RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 DPF3Q92784 378 aa15.55■□□□□ 0.08
PRPF8-208ENST00000573716 ARHGAP39Q9C0H5 1083 aa15.55■□□□□ 0.08
PRPF8-208ENST00000573716 TTF2Q9UNY4 1162 aaKnown RBP15.55■□□□□ 0.08
PRPF8-208ENST00000573716 CASP7P55210 303 aa15.54■□□□□ 0.08
PRPF8-208ENST00000573716 FKBP1AP62942 108 aaKnown RBP15.54■□□□□ 0.08
PRPF8-208ENST00000573716 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
PRPF8-208ENST00000573716 FKBP5Q13451 457 aaPredicted RBP15.54■□□□□ 0.08
PRPF8-208ENST00000573716 SPDYE2Q495Y8 402 aa15.54■□□□□ 0.08
PRPF8-208ENST00000573716 TAF7LQ5H9L4 462 aa15.54■□□□□ 0.08
PRPF8-208ENST00000573716 MFSD14BQ5SR56 506 aa15.54■□□□□ 0.08
PRPF8-208ENST00000573716 C15orf52Q6ZUT6 534 aaKnown RBP15.54■□□□□ 0.08
PRPF8-208ENST00000573716 TMEM39BQ9GZU3 492 aa15.54■□□□□ 0.08
PRPF8-208ENST00000573716 BRCA2P51587 3418 aa15.53■□□□□ 0.08
PRPF8-208ENST00000573716 TWISTNBQ3B726 338 aaPredicted RBP15.53■□□□□ 0.08
PRPF8-208ENST00000573716 CNNM1Q9NRU3 951 aa15.53■□□□□ 0.08
PRPF8-208ENST00000573716 ARAP2Q8WZ64 1704 aa15.53■□□□□ 0.08
PRPF8-208ENST00000573716 TNNI2P48788 182 aa15.52■□□□□ 0.08
PRPF8-208ENST00000573716 FLIIQ13045 1269 aa15.52■□□□□ 0.08
PRPF8-208ENST00000573716 DZIP1LQ8IYY4 767 aaKnown RBP15.52■□□□□ 0.08
PRPF8-208ENST00000573716 DNAAF4Q8WXU2 420 aa15.52■□□□□ 0.08
PRPF8-208ENST00000573716 ZNF594Q96JF6 807 aaPredicted RBP15.52■□□□□ 0.08
PRPF8-208ENST00000573716 TEPSINQ96N21 525 aa15.52■□□□□ 0.08
PRPF8-208ENST00000573716 CETPP11597 493 aa15.51■□□□□ 0.07
PRPF8-208ENST00000573716 LACTBP83111 547 aaPredicted RBP15.51■□□□□ 0.07
PRPF8-208ENST00000573716 LDHAL6AQ6ZMR3 332 aa15.51■□□□□ 0.07
PRPF8-208ENST00000573716 LINS1Q8NG48 757 aa15.51■□□□□ 0.07
PRPF8-208ENST00000573716 RBM27Q9P2N5 1060 aaKnown RBP15.51■□□□□ 0.07
PRPF8-208ENST00000573716 SERPINA10Q9UK55 444 aa15.51■□□□□ 0.07
PRPF8-208ENST00000573716 TLR2O60603 784 aa15.5■□□□□ 0.07
PRPF8-208ENST00000573716 CRKP46108 304 aa15.5■□□□□ 0.07
PRPF8-208ENST00000573716 GYG1P46976 350 aa15.5■□□□□ 0.07
PRPF8-208ENST00000573716 CACNB3P54284 484 aa15.5■□□□□ 0.07
PRPF8-208ENST00000573716 FOXO4P98177 505 aa15.5■□□□□ 0.07
PRPF8-208ENST00000573716 MTFR1Q15390 333 aa15.5■□□□□ 0.07
PRPF8-208ENST00000573716 LMBR1LQ6UX01 489 aa15.5■□□□□ 0.07
PRPF8-208ENST00000573716 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.5■□□□□ 0.07
PRPF8-208ENST00000573716 FAM205AQ6ZU69 1335 aa15.49■□□□□ 0.07
PRPF8-208ENST00000573716 SPDYE5A6NIY4 337 aa15.49■□□□□ 0.07
PRPF8-208ENST00000573716 BTBD19C9JJ37 291 aa15.49■□□□□ 0.07
PRPF8-208ENST00000573716 CCDC57Q2TAC2 916 aa15.49■□□□□ 0.07
PRPF8-208ENST00000573716 WRNIP1Q96S55 665 aa15.49■□□□□ 0.07
PRPF8-208ENST00000573716 BIN2Q9UBW5 565 aaPredicted RBP15.49■□□□□ 0.07
PRPF8-208ENST00000573716 HIBADHP31937 336 aaKnown RBP15.48■□□□□ 0.07
PRPF8-208ENST00000573716 CHAF1AQ13111 956 aaPredicted RBP15.48■□□□□ 0.07
PRPF8-208ENST00000573716 SNAPC2Q13487 334 aa15.48■□□□□ 0.07
PRPF8-208ENST00000573716 ERO1BQ86YB8 467 aa15.48■□□□□ 0.07
PRPF8-208ENST00000573716 SLC17A8Q8NDX2 589 aa15.48■□□□□ 0.07
PRPF8-208ENST00000573716 RAET1EQ8TD07 263 aa15.48■□□□□ 0.07
PRPF8-208ENST00000573716 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
PRPF8-208ENST00000573716 SHISA4Q96DD7 197 aa15.48■□□□□ 0.07
PRPF8-208ENST00000573716 CPA4Q9UI42 421 aa15.48■□□□□ 0.07
PRPF8-208ENST00000573716 IQSEC3Q9UPP2 1182 aaPredicted RBP15.48■□□□□ 0.07
PRPF8-208ENST00000573716 SNCAIPQ9Y6H5 919 aa15.48■□□□□ 0.07
PRPF8-208ENST00000573716 DLL1O00548 723 aa15.47■□□□□ 0.07
PRPF8-208ENST00000573716 FMNL1O95466 1100 aaPredicted RBP15.47■□□□□ 0.07
PRPF8-208ENST00000573716 GNRH1P01148 92 aa15.47■□□□□ 0.07
PRPF8-208ENST00000573716 PSMC4P43686 418 aa15.47■□□□□ 0.07
PRPF8-208ENST00000573716 PRMT2P55345 433 aa15.47■□□□□ 0.07
PRPF8-208ENST00000573716 TDRD7Q8NHU6 1098 aaKnown RBP15.47■□□□□ 0.07
PRPF8-208ENST00000573716 F6X3S4 739 aa15.46■□□□□ 0.07
PRPF8-208ENST00000573716 IRF6O14896 467 aa15.46■□□□□ 0.07
PRPF8-208ENST00000573716 FRAT2O75474 233 aaPredicted RBP15.46■□□□□ 0.07
PRPF8-208ENST00000573716 GRIK5Q16478 980 aa15.46■□□□□ 0.07
PRPF8-208ENST00000573716 EPHA10Q5JZY3 1008 aa15.46■□□□□ 0.07
PRPF8-208ENST00000573716 VPS37DQ86XT2 251 aa15.46■□□□□ 0.07
PRPF8-208ENST00000573716 TRIM47Q96LD4 638 aa15.46■□□□□ 0.07
PRPF8-208ENST00000573716 HTATIP2Q9BUP3 242 aa15.46■□□□□ 0.07
PRPF8-208ENST00000573716 TMOD2Q9NZR1 351 aa15.46■□□□□ 0.07
PRPF8-208ENST00000573716 CCL5P13501 91 aa15.45■□□□□ 0.06
PRPF8-208ENST00000573716 GRK4P32298 578 aa15.45■□□□□ 0.06
PRPF8-208ENST00000573716 PPIL2Q13356 520 aa15.45■□□□□ 0.06
PRPF8-208ENST00000573716 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.45■□□□□ 0.06
PRPF8-208ENST00000573716 NKX2-3Q8TAU0 364 aa15.45■□□□□ 0.06
PRPF8-208ENST00000573716 FAM84BQ96KN1 310 aaPredicted RBP15.45■□□□□ 0.06
PRPF8-208ENST00000573716 RNF208Q9H0X6 261 aa15.45■□□□□ 0.06
PRPF8-208ENST00000573716 ZCCHC17Q9NP64 241 aaKnown RBP15.45■□□□□ 0.06
PRPF8-208ENST00000573716 SRRDQ9UH36 339 aa15.45■□□□□ 0.06
PRPF8-208ENST00000573716 CACNA1FO60840 1977 aa15.45■□□□□ 0.06
PRPF8-208ENST00000573716 OSBPP22059 807 aa15.44■□□□□ 0.06
PRPF8-208ENST00000573716 HOXD10P28358 340 aa15.44■□□□□ 0.06
PRPF8-208ENST00000573716 CTGFP29279 349 aa15.44■□□□□ 0.06
PRPF8-208ENST00000573716 UBE4AQ14139 1066 aa15.44■□□□□ 0.06
PRPF8-208ENST00000573716 TEKT1Q969V4 418 aa15.44■□□□□ 0.06
PRPF8-208ENST00000573716 RIPOR2Q9Y4F9 1068 aa15.44■□□□□ 0.06
PRPF8-208ENST00000573716 NR2E3Q9Y5X4 410 aa15.44■□□□□ 0.06
PRPF8-208ENST00000573716 AK9Q5TCS8 1911 aa15.44■□□□□ 0.06
PRPF8-208ENST00000573716 MYPNQ86TC9 1320 aa15.43■□□□□ 0.06
PRPF8-208ENST00000573716 SZT2Q5T011 3432 aa15.43■□□□□ 0.06
PRPF8-208ENST00000573716 DCAF15Q66K64 600 aa15.43■□□□□ 0.06
PRPF8-208ENST00000573716 C17orf99Q6UX52 265 aa15.43■□□□□ 0.06
PRPF8-208ENST00000573716 MIGA2Q7L4E1 593 aa15.43■□□□□ 0.06
PRPF8-208ENST00000573716 HOOK2Q96ED9 719 aa15.43■□□□□ 0.06
PRPF8-208ENST00000573716 PUS3Q9BZE2 481 aaKnown RBP15.43■□□□□ 0.06
PRPF8-208ENST00000573716 PRKRIP1Q9H875 184 aaPredicted RBP15.43■□□□□ 0.06
PRPF8-208ENST00000573716 C9orf78Q9NZ63 289 aaPredicted RBP15.43■□□□□ 0.06
PRPF8-208ENST00000573716 PDHXO00330 501 aa15.42■□□□□ 0.06
PRPF8-208ENST00000573716 FARP2O94887 1054 aaPredicted RBP15.42■□□□□ 0.06
PRPF8-208ENST00000573716 GJB1P08034 283 aa15.42■□□□□ 0.06
PRPF8-208ENST00000573716 GJA8P48165 433 aa15.42■□□□□ 0.06
PRPF8-208ENST00000573716 UBXN2AP68543 259 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms