RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 ANKRD13AQ8IZ07 590 aa16.59■□□□□ 0.25
ATP2A3-215ENST00000576957 CLMNQ96JQ2 1002 aa16.59■□□□□ 0.25
ATP2A3-215ENST00000576957 R3HDMLQ9H3Y0 253 aa16.59■□□□□ 0.25
ATP2A3-215ENST00000576957 PTPRCP08575 1304 aa16.59■□□□□ 0.25
ATP2A3-215ENST00000576957 OTUD7BQ6GQQ9 843 aa16.58■□□□□ 0.24
ATP2A3-215ENST00000576957 FBXO33Q7Z6M2 555 aa16.58■□□□□ 0.24
ATP2A3-215ENST00000576957 MRPL50Q8N5N7 158 aaKnown RBP16.58■□□□□ 0.24
ATP2A3-215ENST00000576957 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.24
ATP2A3-215ENST00000576957 ZNF70Q9UC06 446 aaPredicted RBP16.58■□□□□ 0.24
ATP2A3-215ENST00000576957 AOX1Q06278 1338 aa16.58■□□□□ 0.24
ATP2A3-215ENST00000576957 ARAP2Q8WZ64 1704 aa16.57■□□□□ 0.24
ATP2A3-215ENST00000576957 HDLBPQ00341 1268 aaKnown RBP16.57■□□□□ 0.24
ATP2A3-215ENST00000576957 CAVIN4Q5BKX8 364 aa16.57■□□□□ 0.24
ATP2A3-215ENST00000576957 VPS37DQ86XT2 251 aa16.57■□□□□ 0.24
ATP2A3-215ENST00000576957 DZIP1LQ8IYY4 767 aaKnown RBP16.57■□□□□ 0.24
ATP2A3-215ENST00000576957 TBC1D22AQ8WUA7 517 aa16.57■□□□□ 0.24
ATP2A3-215ENST00000576957 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
ATP2A3-215ENST00000576957 TESPA1A2RU30 521 aaPredicted RBP16.56■□□□□ 0.24
ATP2A3-215ENST00000576957 IGF2BP3O00425 579 aaKnown RBP eCLIP16.56■□□□□ 0.24
ATP2A3-215ENST00000576957 PDE8BO95263 885 aa16.56■□□□□ 0.24
ATP2A3-215ENST00000576957 CRKP46108 304 aa16.56■□□□□ 0.24
ATP2A3-215ENST00000576957 TNNI2P48788 182 aa16.56■□□□□ 0.24
ATP2A3-215ENST00000576957 METTL24Q5JXM2 366 aa16.56■□□□□ 0.24
ATP2A3-215ENST00000576957 RCAN3Q9UKA8 241 aa16.56■□□□□ 0.24
ATP2A3-215ENST00000576957 NOP58Q9Y2X3 529 aaKnown RBP16.56■□□□□ 0.24
ATP2A3-215ENST00000576957 E9PSI1 815 aa16.55■□□□□ 0.24
ATP2A3-215ENST00000576957 LRRC24Q50LG9 513 aa16.55■□□□□ 0.24
ATP2A3-215ENST00000576957 ANKRD44Q8N8A2 993 aa16.55■□□□□ 0.24
ATP2A3-215ENST00000576957 VGLL2Q8N8G2 317 aa16.55■□□□□ 0.24
ATP2A3-215ENST00000576957 TEPSINQ96N21 525 aa16.55■□□□□ 0.24
ATP2A3-215ENST00000576957 MRIQ9BWK5 157 aa16.55■□□□□ 0.24
ATP2A3-215ENST00000576957 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.55■□□□□ 0.24
ATP2A3-215ENST00000576957 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
ATP2A3-215ENST00000576957 FRAT2O75474 233 aaPredicted RBP16.54■□□□□ 0.24
ATP2A3-215ENST00000576957 GJA5P36382 358 aa16.54■□□□□ 0.24
ATP2A3-215ENST00000576957 SUGT1Q9Y2Z0 365 aa16.54■□□□□ 0.24
ATP2A3-215ENST00000576957 MS4A1P11836 297 aa16.53■□□□□ 0.24
ATP2A3-215ENST00000576957 TEKT1Q969V4 418 aa16.53■□□□□ 0.24
ATP2A3-215ENST00000576957 OPTNQ96CV9 577 aa16.53■□□□□ 0.24
ATP2A3-215ENST00000576957 ERO1AQ96HE7 468 aa16.53■□□□□ 0.24
ATP2A3-215ENST00000576957 USP44Q9H0E7 712 aa16.53■□□□□ 0.24
ATP2A3-215ENST00000576957 TRIM17Q9Y577 477 aa16.53■□□□□ 0.24
ATP2A3-215ENST00000576957 TCP10L2B9ZVM9 353 aa16.52■□□□□ 0.24
ATP2A3-215ENST00000576957 MAP3K9P80192 1104 aa16.52■□□□□ 0.24
ATP2A3-215ENST00000576957 CHAF1AQ13111 956 aaPredicted RBP16.52■□□□□ 0.24
ATP2A3-215ENST00000576957 INTS3Q68E01 1043 aaKnown RBP16.52■□□□□ 0.24
ATP2A3-215ENST00000576957 OTOP1Q7RTM1 612 aa16.52■□□□□ 0.24
ATP2A3-215ENST00000576957 SSH1Q8WYL5 1049 aa16.52■□□□□ 0.24
ATP2A3-215ENST00000576957 TMEM39BQ9GZU3 492 aa16.52■□□□□ 0.24
ATP2A3-215ENST00000576957 ELP3Q9H9T3 547 aa16.52■□□□□ 0.24
ATP2A3-215ENST00000576957 IQSEC3Q9UPP2 1182 aaPredicted RBP16.52■□□□□ 0.24
ATP2A3-215ENST00000576957 PDE4DIPQ5VU43 2346 aa16.52■□□□□ 0.23
ATP2A3-215ENST00000576957 MAST3O60307 1309 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 IFIT1P09914 478 aaKnown RBP16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 BCAMP50895 628 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 CRHR2Q13324 411 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 PUM3Q15397 648 aaKnown RBP16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 GRIK5Q16478 980 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 ALDH1L2Q3SY69 923 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 PRPF38BQ5VTL8 546 aaKnown RBP16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 FKBP1CQ5VVH2 108 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 MS4A4AQ96JQ5 239 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 ZDHHC15Q96MV8 337 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 PTPN18Q99952 460 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 CSADQ9Y600 493 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 OTOFQ9HC10 1997 aa16.51■□□□□ 0.23
ATP2A3-215ENST00000576957 FGFR2P21802 821 aa16.5■□□□□ 0.23
ATP2A3-215ENST00000576957 GTF2A2P52657 109 aa16.5■□□□□ 0.23
ATP2A3-215ENST00000576957 SP3Q02447 781 aa16.5■□□□□ 0.23
ATP2A3-215ENST00000576957 SLFN5Q08AF3 891 aa16.5■□□□□ 0.23
ATP2A3-215ENST00000576957 FAM83AQ86UY5 434 aa16.5■□□□□ 0.23
ATP2A3-215ENST00000576957 KLHDC4Q8TBB5 520 aa16.5■□□□□ 0.23
ATP2A3-215ENST00000576957 HOOK2Q96ED9 719 aa16.5■□□□□ 0.23
ATP2A3-215ENST00000576957 IPO9Q96P70 1041 aaKnown RBP16.5■□□□□ 0.23
ATP2A3-215ENST00000576957 TMOD2Q9NZR1 351 aa16.5■□□□□ 0.23
ATP2A3-215ENST00000576957 EYA2O00167 538 aa16.49■□□□□ 0.23
ATP2A3-215ENST00000576957 VGLL4Q14135 290 aa16.49■□□□□ 0.23
ATP2A3-215ENST00000576957 HHIPL2Q6UWX4 724 aa16.49■□□□□ 0.23
ATP2A3-215ENST00000576957 CDAN1Q8IWY9 1227 aa16.49■□□□□ 0.23
ATP2A3-215ENST00000576957 PTPN22Q9Y2R2 807 aa16.49■□□□□ 0.23
ATP2A3-215ENST00000576957 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
ATP2A3-215ENST00000576957 ARHGEF6Q15052 776 aa16.48■□□□□ 0.23
ATP2A3-215ENST00000576957 APOBEC3HQ6NTF7 200 aaKnown RBP16.48■□□□□ 0.23
ATP2A3-215ENST00000576957 WDR66Q8TBY9 1149 aa16.48■□□□□ 0.23
ATP2A3-215ENST00000576957 CD99L2Q8TCZ2 262 aa16.48■□□□□ 0.23
ATP2A3-215ENST00000576957 LPIN2Q92539 896 aa16.48■□□□□ 0.23
ATP2A3-215ENST00000576957 EFCC1Q9HA90 598 aa16.48■□□□□ 0.23
ATP2A3-215ENST00000576957 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
ATP2A3-215ENST00000576957 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
ATP2A3-215ENST00000576957 SPDYE5A6NIY4 337 aa16.47■□□□□ 0.23
ATP2A3-215ENST00000576957 SLC5A1P13866 664 aa16.47■□□□□ 0.23
ATP2A3-215ENST00000576957 CCL15Q16663 113 aa16.47■□□□□ 0.23
ATP2A3-215ENST00000576957 BRI3BPQ8WY22 251 aa16.47■□□□□ 0.23
ATP2A3-215ENST00000576957 ZFYVE28Q9HCC9 887 aa16.47■□□□□ 0.23
ATP2A3-215ENST00000576957 WDHD1O75717 1129 aaPredicted RBP16.46■□□□□ 0.23
ATP2A3-215ENST00000576957 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.23
ATP2A3-215ENST00000576957 CACNB3P54284 484 aa16.46■□□□□ 0.23
ATP2A3-215ENST00000576957 DCAF15Q66K64 600 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms