RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 FKBP5Q13451 457 aaPredicted RBP27.74■■■□□ 2.03
CAPNS1-205ENST00000588780 CASP7P55210 303 aa27.73■■■□□ 2.03
CAPNS1-205ENST00000588780 LACTBP83111 547 aaPredicted RBP27.73■■■□□ 2.03
CAPNS1-205ENST00000588780 SERPINA10Q9UK55 444 aa27.73■■■□□ 2.03
CAPNS1-205ENST00000588780 BRCA2P51587 3418 aa27.72■■■□□ 2.03
CAPNS1-205ENST00000588780 TLR2O60603 784 aa27.72■■■□□ 2.03
CAPNS1-205ENST00000588780 CETPP11597 493 aa27.72■■■□□ 2.03
CAPNS1-205ENST00000588780 TWISTNBQ3B726 338 aaPredicted RBP27.72■■■□□ 2.03
CAPNS1-205ENST00000588780 DZIP1LQ8IYY4 767 aaKnown RBP27.72■■■□□ 2.03
CAPNS1-205ENST00000588780 DNAAF4Q8WXU2 420 aa27.72■■■□□ 2.03
CAPNS1-205ENST00000588780 CNNM1Q9NRU3 951 aa27.72■■■□□ 2.03
CAPNS1-205ENST00000588780 FLIIQ13045 1269 aa27.71■■■□□ 2.03
CAPNS1-205ENST00000588780 LINS1Q8NG48 757 aa27.71■■■□□ 2.03
CAPNS1-205ENST00000588780 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.71■■■□□ 2.038e-20■■□□□ 14.3
CAPNS1-205ENST00000588780 TEPSINQ96N21 525 aa27.71■■■□□ 2.03
CAPNS1-205ENST00000588780 RBM27Q9P2N5 1060 aaKnown RBP27.71■■■□□ 2.03
CAPNS1-205ENST00000588780 GNRH1P01148 92 aa27.7■■■□□ 2.02
CAPNS1-205ENST00000588780 LDHAL6AQ6ZMR3 332 aa27.7■■■□□ 2.02
CAPNS1-205ENST00000588780 CRKP46108 304 aa27.69■■■□□ 2.02
CAPNS1-205ENST00000588780 PRMT2P55345 433 aa27.69■■■□□ 2.02
CAPNS1-205ENST00000588780 CCDC57Q2TAC2 916 aa27.69■■■□□ 2.02
CAPNS1-205ENST00000588780 ZNF594Q96JF6 807 aaPredicted RBP27.69■■■□□ 2.02
CAPNS1-205ENST00000588780 FAM205AQ6ZU69 1335 aa27.68■■■□□ 2.02
CAPNS1-205ENST00000588780 SPDYE5A6NIY4 337 aa27.68■■■□□ 2.02
CAPNS1-205ENST00000588780 BTBD19C9JJ37 291 aa27.68■■■□□ 2.02
CAPNS1-205ENST00000588780 SNAPC2Q13487 334 aa27.68■■■□□ 2.02
CAPNS1-205ENST00000588780 SLC17A8Q8NDX2 589 aa27.68■■■□□ 2.02
CAPNS1-205ENST00000588780 DLL1O00548 723 aa27.67■■■□□ 2.02
CAPNS1-205ENST00000588780 MTFR1Q15390 333 aa27.67■■■□□ 2.02
CAPNS1-205ENST00000588780 ERO1BQ86YB8 467 aa27.67■■■□□ 2.02
CAPNS1-205ENST00000588780 NKX2-3Q8TAU0 364 aa27.67■■■□□ 2.02
CAPNS1-205ENST00000588780 RAET1EQ8TD07 263 aa27.67■■■□□ 2.02
CAPNS1-205ENST00000588780 WRNIP1Q96S55 665 aa27.67■■■□□ 2.02
CAPNS1-205ENST00000588780 HTATIP2Q9BUP3 242 aa27.67■■■□□ 2.02
CAPNS1-205ENST00000588780 BIN2Q9UBW5 565 aaPredicted RBP27.67■■■□□ 2.02
CAPNS1-205ENST00000588780 HIBADHP31937 336 aaKnown RBP27.66■■■□□ 2.02
CAPNS1-205ENST00000588780 GYG1P46976 350 aa27.66■■■□□ 2.02
CAPNS1-205ENST00000588780 FOXO4P98177 505 aa27.66■■■□□ 2.02
CAPNS1-205ENST00000588780 LMBR1LQ6UX01 489 aa27.66■■■□□ 2.02
CAPNS1-205ENST00000588780 ZSWIM8A7E2V4 1837 aa27.65■■■□□ 2.02
CAPNS1-205ENST00000588780 HOXD10P28358 340 aa27.65■■■□□ 2.02
CAPNS1-205ENST00000588780 TDRD7Q8NHU6 1098 aaKnown RBP27.65■■■□□ 2.02
CAPNS1-205ENST00000588780 ZCCHC17Q9NP64 241 aaKnown RBP27.65■■■□□ 2.02
CAPNS1-205ENST00000588780 TMOD2Q9NZR1 351 aa27.65■■■□□ 2.02
CAPNS1-205ENST00000588780 IRF6O14896 467 aa27.64■■■□□ 2.02
CAPNS1-205ENST00000588780 FMNL1O95466 1100 aaPredicted RBP27.64■■■□□ 2.02
CAPNS1-205ENST00000588780 PSMC4P43686 418 aa27.64■■■□□ 2.02
CAPNS1-205ENST00000588780 CACNB3P54284 484 aa27.64■■■□□ 2.02
CAPNS1-205ENST00000588780 VPS37DQ86XT2 251 aa27.64■■■□□ 2.02
CAPNS1-205ENST00000588780 ZKSCAN4Q969J2 545 aaPredicted RBP27.64■■■□□ 2.02
CAPNS1-205ENST00000588780 SHISA4Q96DD7 197 aa27.64■■■□□ 2.02
CAPNS1-205ENST00000588780 CPA4Q9UI42 421 aa27.64■■■□□ 2.02
CAPNS1-205ENST00000588780 SNCAIPQ9Y6H5 919 aa27.64■■■□□ 2.02
CAPNS1-205ENST00000588780 FRAT2O75474 233 aaPredicted RBP27.63■■■□□ 2.01
CAPNS1-205ENST00000588780 CHAF1AQ13111 956 aaPredicted RBP27.63■■■□□ 2.01
CAPNS1-205ENST00000588780 NR2E3Q9Y5X4 410 aa27.63■■■□□ 2.01
CAPNS1-205ENST00000588780 GRK4P32298 578 aa27.62■■■□□ 2.01
CAPNS1-205ENST00000588780 HOOK2Q96ED9 719 aa27.62■■■□□ 2.01
CAPNS1-205ENST00000588780 SRRDQ9UH36 339 aa27.62■■■□□ 2.01
CAPNS1-205ENST00000588780 A0A1B0GUL6 1792 aa27.61■■■□□ 2.01
CAPNS1-205ENST00000588780 RNF208Q9H0X6 261 aa27.61■■■□□ 2.01
CAPNS1-205ENST00000588780 IQSEC3Q9UPP2 1182 aaPredicted RBP27.61■■■□□ 2.01
CAPNS1-205ENST00000588780 CCL5P13501 91 aa27.6■■■□□ 2.01
CAPNS1-205ENST00000588780 PPIL2Q13356 520 aa27.6■■■□□ 2.01
CAPNS1-205ENST00000588780 UBE4AQ14139 1066 aa27.6■■■□□ 2.01
CAPNS1-205ENST00000588780 TRIM47Q96LD4 638 aa27.6■■■□□ 2.01
CAPNS1-205ENST00000588780 RIPOR2Q9Y4F9 1068 aa27.6■■■□□ 2.01
CAPNS1-205ENST00000588780 DCAF15Q66K64 600 aa27.59■■■□□ 2.01
CAPNS1-205ENST00000588780 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.59■■■□□ 2.01
CAPNS1-205ENST00000588780 TEKT1Q969V4 418 aa27.59■■■□□ 2.01
CAPNS1-205ENST00000588780 FAM84BQ96KN1 310 aaPredicted RBP27.59■■■□□ 2.01
CAPNS1-205ENST00000588780 MYPNQ86TC9 1320 aa27.59■■■□□ 2.01
CAPNS1-205ENST00000588780 ARAP2Q8WZ64 1704 aa27.58■■■□□ 2.01
CAPNS1-205ENST00000588780 OSBPP22059 807 aa27.58■■■□□ 2.01
CAPNS1-205ENST00000588780 GJA8P48165 433 aa27.58■■■□□ 2.01
CAPNS1-205ENST00000588780 UBXN2AP68543 259 aa27.58■■■□□ 2.01
CAPNS1-205ENST00000588780 EPHA10Q5JZY3 1008 aa27.58■■■□□ 2.01
CAPNS1-205ENST00000588780 C17orf99Q6UX52 265 aa27.58■■■□□ 2.01
CAPNS1-205ENST00000588780 F6X3S4 739 aa27.57■■■□□ 2
CAPNS1-205ENST00000588780 GJB1P08034 283 aa27.57■■■□□ 2
CAPNS1-205ENST00000588780 PDHXO00330 501 aa27.56■■■□□ 2
CAPNS1-205ENST00000588780 CTGFP29279 349 aa27.56■■■□□ 2
CAPNS1-205ENST00000588780 GRIK5Q16478 980 aa27.56■■■□□ 2
CAPNS1-205ENST00000588780 C9orf78Q9NZ63 289 aaPredicted RBP27.56■■■□□ 2
CAPNS1-205ENST00000588780 PPATQ06203 517 aa27.55■■■□□ 2
CAPNS1-205ENST00000588780 MIGA2Q7L4E1 593 aa27.55■■■□□ 2
CAPNS1-205ENST00000588780 TBC1D22AQ8WUA7 517 aa27.55■■■□□ 2
CAPNS1-205ENST00000588780 ZNF341Q9BYN7 854 aa27.55■■■□□ 2
CAPNS1-205ENST00000588780 PRKRIP1Q9H875 184 aaPredicted RBP27.55■■■□□ 2
CAPNS1-205ENST00000588780 FARP2O94887 1054 aaPredicted RBP27.54■■■□□ 2
CAPNS1-205ENST00000588780 HDLBPQ00341 1268 aaKnown RBP27.54■■■□□ 2
CAPNS1-205ENST00000588780 SZT2Q5T011 3432 aa27.54■■■□□ 2
CAPNS1-205ENST00000588780 ANKRD23Q86SG2 305 aa27.54■■■□□ 2
CAPNS1-205ENST00000588780 GRM8O00222 908 aa27.53■■■□□ 2
CAPNS1-205ENST00000588780 CAVIN4Q5BKX8 364 aa27.53■■■□□ 2
CAPNS1-205ENST00000588780 BEND3Q5T5X7 828 aa27.53■■■□□ 2
CAPNS1-205ENST00000588780 FAM83AQ86UY5 434 aa27.53■■■□□ 2
CAPNS1-205ENST00000588780 PUS3Q9BZE2 481 aaKnown RBP27.53■■■□□ 2
CAPNS1-205ENST00000588780 WWC1Q8IX03 1113 aa27.52■■■□□ 2
CAPNS1-205ENST00000588780 U2AF1L4Q8WU68 220 aaKnown RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms