RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 ECM29Q5VYK3 1845 aa23.6■■□□□ 1.37
TPM4-204ENST00000586499 FKBP1BP68106 108 aa23.59■■□□□ 1.37
TPM4-204ENST00000586499 G3BP1Q13283 466 aaKnown RBP eCLIP23.59■■□□□ 1.376e-7■□□□□ 9.5
TPM4-204ENST00000586499 CCDC102BQ68D86 513 aa23.59■■□□□ 1.37
TPM4-204ENST00000586499 WDR66Q8TBY9 1149 aa23.59■■□□□ 1.37
TPM4-204ENST00000586499 PAPPA2Q9BXP8 1791 aa23.59■■□□□ 1.37
TPM4-204ENST00000586499 NOGQ13253 232 aa23.58■■□□□ 1.37
TPM4-204ENST00000586499 SPDYE2Q495Y8 402 aa23.58■■□□□ 1.37
TPM4-204ENST00000586499 SSH3Q8TE77 659 aa23.58■■□□□ 1.37
TPM4-204ENST00000586499 XAGE2Q96GT9 111 aa23.58■■□□□ 1.37
TPM4-204ENST00000586499 NEUROD6Q96NK8 337 aa23.58■■□□□ 1.37
TPM4-204ENST00000586499 GNL3LQ9NVN8 582 aaKnown RBP23.58■■□□□ 1.37
TPM4-204ENST00000586499 AKAP2Q9Y2D5 859 aa23.58■■□□□ 1.37
TPM4-204ENST00000586499 MYH13Q9UKX3 1938 aa23.58■■□□□ 1.37
TPM4-204ENST00000586499 NF2P35240 595 aa23.57■■□□□ 1.36
TPM4-204ENST00000586499 CTCFP49711 727 aaPredicted RBP23.57■■□□□ 1.36
TPM4-204ENST00000586499 HDLBPQ00341 1268 aaKnown RBP23.57■■□□□ 1.36
TPM4-204ENST00000586499 RASA3Q14644 834 aa23.57■■□□□ 1.36
TPM4-204ENST00000586499 TEKT1Q969V4 418 aa23.57■■□□□ 1.36
TPM4-204ENST00000586499 CCDC102AQ96A19 550 aa23.57■■□□□ 1.36
TPM4-204ENST00000586499 LBX1P52954 281 aa23.56■■□□□ 1.36
TPM4-204ENST00000586499 SUGT1Q9Y2Z0 365 aa23.56■■□□□ 1.36
TPM4-204ENST00000586499 TCP10L2B9ZVM9 353 aa23.55■■□□□ 1.36
TPM4-204ENST00000586499 SURF6O75683 361 aaKnown RBP23.55■■□□□ 1.36
TPM4-204ENST00000586499 SLC10A3P09131 477 aa23.55■■□□□ 1.36
TPM4-204ENST00000586499 HSPA8P11142 646 aaKnown RBP23.55■■□□□ 1.36
TPM4-204ENST00000586499 PRDX5P30044 214 aa23.55■■□□□ 1.36
TPM4-204ENST00000586499 KIF23Q02241 960 aaPredicted RBP23.55■■□□□ 1.36
TPM4-204ENST00000586499 NBPF12Q5TAG4 269 aaPredicted RBP23.55■■□□□ 1.36
TPM4-204ENST00000586499 BEGAINQ9BUH8 593 aa23.55■■□□□ 1.36
TPM4-204ENST00000586499 TSKSQ9UJT2 592 aa23.55■■□□□ 1.36
TPM4-204ENST00000586499 DENND2AQ9ULE3 1009 aa23.55■■□□□ 1.36
TPM4-204ENST00000586499 COG6Q9Y2V7 657 aa23.55■■□□□ 1.36
TPM4-204ENST00000586499 SSC5DA1L4H1 1573 aa23.54■■□□□ 1.36
TPM4-204ENST00000586499 MS4A1P11836 297 aa23.54■■□□□ 1.36
TPM4-204ENST00000586499 CACNB3P54284 484 aa23.54■■□□□ 1.36
TPM4-204ENST00000586499 RASGRF1Q13972 1273 aa23.54■■□□□ 1.36
TPM4-204ENST00000586499 APOBEC3HQ6NTF7 200 aaKnown RBP23.54■■□□□ 1.36
TPM4-204ENST00000586499 CEP85Q6P2H3 762 aa23.54■■□□□ 1.36
TPM4-204ENST00000586499 RASAL3Q86YV0 1011 aa23.54■■□□□ 1.36
TPM4-204ENST00000586499 ZDHHC15Q96MV8 337 aa23.54■■□□□ 1.36
TPM4-204ENST00000586499 MRIQ9BWK5 157 aa23.54■■□□□ 1.36
TPM4-204ENST00000586499 ANGEL1Q9UNK9 670 aaKnown RBP23.54■■□□□ 1.36
TPM4-204ENST00000586499 PPP2R3BQ9Y5P8 575 aa23.54■■□□□ 1.36
TPM4-204ENST00000586499 SEMA3EO15041 775 aa23.53■■□□□ 1.36
TPM4-204ENST00000586499 DIXDC1Q155Q3 683 aa23.53■■□□□ 1.36
TPM4-204ENST00000586499 CDAN1Q8IWY9 1227 aa23.53■■□□□ 1.36
TPM4-204ENST00000586499 MAST3O60307 1309 aa23.53■■□□□ 1.36
TPM4-204ENST00000586499 OS9Q13438 667 aaPredicted RBP23.52■■□□□ 1.36
TPM4-204ENST00000586499 MVPQ14764 893 aaKnown RBP23.52■■□□□ 1.36
TPM4-204ENST00000586499 HHIPL2Q6UWX4 724 aa23.52■■□□□ 1.36
TPM4-204ENST00000586499 ARMC9Q7Z3E5 817 aa23.52■■□□□ 1.36
TPM4-204ENST00000586499 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.52■■□□□ 1.36
TPM4-204ENST00000586499 LDHBP07195 334 aaKnown RBP23.51■■□□□ 1.35
TPM4-204ENST00000586499 TNFAIP1Q13829 316 aa23.51■■□□□ 1.35
TPM4-204ENST00000586499 SUPT20HL1Q3ZLR7 823 aa23.51■■□□□ 1.35
TPM4-204ENST00000586499 TMEM39BQ9GZU3 492 aa23.51■■□□□ 1.35
TPM4-204ENST00000586499 SALL1Q9NSC2 1324 aa23.51■■□□□ 1.35
TPM4-204ENST00000586499 LDLRAD1Q5T700 205 aa23.5■■□□□ 1.35
TPM4-204ENST00000586499 GORABQ5T7V8 394 aa23.5■■□□□ 1.35
TPM4-204ENST00000586499 C20orf194Q5TEA3 1177 aa23.5■■□□□ 1.35
TPM4-204ENST00000586499 TEPSINQ96N21 525 aa23.5■■□□□ 1.35
TPM4-204ENST00000586499 CSRNP1Q96S65 589 aa23.5■■□□□ 1.35
TPM4-204ENST00000586499 PRDM10Q9NQV6 1147 aa23.5■■□□□ 1.35
TPM4-204ENST00000586499 NOP58Q9Y2X3 529 aaKnown RBP23.5■■□□□ 1.35
TPM4-204ENST00000586499 DAGLAQ9Y4D2 1042 aa23.5■■□□□ 1.35
TPM4-204ENST00000586499 ZBTB22O15209 634 aa23.49■■□□□ 1.35
TPM4-204ENST00000586499 MKRN3Q13064 507 aaKnown RBP23.49■■□□□ 1.35
TPM4-204ENST00000586499 PI16Q6UXB8 463 aa23.49■■□□□ 1.35
TPM4-204ENST00000586499 PPP1R12BO60237 982 aaPredicted RBP23.48■■□□□ 1.35
TPM4-204ENST00000586499 USP2O75604 605 aaPredicted RBP23.48■■□□□ 1.35
TPM4-204ENST00000586499 TNNI3KQ59H18 835 aa23.48■■□□□ 1.35
TPM4-204ENST00000586499 IFFO2Q5TF58 517 aa23.48■■□□□ 1.35
TPM4-204ENST00000586499 TNS4Q8IZW8 715 aa23.48■■□□□ 1.35
TPM4-204ENST00000586499 CLMNQ96JQ2 1002 aa23.48■■□□□ 1.35
TPM4-204ENST00000586499 HMG20BQ9P0W2 317 aa23.48■■□□□ 1.35
TPM4-204ENST00000586499 ABCF2Q9UG63 623 aa23.48■■□□□ 1.35
TPM4-204ENST00000586499 FPGT-TNNI3KV9GXZ4 949 aa23.48■■□□□ 1.35
TPM4-204ENST00000586499 TNNI2P48788 182 aa23.47■■□□□ 1.35
TPM4-204ENST00000586499 MAP3K11Q16584 847 aa23.47■■□□□ 1.35
TPM4-204ENST00000586499 DBNDD2Q9BQY9 259 aa23.47■■□□□ 1.35
TPM4-204ENST00000586499 GPR108Q9NPR9 543 aa23.47■■□□□ 1.35
TPM4-204ENST00000586499 ZBTB40Q9NUA8 1239 aa23.47■■□□□ 1.35
TPM4-204ENST00000586499 DDX19BQ9UMR2 479 aa23.47■■□□□ 1.35
TPM4-204ENST00000586499 EXOC6BQ9Y2D4 811 aa23.47■■□□□ 1.35
TPM4-204ENST00000586499 PDS5AQ29RF7 1337 aaKnown RBP23.46■■□□□ 1.35
TPM4-204ENST00000586499 CDC42EP5Q6NZY7 148 aa23.46■■□□□ 1.35
TPM4-204ENST00000586499 TBC1D9Q6ZT07 1266 aa23.46■■□□□ 1.35
TPM4-204ENST00000586499 TMOD2Q9NZR1 351 aa23.46■■□□□ 1.35
TPM4-204ENST00000586499 ARID4AP29374 1257 aaPredicted RBP23.45■■□□□ 1.34
TPM4-204ENST00000586499 MCAMP43121 646 aa23.45■■□□□ 1.34
TPM4-204ENST00000586499 ZGPATQ8N5A5 531 aaKnown RBP23.45■■□□□ 1.34
TPM4-204ENST00000586499 SPATA5Q8NB90 893 aa23.45■■□□□ 1.34
TPM4-204ENST00000586499 SLC10A4Q96EP9 437 aa23.45■■□□□ 1.34
TPM4-204ENST00000586499 YTHDC1Q96MU7 727 aaKnown RBP23.45■■□□□ 1.34
TPM4-204ENST00000586499 CA12O43570 354 aa23.44■■□□□ 1.34
TPM4-204ENST00000586499 SIRT2Q8IXJ6 389 aa23.44■■□□□ 1.34
TPM4-204ENST00000586499 RNF186Q9NXI6 227 aa23.44■■□□□ 1.34
TPM4-204ENST00000586499 TLR7Q9NYK1 1049 aaKnown RBP23.44■■□□□ 1.34
TPM4-204ENST00000586499 TRPA1O75762 1119 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms