RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 CCDC171Q6TFL3 1326 aa17.24■□□□□ 0.35
SMARCD2-211ENST00000584483 CYP7A1P22680 504 aa17.24■□□□□ 0.35
SMARCD2-211ENST00000584483 TTLL5Q6EMB2 1281 aa17.24■□□□□ 0.35
SMARCD2-211ENST00000584483 MAP4K1Q92918 833 aa17.24■□□□□ 0.35
SMARCD2-211ENST00000584483 RASSF7Q02833 373 aa17.23■□□□□ 0.35
SMARCD2-211ENST00000584483 LRRFIP1Q32MZ4 808 aaKnown RBP17.23■□□□□ 0.35
SMARCD2-211ENST00000584483 MYH2Q9UKX2 1941 aa17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 G3V3G9 751 aa17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 GPAA1O43292 621 aa17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 LDHBP07195 334 aaKnown RBP17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 DYNLL1P63167 89 aaKnown RBP17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 MFSD14BQ5SR56 506 aa17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 DCAF8Q5TAQ9 597 aa17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 SPTY2D1Q68D10 685 aaPredicted RBP17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 VPS33BQ9H267 617 aa17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 PALD1Q9ULE6 856 aa17.22■□□□□ 0.35
SMARCD2-211ENST00000584483 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 ADAMTSL1Q8N6G6 1762 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 EPB41L2O43491 1005 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 NECTIN1Q15223 517 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 DIXDC1Q155Q3 683 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 DACT2Q5SW24 774 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 NAA16Q6N069 864 aaPredicted RBP17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 KIAA1211Q6ZU35 1233 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 LCORLQ8N3X6 602 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 LARGE2Q8N3Y3 721 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 ZGPATQ8N5A5 531 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 MIGA1Q8NAN2 632 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 FBXW7Q969H0 707 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 STRBPQ96SI9 672 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 RIOK1Q9BRS2 568 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 TAOK3Q9H2K8 898 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 ARMT1Q9H993 441 aa17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 UPF2Q9HAU5 1272 aaKnown RBP17.21■□□□□ 0.35
SMARCD2-211ENST00000584483 PRKAB2O43741 272 aa17.2■□□□□ 0.34
SMARCD2-211ENST00000584483 MBD4O95243 580 aa17.2■□□□□ 0.34
SMARCD2-211ENST00000584483 HSPD1P10809 573 aaKnown RBP17.2■□□□□ 0.34
SMARCD2-211ENST00000584483 YBX3P16989 372 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMARCD2-211ENST00000584483 HSPA4P34932 840 aa17.2■□□□□ 0.34
SMARCD2-211ENST00000584483 STRIP1Q5VSL9 837 aa17.2■□□□□ 0.34
SMARCD2-211ENST00000584483 RASEFQ8IZ41 740 aa17.2■□□□□ 0.34
SMARCD2-211ENST00000584483 TBC1D22AQ8WUA7 517 aa17.2■□□□□ 0.34
SMARCD2-211ENST00000584483 RBM8AQ9Y5S9 174 aaKnown RBP17.2■□□□□ 0.34
SMARCD2-211ENST00000584483 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
SMARCD2-211ENST00000584483 USP17L3A6NCW0 530 aa17.19■□□□□ 0.34
SMARCD2-211ENST00000584483 USP17L4A6NCW7 530 aa17.19■□□□□ 0.34
SMARCD2-211ENST00000584483 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
SMARCD2-211ENST00000584483 USP17L1Q7RTZ2 530 aa17.19■□□□□ 0.34
SMARCD2-211ENST00000584483 KCNB2Q92953 911 aa17.19■□□□□ 0.34
SMARCD2-211ENST00000584483 DSCC1Q9BVC3 393 aa17.19■□□□□ 0.34
SMARCD2-211ENST00000584483 SBF1O95248 1867 aa17.18■□□□□ 0.34
SMARCD2-211ENST00000584483 FKBP1AP62942 108 aaKnown RBP17.18■□□□□ 0.34
SMARCD2-211ENST00000584483 GSG1L2A8MUP6 293 aa17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 F8W031 263 aaPredicted RBP17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 IGSF3O75054 1194 aa17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 RAD17O75943 681 aa17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 COL9A3Q14050 684 aaPredicted RBP17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 DZIP1Q86YF9 867 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 AIDAQ96BJ3 306 aa17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 IL17RAQ96F46 866 aa17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 EPB41L4AQ9HCS5 686 aaPredicted RBP17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 ZNRF3Q9ULT6 936 aa17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 SNX14Q9Y5W7 946 aa17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 GOLGB1Q14789 3259 aaKnown RBP17.17■□□□□ 0.34
SMARCD2-211ENST00000584483 CDK5RAP2Q96SN8 1893 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 MAGEB6P1A0A0J9YX57 407 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 PSMD14O00487 310 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 SLC27A2O14975 620 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 FGAP02671 866 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 VIL1P09327 827 aaKnown RBP17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 CREB3L3Q68CJ9 461 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 NIM1KQ8IY84 436 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 FAM163AQ96GL9 167 aaPredicted RBP17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 GMLQ99445 158 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 AATFQ9NY61 560 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 SUGT1Q9Y2Z0 365 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 MROH7-TTC4A0A0A0MT08 1334 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 GAKO14976 1311 aa17.16■□□□□ 0.34
SMARCD2-211ENST00000584483 DICER1Q9UPY3 1922 aaKnown RBP17.15■□□□□ 0.34
SMARCD2-211ENST00000584483 SCNN1DP51172 638 aa17.15■□□□□ 0.34
SMARCD2-211ENST00000584483 PPP4CP60510 307 aa17.15■□□□□ 0.34
SMARCD2-211ENST00000584483 CXCL9Q07325 125 aa17.15■□□□□ 0.34
SMARCD2-211ENST00000584483 TTF2Q9UNY4 1162 aaKnown RBP17.15■□□□□ 0.34
SMARCD2-211ENST00000584483 PCDHAC2Q9Y5I4 1007 aa17.15■□□□□ 0.34
SMARCD2-211ENST00000584483 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
SMARCD2-211ENST00000584483 GPR75-ASB3A0A0A6YYF3 556 aa17.14■□□□□ 0.33
SMARCD2-211ENST00000584483 PATL2C9JE40 543 aaKnown RBP17.14■□□□□ 0.33
SMARCD2-211ENST00000584483 CYP21A2P08686 494 aa17.14■□□□□ 0.33
SMARCD2-211ENST00000584483 GSTO1P78417 241 aa17.14■□□□□ 0.33
SMARCD2-211ENST00000584483 ADCK5Q3MIX3 580 aa17.14■□□□□ 0.33
SMARCD2-211ENST00000584483 RSBN1LQ6PCB5 846 aaPredicted RBP17.14■□□□□ 0.33
SMARCD2-211ENST00000584483 TMED8Q6PL24 325 aaPredicted RBP17.14■□□□□ 0.33
SMARCD2-211ENST00000584483 KIAA0825Q8IV33 1275 aa17.14■□□□□ 0.33
SMARCD2-211ENST00000584483 DAGLAQ9Y4D2 1042 aa17.14■□□□□ 0.33
SMARCD2-211ENST00000584483 LDHCP07864 332 aa17.13■□□□□ 0.33
SMARCD2-211ENST00000584483 RHBDL3P58872 404 aa17.13■□□□□ 0.33
SMARCD2-211ENST00000584483 ALX1Q15699 326 aa17.13■□□□□ 0.33
SMARCD2-211ENST00000584483 IFNL3Q8IZI9 196 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms