RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 CAVIN4Q5BKX8 364 aa15.78■□□□□ 0.12
SMARCD2-207ENST00000578234 METTL24Q5JXM2 366 aa15.78■□□□□ 0.12
SMARCD2-207ENST00000578234 VPS37DQ86XT2 251 aa15.78■□□□□ 0.12
SMARCD2-207ENST00000578234 VGLL2Q8N8G2 317 aa15.78■□□□□ 0.12
SMARCD2-207ENST00000578234 USP44Q9H0E7 712 aa15.78■□□□□ 0.12
SMARCD2-207ENST00000578234 TRIM17Q9Y577 477 aa15.78■□□□□ 0.12
SMARCD2-207ENST00000578234 CRKP46108 304 aa15.77■□□□□ 0.12
SMARCD2-207ENST00000578234 HDLBPQ00341 1268 aaKnown RBP15.77■□□□□ 0.12
SMARCD2-207ENST00000578234 TBC1D22AQ8WUA7 517 aa15.77■□□□□ 0.12
SMARCD2-207ENST00000578234 SSH1Q8WYL5 1049 aa15.77■□□□□ 0.12
SMARCD2-207ENST00000578234 IGF2BP3O00425 579 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMARCD2-207ENST00000578234 TNNI2P48788 182 aa15.76■□□□□ 0.11
SMARCD2-207ENST00000578234 CHAF1AQ13111 956 aaPredicted RBP15.76■□□□□ 0.11
SMARCD2-207ENST00000578234 OTUD7BQ6GQQ9 843 aa15.76■□□□□ 0.11
SMARCD2-207ENST00000578234 TEPSINQ96N21 525 aa15.76■□□□□ 0.11
SMARCD2-207ENST00000578234 MRIQ9BWK5 157 aa15.76■□□□□ 0.11
SMARCD2-207ENST00000578234 IQSEC3Q9UPP2 1182 aaPredicted RBP15.76■□□□□ 0.11
SMARCD2-207ENST00000578234 ARAP2Q8WZ64 1704 aa15.76■□□□□ 0.11
SMARCD2-207ENST00000578234 TESPA1A2RU30 521 aaPredicted RBP15.75■□□□□ 0.11
SMARCD2-207ENST00000578234 TCP10L2B9ZVM9 353 aa15.75■□□□□ 0.11
SMARCD2-207ENST00000578234 GJA5P36382 358 aa15.75■□□□□ 0.11
SMARCD2-207ENST00000578234 SLFN5Q08AF3 891 aa15.75■□□□□ 0.11
SMARCD2-207ENST00000578234 GRIK5Q16478 980 aa15.75■□□□□ 0.11
SMARCD2-207ENST00000578234 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
SMARCD2-207ENST00000578234 ELP3Q9H9T3 547 aa15.75■□□□□ 0.11
SMARCD2-207ENST00000578234 KIF16BQ96L93 1317 aa15.74■□□□□ 0.11
SMARCD2-207ENST00000578234 BCAMP50895 628 aa15.74■□□□□ 0.11
SMARCD2-207ENST00000578234 KLHDC4Q8TBB5 520 aa15.74■□□□□ 0.11
SMARCD2-207ENST00000578234 TEKT1Q969V4 418 aa15.74■□□□□ 0.11
SMARCD2-207ENST00000578234 SUGT1Q9Y2Z0 365 aa15.74■□□□□ 0.11
SMARCD2-207ENST00000578234 IFIT1P09914 478 aaKnown RBP15.73■□□□□ 0.11
SMARCD2-207ENST00000578234 FGFR2P21802 821 aa15.73■□□□□ 0.11
SMARCD2-207ENST00000578234 PUM3Q15397 648 aaKnown RBP15.73■□□□□ 0.11
SMARCD2-207ENST00000578234 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.73■□□□□ 0.11
SMARCD2-207ENST00000578234 OPTNQ96CV9 577 aa15.73■□□□□ 0.11
SMARCD2-207ENST00000578234 ZDHHC15Q96MV8 337 aa15.73■□□□□ 0.11
SMARCD2-207ENST00000578234 PTPN18Q99952 460 aa15.73■□□□□ 0.11
SMARCD2-207ENST00000578234 TMEM39BQ9GZU3 492 aa15.73■□□□□ 0.11
SMARCD2-207ENST00000578234 AK9Q5TCS8 1911 aa15.72■□□□□ 0.11
SMARCD2-207ENST00000578234 EYA2O00167 538 aa15.72■□□□□ 0.11
SMARCD2-207ENST00000578234 MAP3K9P80192 1104 aa15.72■□□□□ 0.11
SMARCD2-207ENST00000578234 HNRNPUQ00839 825 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMARCD2-207ENST00000578234 CRHR2Q13324 411 aa15.72■□□□□ 0.11
SMARCD2-207ENST00000578234 OTOP1Q7RTM1 612 aa15.72■□□□□ 0.11
SMARCD2-207ENST00000578234 CDAN1Q8IWY9 1227 aa15.72■□□□□ 0.11
SMARCD2-207ENST00000578234 CD99L2Q8TCZ2 262 aa15.72■□□□□ 0.11
SMARCD2-207ENST00000578234 MS4A4AQ96JQ5 239 aa15.72■□□□□ 0.11
SMARCD2-207ENST00000578234 HTTP42858 3142 aa15.72■□□□□ 0.11
SMARCD2-207ENST00000578234 MAST3O60307 1309 aa15.71■□□□□ 0.11
SMARCD2-207ENST00000578234 OTOFQ9HC10 1997 aa15.71■□□□□ 0.11
SMARCD2-207ENST00000578234 ECM2O94769 699 aaPredicted RBP15.71■□□□□ 0.11
SMARCD2-207ENST00000578234 RFX5P48382 616 aaPredicted RBP15.71■□□□□ 0.11
SMARCD2-207ENST00000578234 VGLL4Q14135 290 aa15.71■□□□□ 0.11
SMARCD2-207ENST00000578234 PRPF38BQ5VTL8 546 aaKnown RBP15.71■□□□□ 0.11
SMARCD2-207ENST00000578234 FKBP1CQ5VVH2 108 aa15.71■□□□□ 0.11
SMARCD2-207ENST00000578234 FAM83AQ86UY5 434 aa15.71■□□□□ 0.11
SMARCD2-207ENST00000578234 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.71■□□□□ 0.11
SMARCD2-207ENST00000578234 ERO1AQ96HE7 468 aa15.71■□□□□ 0.11
SMARCD2-207ENST00000578234 MYCP01106 439 aaPredicted RBP15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 APOBEC3HQ6NTF7 200 aaKnown RBP15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 HHIPL2Q6UWX4 724 aa15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 TRMT2AQ8IZ69 625 aaKnown RBP15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 LPIN2Q92539 896 aa15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 HOOK2Q96ED9 719 aa15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 CDCA7LQ96GN5 454 aa15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 EFCC1Q9HA90 598 aa15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 SMC4Q9NTJ3 1288 aa15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 TMOD2Q9NZR1 351 aa15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 CSADQ9Y600 493 aa15.7■□□□□ 0.1
SMARCD2-207ENST00000578234 CT47B1P0C2W7 299 aaPredicted RBP15.69■□□□□ 0.1
SMARCD2-207ENST00000578234 SLC5A1P13866 664 aa15.69■□□□□ 0.1
SMARCD2-207ENST00000578234 GTF2A2P52657 109 aa15.69■□□□□ 0.1
SMARCD2-207ENST00000578234 CACNB3P54284 484 aa15.69■□□□□ 0.1
SMARCD2-207ENST00000578234 SP3Q02447 781 aa15.69■□□□□ 0.1
SMARCD2-207ENST00000578234 INTS3Q68E01 1043 aaKnown RBP15.69■□□□□ 0.1
SMARCD2-207ENST00000578234 ATG9AQ7Z3C6 839 aa15.69■□□□□ 0.1
SMARCD2-207ENST00000578234 WDR66Q8TBY9 1149 aa15.69■□□□□ 0.1
SMARCD2-207ENST00000578234 CENPFP49454 3210 aa15.68■□□□□ 0.1
SMARCD2-207ENST00000578234 SPDYE5A6NIY4 337 aa15.68■□□□□ 0.1
SMARCD2-207ENST00000578234 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
SMARCD2-207ENST00000578234 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
SMARCD2-207ENST00000578234 BRI3BPQ8WY22 251 aa15.68■□□□□ 0.1
SMARCD2-207ENST00000578234 OTUD5Q96G74 571 aa15.68■□□□□ 0.1
SMARCD2-207ENST00000578234 PTPN22Q9Y2R2 807 aa15.68■□□□□ 0.1
SMARCD2-207ENST00000578234 CCL15-CCL14A0A0B4J2E2 113 aa15.67■□□□□ 0.1
SMARCD2-207ENST00000578234 WDHD1O75717 1129 aaPredicted RBP15.67■□□□□ 0.1
SMARCD2-207ENST00000578234 CIAO1O76071 339 aa15.67■□□□□ 0.1
SMARCD2-207ENST00000578234 TAF1CQ15572 869 aaPredicted RBP15.67■□□□□ 0.1
SMARCD2-207ENST00000578234 CCL15Q16663 113 aa15.67■□□□□ 0.1
SMARCD2-207ENST00000578234 HDAC5Q9UQL6 1122 aa15.67■□□□□ 0.1
SMARCD2-207ENST00000578234 KIAA0100Q14667 2235 aaKnown RBP15.66■□□□□ 0.1
SMARCD2-207ENST00000578234 ERO1BQ86YB8 467 aa15.66■□□□□ 0.1
SMARCD2-207ENST00000578234 WRNIP1Q96S55 665 aa15.66■□□□□ 0.1
SMARCD2-207ENST00000578234 TMEM106CQ9BVX2 250 aa15.66■□□□□ 0.1
SMARCD2-207ENST00000578234 ZFYVE28Q9HCC9 887 aa15.66■□□□□ 0.1
SMARCD2-207ENST00000578234 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
SMARCD2-207ENST00000578234 NOB1Q9ULX3 412 aaKnown RBP15.66■□□□□ 0.1
SMARCD2-207ENST00000578234 SNCAIPQ9Y6H5 919 aa15.66■□□□□ 0.1
SMARCD2-207ENST00000578234 RPAP1Q9BWH6 1393 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms