RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	TDRD7	Q8NHU6	1098 aa	Known RBP	12.07	□□□□□ -0.48
DDX42-215	ENST00000582985	SUCLG2	Q96I99	432 aa		12.07	□□□□□ -0.48
DDX42-215	ENST00000582985	SRCIN1	Q9C0H9	1055 aa		12.07	□□□□□ -0.48
DDX42-215	ENST00000582985	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
DDX42-215	ENST00000582985	USP2	O75604	605 aa	Predicted RBP	12.06	□□□□□ -0.48
DDX42-215	ENST00000582985	HIBADH	P31937	336 aa	Known RBP	12.06	□□□□□ -0.48
DDX42-215	ENST00000582985	GYG1	P46976	350 aa		12.06	□□□□□ -0.48
DDX42-215	ENST00000582985	KAZALD1	Q96I82	304 aa		12.06	□□□□□ -0.48
DDX42-215	ENST00000582985	FAM84B	Q96KN1	310 aa	Predicted RBP	12.06	□□□□□ -0.48
DDX42-215	ENST00000582985	PUS3	Q9BZE2	481 aa	Known RBP	12.06	□□□□□ -0.48
DDX42-215	ENST00000582985	ZNF70	Q9UC06	446 aa	Predicted RBP	12.06	□□□□□ -0.48
DDX42-215	ENST00000582985	SERPINA10	Q9UK55	444 aa		12.06	□□□□□ -0.48
DDX42-215	ENST00000582985	TTF2	Q9UNY4	1162 aa	Known RBP	12.06	□□□□□ -0.48
DDX42-215	ENST00000582985	LAMB1	P07942	1786 aa		12.05	□□□□□ -0.48
DDX42-215	ENST00000582985	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.05	□□□□□ -0.48
DDX42-215	ENST00000582985	GJA5	P36382	358 aa		12.05	□□□□□ -0.48
DDX42-215	ENST00000582985	TNFAIP1	Q13829	316 aa		12.05	□□□□□ -0.48
DDX42-215	ENST00000582985	ANKRD13A	Q8IZ07	590 aa		12.05	□□□□□ -0.48
DDX42-215	ENST00000582985	TDRD3	Q9H7E2	651 aa	Known RBP	12.05	□□□□□ -0.48
DDX42-215	ENST00000582985	RIPOR2	Q9Y4F9	1068 aa		12.05	□□□□□ -0.48
DDX42-215	ENST00000582985	ZEB1	P37275	1124 aa	Predicted RBP	12.04	□□□□□ -0.48
DDX42-215	ENST00000582985	PRPF38B	Q5VTL8	546 aa	Known RBP	12.04	□□□□□ -0.48
DDX42-215	ENST00000582985	OTOP1	Q7RTM1	612 aa		12.04	□□□□□ -0.48
DDX42-215	ENST00000582985	DZIP1L	Q8IYY4	767 aa	Known RBP	12.04	□□□□□ -0.48
DDX42-215	ENST00000582985	FAM9B	Q8IZU0	186 aa		12.04	□□□□□ -0.48
DDX42-215	ENST00000582985	TRIM17	Q9Y577	477 aa		12.04	□□□□□ -0.48
DDX42-215	ENST00000582985	UTY	O14607	1347 aa		12.04	□□□□□ -0.48
DDX42-215	ENST00000582985	MROH5	Q6ZUA9	1318 aa		12.04	□□□□□ -0.48
DDX42-215	ENST00000582985	ARAP2	Q8WZ64	1704 aa		12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	CRK	P46108	304 aa		12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	CRHR2	Q13324	411 aa		12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	OTUD7B	Q6GQQ9	843 aa		12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	FBXO33	Q7Z6M2	555 aa		12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	CDAN1	Q8IWY9	1227 aa		12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	OPTN	Q96CV9	577 aa		12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	TEPSIN	Q96N21	525 aa		12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	PTPN18	Q99952	460 aa		12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	BICC1	Q9H694	974 aa	Known RBP	12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	ELP3	Q9H9T3	547 aa		12.03	□□□□□ -0.48
DDX42-215	ENST00000582985	OTOF	Q9HC10	1997 aa		12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	TESPA1	A2RU30	521 aa	Predicted RBP	12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	TCP10L2	B9ZVM9	353 aa		12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	GRIK5	Q16478	980 aa		12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	RABL6	Q3YEC7	729 aa	Predicted RBP	12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	LRRC24	Q50LG9	513 aa		12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	VPS37D	Q86XT2	251 aa		12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	ANKRD44	Q8N8A2	993 aa		12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	ERO1A	Q96HE7	468 aa		12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	TMEM39B	Q9GZU3	492 aa		12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.02	□□□□□ -0.49
DDX42-215	ENST00000582985	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	TNNI2	P48788	182 aa		12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	CHAF1A	Q13111	956 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	CAVIN4	Q5BKX8	364 aa		12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	METTL24	Q5JXM2	366 aa		12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	MRPL50	Q8N5N7	158 aa	Known RBP	12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	VGLL2	Q8N8G2	317 aa		12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	CD99L2	Q8TCZ2	262 aa		12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	TBC1D22A	Q8WUA7	517 aa		12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	MS4A4A	Q96JQ5	239 aa		12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	ZNF521	Q96K83	1311 aa		12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	HTT	P42858	3142 aa		12.01	□□□□□ -0.49
DDX42-215	ENST00000582985	FRAT2	O75474	233 aa	Predicted RBP	12	□□□□□ -0.49
DDX42-215	ENST00000582985	PDE8B	O95263	885 aa		12	□□□□□ -0.49
DDX42-215	ENST00000582985	MAP3K9	P80192	1104 aa		12	□□□□□ -0.49
DDX42-215	ENST00000582985	HDLBP	Q00341	1268 aa	Known RBP	12	□□□□□ -0.49
DDX42-215	ENST00000582985	SP3	Q02447	781 aa		12	□□□□□ -0.49
DDX42-215	ENST00000582985	VGLL4	Q14135	290 aa		12	□□□□□ -0.49
DDX42-215	ENST00000582985	INTS3	Q68E01	1043 aa	Known RBP	12	□□□□□ -0.49
DDX42-215	ENST00000582985	LHX8	Q68G74	356 aa		12	□□□□□ -0.49
DDX42-215	ENST00000582985	PTPN22	Q9Y2R2	807 aa		12	□□□□□ -0.49
DDX42-215	ENST00000582985	BCAM	P50895	628 aa		11.99	□□□□□ -0.49
DDX42-215	ENST00000582985	CACNB3	P54284	484 aa		11.99	□□□□□ -0.49
DDX42-215	ENST00000582985	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
DDX42-215	ENST00000582985	KLHDC4	Q8TBB5	520 aa		11.99	□□□□□ -0.49
DDX42-215	ENST00000582985	BRI3BP	Q8WY22	251 aa		11.99	□□□□□ -0.49
DDX42-215	ENST00000582985	TEKT1	Q969V4	418 aa		11.99	□□□□□ -0.49
DDX42-215	ENST00000582985	EFCC1	Q9HA90	598 aa		11.99	□□□□□ -0.49
DDX42-215	ENST00000582985	PCDH10	Q9P2E7	1040 aa		11.99	□□□□□ -0.49
DDX42-215	ENST00000582985	CSAD	Q9Y600	493 aa		11.99	□□□□□ -0.49
DDX42-215	ENST00000582985	PTPRC	P08575	1304 aa		11.99	□□□□□ -0.49
DDX42-215	ENST00000582985	CCL15-CCL14	A0A0B4J2E2	113 aa		11.98	□□□□□ -0.49
DDX42-215	ENST00000582985	POTEF	A5A3E0	1075 aa		11.98	□□□□□ -0.49
DDX42-215	ENST00000582985	GTF2A2	P52657	109 aa		11.98	□□□□□ -0.49
DDX42-215	ENST00000582985	CAP1	Q01518	475 aa		11.98	□□□□□ -0.49
DDX42-215	ENST00000582985	CCL15	Q16663	113 aa		11.98	□□□□□ -0.49
DDX42-215	ENST00000582985	OTUD5	Q96G74	571 aa		11.98	□□□□□ -0.49
DDX42-215	ENST00000582985	ZDHHC15	Q96MV8	337 aa		11.98	□□□□□ -0.49
DDX42-215	ENST00000582985	MRI	Q9BWK5	157 aa		11.98	□□□□□ -0.49
DDX42-215	ENST00000582985	USP44	Q9H0E7	712 aa		11.98	□□□□□ -0.49
DDX42-215	ENST00000582985	KIF16B	Q96L93	1317 aa		11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	IFIT1	P09914	478 aa	Known RBP	11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	FGFR2	P21802	821 aa		11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	PUM3	Q15397	648 aa	Known RBP	11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	TAF1C	Q15572	869 aa	Predicted RBP	11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	FAM43A	Q8N2R8	423 aa		11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	SSH1	Q8WYL5	1049 aa		11.97	□□□□□ -0.49
DDX42-215	ENST00000582985	ARMC5	Q96C12	935 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms