL5O76039 1030 aa22.4■■□□□ 1.18
PRKCSH-209ENST00000589838 RASGRF1Q13972 1273 aa22.4■■□□□ 1.18
PRKCSH-209ENST00000589838 CPLX2Q6PUV4 134 aaKnown RBP22.4■■□□□ 1.18
PRKCSH-209ENST00000589838 RGL2O15211 777 aa22.39■■□□□ 1.18
PRKCSH-209ENST00000589838 CCDC73Q6ZRK6 1079 aa22.39■■□□□ 1.18
PRKCSH-209ENST00000589838 MAGEB6Q8N7X4 407 aa22.39■■□□□ 1.18
PRKCSH-209ENST00000589838 NBPF3Q9H094 633 aa22.39■■□□□ 1.18
PRKCSH-209ENST00000589838 MRVI1Q9Y6F6 885 aa22.39■■□□□ 1.18
PRKCSH-209ENST00000589838 CEBPZQ03701 1054 aaKnown RBP22.39■■□□□ 1.17
PRKCSH-209ENST00000589838 BRAPQ7Z569 592 aa22.39■■□□□ 1.17
PRKCSH-209ENST00000589838 TBC1D10CQ8IV04 446 aa22.39■■□□□ 1.17
PRKCSH-209ENST00000589838 USP28Q96RU2 1077 aa22.39■■□□□ 1.17
PRKCSH-209ENST00000589838 NAPBQ9H115 298 aa22.39■■□□□ 1.17
PRKCSH-209ENST00000589838 SH2B2O14492 632 aaPredicted RBP22.38■■□□□ 1.17
PRKCSH-209ENST00000589838 TPM3P06753 285 aa22.38■■□□□ 1.17
PRKCSH-209ENST00000589838 GUCY1B3Q02153 619 aa22.38■■□□□ 1.17
PRKCSH-209ENST00000589838 CCAR1Q8IX12 1150 aaKnown RBP22.38■■□□□ 1.17
PRKCSH-209ENST00000589838 FBXO18Q8NFZ0 1043 aa22.38■■□□□ 1.17
PRKCSH-209ENST00000589838 CNNM2Q9H8M5 875 aa22.38■■□□□ 1.17
PRKCSH-209ENST00000589838 RTEL1Q9NZ71 1219 aa22.38■■□□□ 1.17
PRKCSH-209ENST00000589838 CKAP2LQ8IYA6 745 aa22.37■■□□□ 1.17
PRKCSH-209ENST00000589838 IFNL3Q8IZI9 196 aa22.37■■□□□ 1.17
PRKCSH-209ENST00000589838 NACAP1Q9BZK3 213 aa22.37■■□□□ 1.17
PRKCSH-209ENST00000589838 CHD4Q14839 1912 aa22.37■■□□□ 1.17
PRKCSH-209ENST00000589838 C4AP0C0L4 1744 aa22.37■■□□□ 1.17
PRKCSH-209ENST00000589838 C4BP0C0L5 1744 aa22.37■■□□□ 1.17
PRKCSH-209ENST00000589838 PNPLA7Q6ZV29 1317 aa22.36■■□□□ 1.17
PRKCSH-209ENST00000589838 MBD4O95243 580 aa22.36■■□□□ 1.17
PRKCSH-209ENST00000589838 METAP2P50579 478 aaKnown RBP eCLIP22.36■■□□□ 1.171e-6■■□□□ 12.1
PRKCSH-209ENST00000589838 CHRNDQ07001 517 aa22.36■■□□□ 1.17
PRKCSH-209ENST00000589838 KIAA2012Q0VF49 1180 aa22.36■■□□□ 1.17
PRKCSH-209ENST00000589838 KRT23Q9C075 422 aa22.36■■□□□ 1.17
PRKCSH-209ENST00000589838 GNL3LQ9NVN8 582 aaKnown RBP22.36■■□□□ 1.17
PRKCSH-209ENST00000589838 TOM1O60784 492 aa22.35■■□□□ 1.17
PRKCSH-209ENST00000589838 PLCB2Q00722 1185 aa22.35■■□□□ 1.17
PRKCSH-209ENST00000589838 CYB5R4Q7L1T6 521 aa22.35■■□□□ 1.17
PRKCSH-209ENST00000589838 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.35■■□□□ 1.17
PRKCSH-209ENST00000589838 GOLGA6L6A8MZA4 724 aa22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 ME1P48163 572 aa22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 BCAMP50895 628 aa22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 ANO6Q4KMQ2 910 aa22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 ILDR1Q86SU0 546 aaPredicted RBP22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 ANKRD18AQ8IVF6 992 aa22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.34■■□□□ 1.171e-7■□□□□ 9.2
PRKCSH-209ENST00000589838 B4E1Z4 1266 aa22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 KINO60870 393 aaKnown RBP22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 YEATS4O95619 227 aa22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 LIFRP42702 1097 aa22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 FAM160A1Q05DH4 1040 aa22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 SF3B3Q15393 1217 aaKnown RBP22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 KCNG4Q8TDN1 519 aa22.34■■□□□ 1.17
PRKCSH-209ENST00000589838 TERF1P54274 439 aa22.33■■□□□ 1.17
PRKCSH-209ENST00000589838 APOA5Q6Q788 366 aa22.33■■□□□ 1.17
PRKCSH-209ENST00000589838 NFXL1Q6ZNB6 911 aa22.33■■□□□ 1.17
PRKCSH-209ENST00000589838 SGMS1Q86VZ5 419 aa22.33■■□□□ 1.17
PRKCSH-209ENST00000589838 ARMT1Q9H993 441 aa22.33■■□□□ 1.17
PRKCSH-209ENST00000589838 POLR3EQ9NVU0 708 aa22.33■■□□□ 1.17
PRKCSH-209ENST00000589838 LRP2BPQ9P2M1 347 aa22.33■■□□□ 1.17
PRKCSH-209ENST00000589838 A0A1W2PQ27 194 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 A0A1W2PQ64 194 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 A0A1W2PQD8 194 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 ZBTB43O43298 467 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 KCNQ2O43526 872 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 PPFIA3O75145 1194 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 UBE4AQ14139 1066 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 ADALQ6DHV7 355 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 SYNE3Q6ZMZ3 975 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 IGDCC4Q8TDY8 1250 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 MTA3Q9BTC8 594 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 CBX8Q9HC52 389 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 CNTNAP4Q9C0A0 1308 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 GSG1L2A8MUP6 293 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 SNAP23O00161 211 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 STK38Q15208 465 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 SF3A1Q15459 793 aaKnown RBP22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 TMEM67Q5HYA8 995 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 AKNAD1Q5T1N1 836 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 MFSD6Q6ZSS7 791 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 EPB41L4AQ9HCS5 686 aaPredicted RBP22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 TIAM2Q8IVF5 1701 aa22.32■■□□□ 1.16
PRKCSH-209ENST00000589838 FSIP1Q8NA03 581 aa22.31■■□□□ 1.16
PRKCSH-209ENST00000589838 FTOQ9C0B1 505 aaKnown RBP eCLIP22.31■■□□□ 1.162e-6■□□□□ 11.1
PRKCSH-209ENST00000589838 BSDC1Q9NW68 430 aaPredicted RBP22.31■■□□□ 1.16
PRKCSH-209ENST00000589838 SLC4A4Q9Y6R1 1079 aa22.31■■□□□ 1.16
PRKCSH-209ENST00000589838 NEDD4P46934 1319 aa22.31■■□□□ 1.16
PRKCSH-209ENST00000589838 TPM2P07951 284 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms