RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 SPDYE2Q495Y8 402 aa26.65■■□□□ 1.86
PPP4R1-228ENST00000584074 ZNF70Q9UC06 446 aaPredicted RBP26.65■■□□□ 1.86
PPP4R1-228ENST00000584074 PPP2R3BQ9Y5P8 575 aa26.65■■□□□ 1.86
PPP4R1-228ENST00000584074 RASA3Q14644 834 aa26.64■■□□□ 1.86
PPP4R1-228ENST00000584074 PNMA6EA0A0J9YXQ4 647 aa26.63■■□□□ 1.85
PPP4R1-228ENST00000584074 RLBP1P12271 317 aa26.63■■□□□ 1.85
PPP4R1-228ENST00000584074 ADORA1P30542 326 aa26.63■■□□□ 1.85
PPP4R1-228ENST00000584074 HDLBPQ00341 1268 aaKnown RBP26.63■■□□□ 1.85
PPP4R1-228ENST00000584074 ARMC9Q7Z3E5 817 aa26.63■■□□□ 1.85
PPP4R1-228ENST00000584074 FTSJ3Q8IY81 847 aaKnown RBP26.63■■□□□ 1.85
PPP4R1-228ENST00000584074 CSRNP1Q96S65 589 aa26.63■■□□□ 1.85
PPP4R1-228ENST00000584074 PHKA1P46020 1223 aa26.62■■□□□ 1.85
PPP4R1-228ENST00000584074 TIMM10P62072 90 aa26.62■■□□□ 1.85
PPP4R1-228ENST00000584074 TFCP2Q12800 502 aa26.62■■□□□ 1.85
PPP4R1-228ENST00000584074 NBPF12Q5TAG4 269 aaPredicted RBP26.62■■□□□ 1.85
PPP4R1-228ENST00000584074 WDR66Q8TBY9 1149 aa26.62■■□□□ 1.85
PPP4R1-228ENST00000584074 TEKT1Q969V4 418 aa26.62■■□□□ 1.85
PPP4R1-228ENST00000584074 GNL3LQ9NVN8 582 aaKnown RBP26.62■■□□□ 1.85
PPP4R1-228ENST00000584074 ANGEL1Q9UNK9 670 aaKnown RBP26.62■■□□□ 1.85
PPP4R1-228ENST00000584074 SSC5DA1L4H1 1573 aa26.62■■□□□ 1.85
PPP4R1-228ENST00000584074 ECM29Q5VYK3 1845 aa26.61■■□□□ 1.85
PPP4R1-228ENST00000584074 LDLRAD1Q5T700 205 aa26.61■■□□□ 1.85
PPP4R1-228ENST00000584074 SUGT1Q9Y2Z0 365 aa26.61■■□□□ 1.85
PPP4R1-228ENST00000584074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.61■■□□□ 1.85
PPP4R1-228ENST00000584074 SUPT20HL1Q3ZLR7 823 aa26.6■■□□□ 1.85
PPP4R1-228ENST00000584074 TCP10L2B9ZVM9 353 aa26.59■■□□□ 1.85
PPP4R1-228ENST00000584074 CAPN15O75808 1086 aa26.59■■□□□ 1.85
PPP4R1-228ENST00000584074 TNFAIP1Q13829 316 aa26.59■■□□□ 1.85
PPP4R1-228ENST00000584074 ITPRIPQ8IWB1 547 aa26.59■■□□□ 1.85
PPP4R1-228ENST00000584074 ZDHHC15Q96MV8 337 aa26.59■■□□□ 1.85
PPP4R1-228ENST00000584074 MRIQ9BWK5 157 aa26.59■■□□□ 1.85
PPP4R1-228ENST00000584074 A0A1B0GUL7 405 aa26.58■■□□□ 1.85
PPP4R1-228ENST00000584074 CCDC102BQ68D86 513 aa26.58■■□□□ 1.85
PPP4R1-228ENST00000584074 C1orf115Q9H7X2 142 aa26.58■■□□□ 1.85
PPP4R1-228ENST00000584074 RNF186Q9NXI6 227 aa26.58■■□□□ 1.85
PPP4R1-228ENST00000584074 MAST3O60307 1309 aa26.58■■□□□ 1.85
PPP4R1-228ENST00000584074 PPP1R12BO60237 982 aaPredicted RBP26.57■■□□□ 1.84
PPP4R1-228ENST00000584074 CACNB3P54284 484 aa26.57■■□□□ 1.84
PPP4R1-228ENST00000584074 MKRN3Q13064 507 aaKnown RBP26.57■■□□□ 1.84
PPP4R1-228ENST00000584074 APOBEC3HQ6NTF7 200 aaKnown RBP26.57■■□□□ 1.84
PPP4R1-228ENST00000584074 CDAN1Q8IWY9 1227 aa26.57■■□□□ 1.84
PPP4R1-228ENST00000584074 DENND2AQ9ULE3 1009 aa26.57■■□□□ 1.84
PPP4R1-228ENST00000584074 AKAP2Q9Y2D5 859 aa26.57■■□□□ 1.84
PPP4R1-228ENST00000584074 ZBTB7BO15156 539 aaPredicted RBP26.56■■□□□ 1.84
PPP4R1-228ENST00000584074 TRPA1O75762 1119 aa26.56■■□□□ 1.84
PPP4R1-228ENST00000584074 MAP3K11Q16584 847 aa26.56■■□□□ 1.84
PPP4R1-228ENST00000584074 HHIPL2Q6UWX4 724 aa26.56■■□□□ 1.84
PPP4R1-228ENST00000584074 XAGE2Q96GT9 111 aa26.56■■□□□ 1.84
PPP4R1-228ENST00000584074 TEPSINQ96N21 525 aa26.56■■□□□ 1.84
PPP4R1-228ENST00000584074 TMEM39BQ9GZU3 492 aa26.56■■□□□ 1.84
PPP4R1-228ENST00000584074 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.56■■□□□ 1.84
PPP4R1-228ENST00000584074 SEMA3EO15041 775 aa26.55■■□□□ 1.84
PPP4R1-228ENST00000584074 PRDX5P30044 214 aa26.55■■□□□ 1.84
PPP4R1-228ENST00000584074 G3BP1Q13283 466 aaKnown RBP eCLIP26.55■■□□□ 1.84
PPP4R1-228ENST00000584074 REM2Q8IYK8 340 aaPredicted RBP26.55■■□□□ 1.84
PPP4R1-228ENST00000584074 PANK1Q8TE04 598 aa26.55■■□□□ 1.84
PPP4R1-228ENST00000584074 CLMNQ96JQ2 1002 aa26.55■■□□□ 1.84
PPP4R1-228ENST00000584074 SAGE1Q9NXZ1 904 aa26.55■■□□□ 1.84
PPP4R1-228ENST00000584074 USP2O75604 605 aaPredicted RBP26.54■■□□□ 1.84
PPP4R1-228ENST00000584074 TNNI2P48788 182 aa26.54■■□□□ 1.84
PPP4R1-228ENST00000584074 POLA2Q14181 598 aa26.54■■□□□ 1.84
PPP4R1-228ENST00000584074 DIXDC1Q155Q3 683 aa26.54■■□□□ 1.84
PPP4R1-228ENST00000584074 NEUROD6Q96NK8 337 aa26.54■■□□□ 1.84
PPP4R1-228ENST00000584074 LDHBP07195 334 aaKnown RBP26.53■■□□□ 1.84
PPP4R1-228ENST00000584074 ATP8B2P98198 1209 aa26.53■■□□□ 1.84
PPP4R1-228ENST00000584074 RASGRF1Q13972 1273 aa26.53■■□□□ 1.84
PPP4R1-228ENST00000584074 SSH3Q8TE77 659 aa26.53■■□□□ 1.84
PPP4R1-228ENST00000584074 SLC10A4Q96EP9 437 aa26.53■■□□□ 1.84
PPP4R1-228ENST00000584074 SALL1Q9NSC2 1324 aa26.53■■□□□ 1.84
PPP4R1-228ENST00000584074 MVPQ14764 893 aaKnown RBP26.52■■□□□ 1.84
PPP4R1-228ENST00000584074 SPRYD7Q5W111 196 aa26.52■■□□□ 1.84
PPP4R1-228ENST00000584074 DAGLAQ9Y4D2 1042 aa26.52■■□□□ 1.84
PPP4R1-228ENST00000584074 ZBTB22O15209 634 aa26.51■■□□□ 1.83
PPP4R1-228ENST00000584074 IREB2P48200 963 aaKnown RBP26.51■■□□□ 1.83
PPP4R1-228ENST00000584074 TMOD2Q9NZR1 351 aa26.51■■□□□ 1.83
PPP4R1-228ENST00000584074 MYH13Q9UKX3 1938 aa26.51■■□□□ 1.83
PPP4R1-228ENST00000584074 TM4SF4P48230 202 aa26.49■■□□□ 1.83
PPP4R1-228ENST00000584074 FKBP1CQ5VVH2 108 aa26.49■■□□□ 1.83
PPP4R1-228ENST00000584074 UNCXA6NJT0 531 aa26.48■■□□□ 1.83
PPP4R1-228ENST00000584074 GORABQ5T7V8 394 aa26.48■■□□□ 1.83
PPP4R1-228ENST00000584074 FAM83AQ86UY5 434 aa26.48■■□□□ 1.83
PPP4R1-228ENST00000584074 ZGPATQ8N5A5 531 aaKnown RBP26.48■■□□□ 1.83
PPP4R1-228ENST00000584074 PDS5AQ29RF7 1337 aaKnown RBP26.47■■□□□ 1.83
PPP4R1-228ENST00000584074 SURF6O75683 361 aaKnown RBP26.47■■□□□ 1.83
PPP4R1-228ENST00000584074 OS9Q13438 667 aaPredicted RBP26.47■■□□□ 1.83
PPP4R1-228ENST00000584074 CDC42EP5Q6NZY7 148 aa26.47■■□□□ 1.83
PPP4R1-228ENST00000584074 ANKRD13AQ8IZ07 590 aa26.47■■□□□ 1.83
PPP4R1-228ENST00000584074 WNK4Q96J92 1243 aa26.47■■□□□ 1.83
PPP4R1-228ENST00000584074 ABCF2Q9UG63 623 aa26.47■■□□□ 1.83
PPP4R1-228ENST00000584074 SREBF2Q12772 1141 aa26.46■■□□□ 1.83
PPP4R1-228ENST00000584074 HMG20BQ9P0W2 317 aa26.46■■□□□ 1.83
PPP4R1-228ENST00000584074 PI16Q6UXB8 463 aa26.45■■□□□ 1.82
PPP4R1-228ENST00000584074 RCAN3Q9UKA8 241 aa26.45■■□□□ 1.82
PPP4R1-228ENST00000584074 ZBTB48P10074 688 aaPredicted RBP26.44■■□□□ 1.82
PPP4R1-228ENST00000584074 MS4A1P11836 297 aa26.44■■□□□ 1.82
PPP4R1-228ENST00000584074 GJA5P36382 358 aa26.44■■□□□ 1.82
PPP4R1-228ENST00000584074 CEP85Q6P2H3 762 aa26.44■■□□□ 1.82
PPP4R1-228ENST00000584074 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.44■■□□□ 1.82
PPP4R1-228ENST00000584074 DZIP1Q86YF9 867 aaKnown RBP26.44■■□□□ 1.82
PPP4R1-228ENST00000584074 ABHD8Q96I13 439 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms