RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	DZIP1L	Q8IYY4	767 aa	Known RBP	19.05	■□□□□ 0.64
SREBF1-222	ENST00000583732	CFHR5	Q9BXR6	569 aa		19.05	■□□□□ 0.64
SREBF1-222	ENST00000583732	ELP3	Q9H9T3	547 aa		19.05	■□□□□ 0.64
SREBF1-222	ENST00000583732	ANKRD13A	Q8IZ07	590 aa		19.04	■□□□□ 0.64
SREBF1-222	ENST00000583732	SSH1	Q8WYL5	1049 aa		19.04	■□□□□ 0.64
SREBF1-222	ENST00000583732	PTPRC	P08575	1304 aa		19.03	■□□□□ 0.64
SREBF1-222	ENST00000583732	INHBE	P58166	350 aa		19.03	■□□□□ 0.64
SREBF1-222	ENST00000583732	FBXO33	Q7Z6M2	555 aa		19.03	■□□□□ 0.64
SREBF1-222	ENST00000583732	TMEM39B	Q9GZU3	492 aa		19.03	■□□□□ 0.64
SREBF1-222	ENST00000583732	CACNB3	P54284	484 aa		19.02	■□□□□ 0.64
SREBF1-222	ENST00000583732	CAVIN4	Q5BKX8	364 aa		19.02	■□□□□ 0.64
SREBF1-222	ENST00000583732	OPTN	Q96CV9	577 aa		19.02	■□□□□ 0.64
SREBF1-222	ENST00000583732	TRIM17	Q9Y577	477 aa		19.02	■□□□□ 0.64
SREBF1-222	ENST00000583732		E9PSI1	815 aa		19.01	■□□□□ 0.63
SREBF1-222	ENST00000583732	PDE8B	O95263	885 aa		19.01	■□□□□ 0.63
SREBF1-222	ENST00000583732	SLC34A2	O95436	690 aa		19.01	■□□□□ 0.63
SREBF1-222	ENST00000583732	TNNI2	P48788	182 aa		19.01	■□□□□ 0.63
SREBF1-222	ENST00000583732	VGLL2	Q8N8G2	317 aa		19.01	■□□□□ 0.63
SREBF1-222	ENST00000583732	TEPSIN	Q96N21	525 aa		19.01	■□□□□ 0.63
SREBF1-222	ENST00000583732	UNCX	A6NJT0	531 aa		19	■□□□□ 0.63
SREBF1-222	ENST00000583732	BCAM	P50895	628 aa		19	■□□□□ 0.63
SREBF1-222	ENST00000583732	CRHR2	Q13324	411 aa		19	■□□□□ 0.63
SREBF1-222	ENST00000583732	CD99L2	Q8TCZ2	262 aa		19	■□□□□ 0.63
SREBF1-222	ENST00000583732	CNKSR2	Q8WXI2	1034 aa		19	■□□□□ 0.63
SREBF1-222	ENST00000583732	OTUD7B	Q6GQQ9	843 aa		18.99	■□□□□ 0.63
SREBF1-222	ENST00000583732	OTOP1	Q7RTM1	612 aa		18.99	■□□□□ 0.63
SREBF1-222	ENST00000583732	TBC1D22A	Q8WUA7	517 aa		18.99	■□□□□ 0.63
SREBF1-222	ENST00000583732	TEKT1	Q969V4	418 aa		18.99	■□□□□ 0.63
SREBF1-222	ENST00000583732	USP44	Q9H0E7	712 aa		18.99	■□□□□ 0.63
SREBF1-222	ENST00000583732	SLFN5	Q08AF3	891 aa		18.98	■□□□□ 0.63
SREBF1-222	ENST00000583732	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	18.98	■□□□□ 0.63
SREBF1-222	ENST00000583732	PTPN18	Q99952	460 aa		18.98	■□□□□ 0.63
SREBF1-222	ENST00000583732	IFIT1	P09914	478 aa	Known RBP	18.97	■□□□□ 0.63
SREBF1-222	ENST00000583732	VGLL4	Q14135	290 aa		18.97	■□□□□ 0.63
SREBF1-222	ENST00000583732	PUM3	Q15397	648 aa	Known RBP	18.97	■□□□□ 0.63
SREBF1-222	ENST00000583732	CDCA7L	Q96GN5	454 aa		18.97	■□□□□ 0.63
SREBF1-222	ENST00000583732	ERO1A	Q96HE7	468 aa		18.97	■□□□□ 0.63
SREBF1-222	ENST00000583732	SMC4	Q9NTJ3	1288 aa		18.97	■□□□□ 0.63
SREBF1-222	ENST00000583732	TMOD2	Q9NZR1	351 aa		18.97	■□□□□ 0.63
SREBF1-222	ENST00000583732	MAP3K9	P80192	1104 aa		18.96	■□□□□ 0.63
SREBF1-222	ENST00000583732	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	18.96	■□□□□ 0.63
SREBF1-222	ENST00000583732	OTUD5	Q96G74	571 aa		18.96	■□□□□ 0.63
SREBF1-222	ENST00000583732	CSAD	Q9Y600	493 aa		18.96	■□□□□ 0.63
SREBF1-222	ENST00000583732	CCL15-CCL14	A0A0B4J2E2	113 aa		18.95	■□□□□ 0.62
SREBF1-222	ENST00000583732	TESPA1	A2RU30	521 aa	Predicted RBP	18.95	■□□□□ 0.62
SREBF1-222	ENST00000583732	EYA2	O00167	538 aa		18.95	■□□□□ 0.62
SREBF1-222	ENST00000583732	SLC5A1	P13866	664 aa		18.95	■□□□□ 0.62
SREBF1-222	ENST00000583732	FGFR2	P21802	821 aa		18.95	■□□□□ 0.62
SREBF1-222	ENST00000583732	RFX5	P48382	616 aa	Predicted RBP	18.95	■□□□□ 0.62
SREBF1-222	ENST00000583732	HDLBP	Q00341	1268 aa	Known RBP	18.95	■□□□□ 0.62
SREBF1-222	ENST00000583732	CCL15	Q16663	113 aa		18.95	■□□□□ 0.62
SREBF1-222	ENST00000583732	SIL1	Q9H173	461 aa		18.95	■□□□□ 0.62
SREBF1-222	ENST00000583732	PDE4DIP	Q5VU43	2346 aa		18.94	■□□□□ 0.62
SREBF1-222	ENST00000583732	ALDH1L2	Q3SY69	923 aa		18.94	■□□□□ 0.62
SREBF1-222	ENST00000583732	BRI3BP	Q8WY22	251 aa		18.94	■□□□□ 0.62
SREBF1-222	ENST00000583732	MS4A4A	Q96JQ5	239 aa		18.94	■□□□□ 0.62
SREBF1-222	ENST00000583732	ZDHHC15	Q96MV8	337 aa		18.94	■□□□□ 0.62
SREBF1-222	ENST00000583732	MAST3	O60307	1309 aa		18.94	■□□□□ 0.62
SREBF1-222	ENST00000583732	ZSWIM8	A7E2V4	1837 aa		18.93	■□□□□ 0.62
SREBF1-222	ENST00000583732	SP3	Q02447	781 aa		18.93	■□□□□ 0.62
SREBF1-222	ENST00000583732	TAF1C	Q15572	869 aa	Predicted RBP	18.93	■□□□□ 0.62
SREBF1-222	ENST00000583732	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.93	■□□□□ 0.62
SREBF1-222	ENST00000583732	WRNIP1	Q96S55	665 aa		18.93	■□□□□ 0.62
SREBF1-222	ENST00000583732	EFCC1	Q9HA90	598 aa		18.93	■□□□□ 0.62
SREBF1-222	ENST00000583732	AK9	Q5TCS8	1911 aa		18.93	■□□□□ 0.62
SREBF1-222	ENST00000583732	KIF16B	Q96L93	1317 aa		18.93	■□□□□ 0.62
SREBF1-222	ENST00000583732	UBTFL1	P0CB47	393 aa	Predicted RBP	18.92	■□□□□ 0.62
SREBF1-222	ENST00000583732	GTF2A2	P52657	109 aa		18.92	■□□□□ 0.62
SREBF1-222	ENST00000583732	CAP1	Q01518	475 aa		18.92	■□□□□ 0.62
SREBF1-222	ENST00000583732	PRPF38B	Q5VTL8	546 aa	Known RBP	18.92	■□□□□ 0.62
SREBF1-222	ENST00000583732	LPIN2	Q92539	896 aa		18.92	■□□□□ 0.62
SREBF1-222	ENST00000583732	ZKSCAN4	Q969J2	545 aa	Predicted RBP	18.92	■□□□□ 0.62
SREBF1-222	ENST00000583732	PTPN22	Q9Y2R2	807 aa		18.92	■□□□□ 0.62
SREBF1-222	ENST00000583732	SNCAIP	Q9Y6H5	919 aa		18.92	■□□□□ 0.62
SREBF1-222	ENST00000583732	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.91	■□□□□ 0.62
SREBF1-222	ENST00000583732	POTEF	A5A3E0	1075 aa		18.91	■□□□□ 0.62
SREBF1-222	ENST00000583732	ATG9A	Q7Z3C6	839 aa		18.91	■□□□□ 0.62
SREBF1-222	ENST00000583732	FAM43A	Q8N2R8	423 aa		18.91	■□□□□ 0.62
SREBF1-222	ENST00000583732	SPDYE5	A6NIY4	337 aa		18.9	■□□□□ 0.62
SREBF1-222	ENST00000583732	DIXDC1	Q155Q3	683 aa		18.9	■□□□□ 0.62
SREBF1-222	ENST00000583732	ATP2B3	Q16720	1220 aa		18.9	■□□□□ 0.62
SREBF1-222	ENST00000583732	FAM83A	Q86UY5	434 aa		18.9	■□□□□ 0.62
SREBF1-222	ENST00000583732	WDR66	Q8TBY9	1149 aa		18.9	■□□□□ 0.62
SREBF1-222	ENST00000583732	ZFYVE28	Q9HCC9	887 aa		18.9	■□□□□ 0.62
SREBF1-222	ENST00000583732	NOB1	Q9ULX3	412 aa	Known RBP	18.9	■□□□□ 0.62
SREBF1-222	ENST00000583732	SUGT1	Q9Y2Z0	365 aa		18.9	■□□□□ 0.62
SREBF1-222	ENST00000583732	HTT	P42858	3142 aa		18.89	■□□□□ 0.62
SREBF1-222	ENST00000583732	HHIPL2	Q6UWX4	724 aa		18.89	■□□□□ 0.61
SREBF1-222	ENST00000583732	MIGA2	Q7L4E1	593 aa		18.89	■□□□□ 0.61
SREBF1-222	ENST00000583732	MRI	Q9BWK5	157 aa		18.89	■□□□□ 0.61
SREBF1-222	ENST00000583732	DAGLA	Q9Y4D2	1042 aa		18.89	■□□□□ 0.61
SREBF1-222	ENST00000583732	LRRFIP2	Q9Y608	721 aa	Known RBP	18.89	■□□□□ 0.61
SREBF1-222	ENST00000583732	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.89	■□□□□ 0.61
SREBF1-222	ENST00000583732	PRDX5	P30044	214 aa		18.88	■□□□□ 0.61
SREBF1-222	ENST00000583732	TCP10	Q12799	353 aa		18.88	■□□□□ 0.61
SREBF1-222	ENST00000583732	FKBP1C	Q5VVH2	108 aa		18.88	■□□□□ 0.61
SREBF1-222	ENST00000583732	DCAF15	Q66K64	600 aa		18.88	■□□□□ 0.61
SREBF1-222	ENST00000583732	ERO1B	Q86YB8	467 aa		18.88	■□□□□ 0.61
SREBF1-222	ENST00000583732	HOOK2	Q96ED9	719 aa		18.88	■□□□□ 0.61
SREBF1-222	ENST00000583732	PA2G4	Q9UQ80	394 aa	Known RBP	18.88	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms