RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 TNNT2P45379 298 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-221ENST00000581662 INHBEP58166 350 aa10.53□□□□□ -0.72
CDK5RAP3-221ENST00000581662 PTPN12Q05209 780 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-221ENST00000581662 SULT6B1Q6IMI4 303 aa10.53□□□□□ -0.72
CDK5RAP3-221ENST00000581662 SYMPKQ92797 1274 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-221ENST00000581662 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
CDK5RAP3-221ENST00000581662 ZNF646O15015 1829 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-221ENST00000581662 ZNF280AP59817 542 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-221ENST00000581662 MAP3K12Q12852 859 aa10.52□□□□□ -0.73
CDK5RAP3-221ENST00000581662 SCARF1Q14162 830 aa10.52□□□□□ -0.73
CDK5RAP3-221ENST00000581662 HLFQ16534 295 aa10.52□□□□□ -0.73
CDK5RAP3-221ENST00000581662 LDLRAD1Q5T700 205 aa10.52□□□□□ -0.73
CDK5RAP3-221ENST00000581662 FAM109BQ6ICB4 259 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-221ENST00000581662 SCUBE3Q8IX30 993 aa10.52□□□□□ -0.73
CDK5RAP3-221ENST00000581662 NYXQ9GZU5 481 aa10.52□□□□□ -0.73
CDK5RAP3-221ENST00000581662 ABCC4O15439 1325 aa10.52□□□□□ -0.73
CDK5RAP3-221ENST00000581662 TMEM265A0A087WTH1 108 aa10.51□□□□□ -0.73
CDK5RAP3-221ENST00000581662 GJA8P48165 433 aa10.51□□□□□ -0.73
CDK5RAP3-221ENST00000581662 TCIRG1Q13488 830 aa10.51□□□□□ -0.73
CDK5RAP3-221ENST00000581662 LAPTM4AQ15012 233 aa10.51□□□□□ -0.73
CDK5RAP3-221ENST00000581662 MTFR1Q15390 333 aa10.51□□□□□ -0.73
CDK5RAP3-221ENST00000581662 PRAMEF18Q5VWM3 479 aa10.51□□□□□ -0.73
CDK5RAP3-221ENST00000581662 RNF223E7ERA6 249 aa10.5□□□□□ -0.73
CDK5RAP3-221ENST00000581662 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
CDK5RAP3-221ENST00000581662 S1PR4O95977 384 aa10.5□□□□□ -0.73
CDK5RAP3-221ENST00000581662 MAP2K5Q13163 448 aa10.5□□□□□ -0.73
CDK5RAP3-221ENST00000581662 SP8Q8IXZ3 490 aa10.5□□□□□ -0.73
CDK5RAP3-221ENST00000581662 FMNL2Q96PY5 1086 aa10.5□□□□□ -0.73
CDK5RAP3-221ENST00000581662 TMX4Q9H1E5 349 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-221ENST00000581662 KCNQ5Q9NR82 932 aa10.5□□□□□ -0.73
CDK5RAP3-221ENST00000581662 SCAF8Q9UPN6 1271 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-221ENST00000581662 COL2A1P02458 1487 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-221ENST00000581662 FARP2O94887 1054 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-221ENST00000581662 ADH1BP00325 375 aa10.49□□□□□ -0.73
CDK5RAP3-221ENST00000581662 ZBTB48P10074 688 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-221ENST00000581662 TTLL12Q14166 644 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-221ENST00000581662 NBPF10Q6P3W6 841 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-221ENST00000581662 TDHQ8IZJ6 230 aa10.49□□□□□ -0.73
CDK5RAP3-221ENST00000581662 DBNDD1Q9H9R9 158 aa10.49□□□□□ -0.73
CDK5RAP3-221ENST00000581662 USP16Q9Y5T5 823 aa10.49□□□□□ -0.73
CDK5RAP3-221ENST00000581662 UBN2Q6ZU65 1347 aa10.49□□□□□ -0.73
CDK5RAP3-221ENST00000581662 GJB1P08034 283 aa10.48□□□□□ -0.73
CDK5RAP3-221ENST00000581662 VIL1P09327 827 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-221ENST00000581662 CDH23Q9H251 3354 aa10.48□□□□□ -0.73
CDK5RAP3-221ENST00000581662 IRS2Q9Y4H2 1338 aa10.48□□□□□ -0.73
CDK5RAP3-221ENST00000581662 LRRC37AA6NMS7 1700 aa10.47□□□□□ -0.73
CDK5RAP3-221ENST00000581662 IRF6O14896 467 aa10.47□□□□□ -0.73
CDK5RAP3-221ENST00000581662 NTSR2O95665 410 aa10.47□□□□□ -0.73
CDK5RAP3-221ENST00000581662 SLC19A1P41440 591 aa10.47□□□□□ -0.73
CDK5RAP3-221ENST00000581662 FUT2Q10981 343 aa10.47□□□□□ -0.73
CDK5RAP3-221ENST00000581662 ARHGEF6Q15052 776 aa10.47□□□□□ -0.73
CDK5RAP3-221ENST00000581662 MAFAQ8NHW3 353 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-221ENST00000581662 WNK4Q96J92 1243 aa10.47□□□□□ -0.73
CDK5RAP3-221ENST00000581662 PTPN18Q99952 460 aa10.47□□□□□ -0.73
CDK5RAP3-221ENST00000581662 SLC6A16Q9GZN6 736 aa10.47□□□□□ -0.73
CDK5RAP3-221ENST00000581662 ECE2O60344 883 aa10.46□□□□□ -0.73
CDK5RAP3-221ENST00000581662 BBOX1O75936 387 aa10.46□□□□□ -0.73
CDK5RAP3-221ENST00000581662 IL13P35225 146 aa10.46□□□□□ -0.73
CDK5RAP3-221ENST00000581662 GCGRP47871 477 aa10.46□□□□□ -0.73
CDK5RAP3-221ENST00000581662 MTHFSDQ2M296 383 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-221ENST00000581662 ARMC9Q7Z3E5 817 aa10.46□□□□□ -0.73
CDK5RAP3-221ENST00000581662 SPSB2Q99619 263 aa10.46□□□□□ -0.73
CDK5RAP3-221ENST00000581662 BDP1A6H8Y1 2624 aa10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 DLG5Q8TDM6 1919 aa10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 DDX60Q8IY21 1712 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 KCNQ3O43525 872 aa10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 NF2P35240 595 aa10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 WASHC4Q2M389 1173 aa10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 SUSD4Q5VX71 490 aa10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 ANKLE1Q8NAG6 615 aa10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 GMLQ99445 158 aa10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 ARHGAP39Q9C0H5 1083 aa10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 SCN9AQ15858 1988 aa10.45□□□□□ -0.74
CDK5RAP3-221ENST00000581662 GJA5P36382 358 aa10.44□□□□□ -0.74
CDK5RAP3-221ENST00000581662 MAGEA10P43363 369 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-221ENST00000581662 MDM2Q00987 491 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-221ENST00000581662 MAP3K11Q16584 847 aa10.44□□□□□ -0.74
CDK5RAP3-221ENST00000581662 MORN1Q5T089 497 aa10.44□□□□□ -0.74
CDK5RAP3-221ENST00000581662 OTUD7BQ6GQQ9 843 aa10.44□□□□□ -0.74
CDK5RAP3-221ENST00000581662 U2AF1L4Q8WU68 220 aaKnown RBP10.44□□□□□ -0.74
CDK5RAP3-221ENST00000581662 MYOZ2Q9NPC6 264 aa10.44□□□□□ -0.74
CDK5RAP3-221ENST00000581662 NCOR1O75376 2440 aa10.44□□□□□ -0.74
CDK5RAP3-221ENST00000581662 ERVV-1B6SEH8 477 aa10.43□□□□□ -0.74
CDK5RAP3-221ENST00000581662 CCL5P13501 91 aa10.43□□□□□ -0.74
CDK5RAP3-221ENST00000581662 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDK5RAP3-221ENST00000581662 KRI1Q8N9T8 703 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-221ENST00000581662 AGBL3Q8NEM8 1001 aa10.43□□□□□ -0.74
CDK5RAP3-221ENST00000581662 IL17REQ8NFR9 667 aa10.43□□□□□ -0.74
CDK5RAP3-221ENST00000581662 CLMNQ96JQ2 1002 aa10.43□□□□□ -0.74
CDK5RAP3-221ENST00000581662 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
CDK5RAP3-221ENST00000581662 ALPK3Q96L96 1907 aa10.43□□□□□ -0.74
CDK5RAP3-221ENST00000581662 ZSWIM8A7E2V4 1837 aa10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 NRG2O14511 850 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 GNRH1P01148 92 aa10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 PRMT2P55345 433 aa10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 PRKG1Q13976 671 aa10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 SLC10A5Q5PT55 438 aa10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 RSBN1LQ6PCB5 846 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 NLRP3Q96P20 1036 aa10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 CDX2Q99626 313 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms