RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 FAM84BQ96KN1 310 aaPredicted RBP18.74■□□□□ 0.59
CDK5RAP3-226ENST00000583182 PUS3Q9BZE2 481 aaKnown RBP18.74■□□□□ 0.59
CDK5RAP3-226ENST00000583182 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
CDK5RAP3-226ENST00000583182 HIBADHP31937 336 aaKnown RBP18.73■□□□□ 0.59
CDK5RAP3-226ENST00000583182 DZIP1LQ8IYY4 767 aaKnown RBP18.73■□□□□ 0.59
CDK5RAP3-226ENST00000583182 GCC1Q96CN9 775 aa18.73■□□□□ 0.59
CDK5RAP3-226ENST00000583182 C9orf78Q9NZ63 289 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-226ENST00000583182 TCP10L2B9ZVM9 353 aa18.72■□□□□ 0.59
CDK5RAP3-226ENST00000583182 EN2P19622 333 aaPredicted RBP18.72■□□□□ 0.59
CDK5RAP3-226ENST00000583182 CRKP46108 304 aa18.72■□□□□ 0.59
CDK5RAP3-226ENST00000583182 GRIK5Q16478 980 aa18.72■□□□□ 0.59
CDK5RAP3-226ENST00000583182 BRI3BPQ8WY22 251 aa18.72■□□□□ 0.59
CDK5RAP3-226ENST00000583182 KAZALD1Q96I82 304 aa18.72■□□□□ 0.59
CDK5RAP3-226ENST00000583182 TMEM39BQ9GZU3 492 aa18.72■□□□□ 0.59
CDK5RAP3-226ENST00000583182 VGLL4Q14135 290 aa18.71■□□□□ 0.59
CDK5RAP3-226ENST00000583182 SUCLG2Q96I99 432 aa18.71■□□□□ 0.59
CDK5RAP3-226ENST00000583182 ALDH1L1O75891 902 aa18.7■□□□□ 0.58
CDK5RAP3-226ENST00000583182 HABP4Q5JVS0 413 aaKnown RBP18.7■□□□□ 0.58
CDK5RAP3-226ENST00000583182 SLC4A10Q6U841 1118 aa18.7■□□□□ 0.58
CDK5RAP3-226ENST00000583182 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.7■□□□□ 0.58
CDK5RAP3-226ENST00000583182 MRS2Q9HD23 443 aa18.7■□□□□ 0.58
CDK5RAP3-226ENST00000583182 RIPOR2Q9Y4F9 1068 aa18.7■□□□□ 0.58
CDK5RAP3-226ENST00000583182 CCL15-CCL14A0A0B4J2E2 113 aa18.69■□□□□ 0.58
CDK5RAP3-226ENST00000583182 MAP3K9P80192 1104 aa18.69■□□□□ 0.58
CDK5RAP3-226ENST00000583182 TAF1CQ15572 869 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-226ENST00000583182 CCL15Q16663 113 aa18.69■□□□□ 0.58
CDK5RAP3-226ENST00000583182 FAM43AQ8N2R8 423 aa18.69■□□□□ 0.58
CDK5RAP3-226ENST00000583182 SRCIN1Q9C0H9 1055 aa18.69■□□□□ 0.58
CDK5RAP3-226ENST00000583182 IQSEC3Q9UPP2 1182 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-226ENST00000583182 ZSWIM8A7E2V4 1837 aa18.68■□□□□ 0.58
CDK5RAP3-226ENST00000583182 NBPF7P0C2Y1 421 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP3-226ENST00000583182 TNNI2P48788 182 aa18.68■□□□□ 0.58
CDK5RAP3-226ENST00000583182 GTF2A2P52657 109 aa18.68■□□□□ 0.58
CDK5RAP3-226ENST00000583182 FBXO33Q7Z6M2 555 aa18.68■□□□□ 0.58
CDK5RAP3-226ENST00000583182 OTUD5Q96G74 571 aa18.68■□□□□ 0.58
CDK5RAP3-226ENST00000583182 ZNF333Q96JL9 665 aa18.68■□□□□ 0.58
CDK5RAP3-226ENST00000583182 PTCH2Q9Y6C5 1203 aa18.68■□□□□ 0.58
CDK5RAP3-226ENST00000583182 CACNB3P54284 484 aa18.67■□□□□ 0.58
CDK5RAP3-226ENST00000583182 CHAF1AQ13111 956 aaPredicted RBP18.67■□□□□ 0.58
CDK5RAP3-226ENST00000583182 ZFYVE28Q9HCC9 887 aa18.67■□□□□ 0.58
CDK5RAP3-226ENST00000583182 CSADQ9Y600 493 aa18.67■□□□□ 0.58
CDK5RAP3-226ENST00000583182 MROH5Q6ZUA9 1318 aa18.67■□□□□ 0.58
CDK5RAP3-226ENST00000583182 SPDYE5A6NIY4 337 aa18.66■□□□□ 0.58
CDK5RAP3-226ENST00000583182 LRRC24Q50LG9 513 aa18.66■□□□□ 0.58
CDK5RAP3-226ENST00000583182 SNCAIPQ9Y6H5 919 aa18.66■□□□□ 0.58
CDK5RAP3-226ENST00000583182 HDLBPQ00341 1268 aaKnown RBP18.65■□□□□ 0.58
CDK5RAP3-226ENST00000583182 SLC9C1Q4G0N8 1177 aa18.65■□□□□ 0.58
CDK5RAP3-226ENST00000583182 VPS37DQ86XT2 251 aa18.65■□□□□ 0.58
CDK5RAP3-226ENST00000583182 TMEM106CQ9BVX2 250 aa18.65■□□□□ 0.58
CDK5RAP3-226ENST00000583182 BICC1Q9H694 974 aaKnown RBP18.65■□□□□ 0.58
CDK5RAP3-226ENST00000583182 UTYO14607 1347 aa18.65■□□□□ 0.58
CDK5RAP3-226ENST00000583182 RABL6Q3YEC7 729 aaPredicted RBP18.64■□□□□ 0.57
CDK5RAP3-226ENST00000583182 VGLL2Q8N8G2 317 aa18.64■□□□□ 0.57
CDK5RAP3-226ENST00000583182 TEKT1Q969V4 418 aa18.64■□□□□ 0.57
CDK5RAP3-226ENST00000583182 ARHGAP39Q9C0H5 1083 aa18.64■□□□□ 0.57
CDK5RAP3-226ENST00000583182 ARHGEF6Q15052 776 aa18.63■□□□□ 0.57
CDK5RAP3-226ENST00000583182 METTL24Q5JXM2 366 aa18.63■□□□□ 0.57
CDK5RAP3-226ENST00000583182 ANKRD44Q8N8A2 993 aa18.63■□□□□ 0.57
CDK5RAP3-226ENST00000583182 TBC1D22AQ8WUA7 517 aa18.63■□□□□ 0.57
CDK5RAP3-226ENST00000583182 ZKSCAN4Q969J2 545 aaPredicted RBP18.63■□□□□ 0.57
CDK5RAP3-226ENST00000583182 BTBD19C9JJ37 291 aa18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 TLR2O60603 784 aa18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 FRAT2O75474 233 aaPredicted RBP18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 PDE8BO95263 885 aa18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 CETPP11597 493 aa18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 BCAMP50895 628 aa18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 CAVIN4Q5BKX8 364 aa18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 APOBEC3HQ6NTF7 200 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 NBPF11Q86T75 865 aa18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 ERO1BQ86YB8 467 aa18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 ZDHHC15Q96MV8 337 aa18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 WRNIP1Q96S55 665 aa18.62■□□□□ 0.57
CDK5RAP3-226ENST00000583182 IRF6O14896 467 aa18.61■□□□□ 0.57
CDK5RAP3-226ENST00000583182 MYCP01106 439 aaPredicted RBP18.61■□□□□ 0.57
CDK5RAP3-226ENST00000583182 FAM83AQ86UY5 434 aa18.61■□□□□ 0.57
CDK5RAP3-226ENST00000583182 KLHDC4Q8TBB5 520 aa18.61■□□□□ 0.57
CDK5RAP3-226ENST00000583182 MRIQ9BWK5 157 aa18.61■□□□□ 0.57
CDK5RAP3-226ENST00000583182 LACTBP83111 547 aaPredicted RBP18.6■□□□□ 0.57
CDK5RAP3-226ENST00000583182 SLC4A8Q2Y0W8 1093 aa18.6■□□□□ 0.57
CDK5RAP3-226ENST00000583182 FKBP1CQ5VVH2 108 aa18.6■□□□□ 0.57
CDK5RAP3-226ENST00000583182 SH3TC2Q8TF17 1288 aa18.6■□□□□ 0.57
CDK5RAP3-226ENST00000583182 ZCCHC17Q9NP64 241 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-226ENST00000583182 TMOD2Q9NZR1 351 aa18.6■□□□□ 0.57
CDK5RAP3-226ENST00000583182 MYH13Q9UKX3 1938 aa18.6■□□□□ 0.57
CDK5RAP3-226ENST00000583182 FXR1P51114 621 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDK5RAP3-226ENST00000583182 PPIL2Q13356 520 aa18.59■□□□□ 0.57
CDK5RAP3-226ENST00000583182 SNAPC2Q13487 334 aa18.59■□□□□ 0.57
CDK5RAP3-226ENST00000583182 RPAP1Q9BWH6 1393 aaPredicted RBP18.58■□□□□ 0.57
CDK5RAP3-226ENST00000583182 WDHD1O75717 1129 aaPredicted RBP18.58■□□□□ 0.56
CDK5RAP3-226ENST00000583182 FGFR2P21802 821 aa18.58■□□□□ 0.56
CDK5RAP3-226ENST00000583182 HHIPL2Q6UWX4 724 aa18.58■□□□□ 0.56
CDK5RAP3-226ENST00000583182 MIGA2Q7L4E1 593 aa18.58■□□□□ 0.56
CDK5RAP3-226ENST00000583182 SUGT1Q9Y2Z0 365 aa18.58■□□□□ 0.56
CDK5RAP3-226ENST00000583182 MAST3O60307 1309 aa18.57■□□□□ 0.56
CDK5RAP3-226ENST00000583182 ECM2O94769 699 aaPredicted RBP18.57■□□□□ 0.56
CDK5RAP3-226ENST00000583182 CTGFP29279 349 aa18.57■□□□□ 0.56
CDK5RAP3-226ENST00000583182 INPP5BP32019 993 aa18.57■□□□□ 0.56
CDK5RAP3-226ENST00000583182 KIF22Q14807 665 aa18.57■□□□□ 0.56
CDK5RAP3-226ENST00000583182 DCAF15Q66K64 600 aa18.57■□□□□ 0.56
CDK5RAP3-226ENST00000583182 MRPL50Q8N5N7 158 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms