RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 SRRDQ9UH36 339 aa11.26□□□□□ -0.61
CDK5RAP3-224ENST00000582275 STXBP5LQ9Y2K9 1186 aa11.26□□□□□ -0.61
CDK5RAP3-224ENST00000582275 SPDYE5A6NIY4 337 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 CCL5P13501 91 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 NEXNQ0ZGT2 675 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 SNAPC2Q13487 334 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 VGLL4Q14135 290 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 MTFR1Q15390 333 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 C15orf52Q6ZUT6 534 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 ZNF804AQ7Z570 1209 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 HOOK2Q96ED9 719 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 ARHGAP39Q9C0H5 1083 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 BIN2Q9UBW5 565 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 RIPOR2Q9Y4F9 1068 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 MYH3P11055 1940 aa11.25□□□□□ -0.61
CDK5RAP3-224ENST00000582275 F8W031 263 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-224ENST00000582275 PSMC4P43686 418 aa11.24□□□□□ -0.61
CDK5RAP3-224ENST00000582275 ERO1BQ86YB8 467 aa11.24□□□□□ -0.61
CDK5RAP3-224ENST00000582275 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-224ENST00000582275 CERS5Q8N5B7 392 aa11.24□□□□□ -0.61
CDK5RAP3-224ENST00000582275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDK5RAP3-224ENST00000582275 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-224ENST00000582275 PHAXQ9H814 394 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-224ENST00000582275 BTBD19C9JJ37 291 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 HAX1O00165 279 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 SOX1O00570 391 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 FMNL1O95466 1100 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 IL1R1P14778 569 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 KLRK1P26718 216 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 BMP8BP34820 402 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 NEUROD2Q15784 382 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 DEFB123Q8N688 67 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 SLAIN1Q8ND83 568 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 U2AF1L4Q8WU68 220 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 LRCH3Q96II8 777 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 ZNF70Q9UC06 446 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 SERPINA10Q9UK55 444 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 OTOFQ9HC10 1997 aa11.23□□□□□ -0.61
CDK5RAP3-224ENST00000582275 SGPL1O95470 568 aa11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 OSBPP22059 807 aa11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 ITGA6P23229 1130 aa11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 RANBP2P49792 3224 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 CHRNDQ07001 517 aa11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 PPIL2Q13356 520 aa11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 CCDC30Q5VVM6 783 aa11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 C17orf99Q6UX52 265 aa11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 MYPNQ86TC9 1320 aa11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 PCDHAC2Q9Y5I4 1007 aa11.22□□□□□ -0.61
CDK5RAP3-224ENST00000582275 SPEF2Q9C093 1822 aa11.21□□□□□ -0.61
CDK5RAP3-224ENST00000582275 A0A0C4DFX4 3053 aa11.21□□□□□ -0.61
CDK5RAP3-224ENST00000582275 FCGRTP55899 365 aa11.21□□□□□ -0.61
CDK5RAP3-224ENST00000582275 CALD1Q05682 793 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-224ENST00000582275 KSR2Q6VAB6 950 aa11.21□□□□□ -0.61
CDK5RAP3-224ENST00000582275 ANKRD23Q86SG2 305 aa11.21□□□□□ -0.61
CDK5RAP3-224ENST00000582275 TEPSINQ96N21 525 aa11.21□□□□□ -0.61
CDK5RAP3-224ENST00000582275 PLA2G12BQ9BX93 195 aa11.21□□□□□ -0.61
CDK5RAP3-224ENST00000582275 STAP2Q9UGK3 403 aa11.21□□□□□ -0.61
CDK5RAP3-224ENST00000582275 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
CDK5RAP3-224ENST00000582275 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
CDK5RAP3-224ENST00000582275 IRF6O14896 467 aa11.2□□□□□ -0.62
CDK5RAP3-224ENST00000582275 PPATQ06203 517 aa11.2□□□□□ -0.62
CDK5RAP3-224ENST00000582275 LRIT3Q3SXY7 679 aa11.2□□□□□ -0.62
CDK5RAP3-224ENST00000582275 RUNDC1Q96C34 613 aa11.2□□□□□ -0.62
CDK5RAP3-224ENST00000582275 TDRD3Q9H7E2 651 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-224ENST00000582275 MBIPQ9NS73 344 aa11.2□□□□□ -0.62
CDK5RAP3-224ENST00000582275 CPA4Q9UI42 421 aa11.2□□□□□ -0.62
CDK5RAP3-224ENST00000582275 FAM205AQ6ZU69 1335 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 ANKRD18BA2A2Z9 1011 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 TCP10L2B9ZVM9 353 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 H7C1W4 665 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 TFRCP02786 760 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 IGKV5-2P06315 115 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 DCAF15Q66K64 600 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 UBE3BQ7Z3V4 1068 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 DZIP1LQ8IYY4 767 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 WRNIP1Q96S55 665 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 PARK7Q99497 189 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 GDF15Q99988 308 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 COL25A1Q9BXS0 654 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 TMOD2Q9NZR1 351 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 TTF2Q9UNY4 1162 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 SNCAIPQ9Y6H5 919 aa11.19□□□□□ -0.62
CDK5RAP3-224ENST00000582275 COL6A3P12111 3177 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 ADGRA2Q96PE1 1338 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 IRS2Q9Y4H2 1338 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 PI4KAP2A4QPH2 592 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 NEURL1BA8MQ27 555 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 PDHXO00330 501 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 CSF1RP07333 972 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 GNAI1P63096 354 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 MFSD14BQ5SR56 506 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 NECAB2Q7Z6G3 386 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 PI4KAP1Q8N8J0 262 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 PXYLP1Q8TE99 480 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 TMEM39BQ9GZU3 492 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 UNC93B1Q9H1C4 597 aa11.18□□□□□ -0.62
CDK5RAP3-224ENST00000582275 MYH16Q9H6N6 1097 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms