RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 PSMD14O00487 310 aa10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 BBOX1O75936 387 aa10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 CSF1RP07333 972 aa10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 RPS12P25398 132 aaKnown RBP10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 OS9Q13438 667 aaPredicted RBP10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 CCDC57Q2TAC2 916 aa10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 KIF4BQ2VIQ3 1234 aa10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 SP8Q8IXZ3 490 aa10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 CDCA5Q96FF9 252 aa10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 LRRCC1Q9C099 1032 aa10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 COPRSQ9NQ92 184 aa10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
KLHDC4-220ENST00000568338 RTL9Q8NET4 1388 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 APBB1O00213 710 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 FKTNO75072 461 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 EGFRP00533 1210 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 HCLS1P14317 486 aaPredicted RBP10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 FKBP1BP68106 108 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 G3BP1Q13283 466 aaKnown RBP eCLIP10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 IFIT5Q13325 482 aaKnown RBP10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 NOM1Q5C9Z4 860 aaKnown RBP10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 TTLL11Q8NHH1 800 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 KIF1BPQ96EK5 621 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 MFRPQ9BY79 579 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 LNPKQ9C0E8 428 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 PA2G4Q9UQ80 394 aaKnown RBP10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 AKAP11Q9UKA4 1901 aa10.56□□□□□ -0.72
KLHDC4-220ENST00000568338 ANKRD18BA2A2Z9 1011 aa10.55□□□□□ -0.72
KLHDC4-220ENST00000568338 DLL1O00548 723 aa10.55□□□□□ -0.72
KLHDC4-220ENST00000568338 ITGA6P23229 1130 aa10.55□□□□□ -0.72
KLHDC4-220ENST00000568338 RGS3P49796 1198 aa10.55□□□□□ -0.72
KLHDC4-220ENST00000568338 PTPN12Q05209 780 aaKnown RBP10.55□□□□□ -0.72
KLHDC4-220ENST00000568338 CCDC152Q4G0S7 254 aa10.55□□□□□ -0.72
KLHDC4-220ENST00000568338 TAF7LQ5H9L4 462 aa10.55□□□□□ -0.72
KLHDC4-220ENST00000568338 SLC10A5Q5PT55 438 aa10.55□□□□□ -0.72
KLHDC4-220ENST00000568338 RHPN1Q8TCX5 695 aa10.55□□□□□ -0.72
KLHDC4-220ENST00000568338 SIL1Q9H173 461 aa10.55□□□□□ -0.72
KLHDC4-220ENST00000568338 SPEF2Q9C093 1822 aa10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 CIAO1O76071 339 aa10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 SREBF2Q12772 1141 aa10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 DDX46Q7L014 1031 aaKnown RBP10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 HS6ST3Q8IZP7 471 aa10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 KLHDC4Q8TBB5 520 aa10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 CCDC85AQ96PX6 553 aaPredicted RBP10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 TMEM121BQ9BXQ6 578 aaPredicted RBP10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 GREM2Q9H772 168 aa10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 DBNDD1Q9H9R9 158 aa10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 PAPPA2Q9BXP8 1791 aa10.54□□□□□ -0.72
KLHDC4-220ENST00000568338 SMARCA5O60264 1052 aaPredicted RBP10.53□□□□□ -0.72
KLHDC4-220ENST00000568338 PDE4AP27815 886 aa10.53□□□□□ -0.72
KLHDC4-220ENST00000568338 GRAPQ13588 217 aa10.53□□□□□ -0.72
KLHDC4-220ENST00000568338 SF3B3Q15393 1217 aaKnown RBP10.53□□□□□ -0.72
KLHDC4-220ENST00000568338 ANGEL2Q5VTE6 544 aaKnown RBP10.53□□□□□ -0.72
KLHDC4-220ENST00000568338 TMC4Q7Z404 712 aa10.53□□□□□ -0.72
KLHDC4-220ENST00000568338 SKAP1Q86WV1 359 aa10.53□□□□□ -0.72
KLHDC4-220ENST00000568338 GRAPLQ8TC17 118 aaPredicted RBP10.53□□□□□ -0.72
KLHDC4-220ENST00000568338 DUOX1Q9NRD9 1551 aa10.52□□□□□ -0.72
KLHDC4-220ENST00000568338 G3V3G9 751 aa10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 EYA2O00167 538 aa10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 RIMBP2O15034 1052 aa10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 ECE2O60344 883 aa10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 IL15P40933 162 aaPredicted RBP10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 TM4SF4P48230 202 aa10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 TTLL12Q14166 644 aaPredicted RBP10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 LCE2DQ5TA82 110 aaPredicted RBP10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 CLASRPQ8N2M8 674 aaKnown RBP10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 CDC5LQ99459 802 aaKnown RBP10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 IL1RAPL2Q9NP60 686 aa10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 TRIM17Q9Y577 477 aa10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 ASTN2O75129 1339 aaPredicted RBP10.52□□□□□ -0.73
KLHDC4-220ENST00000568338 UBE2Q2LH0YL09 131 aa10.51□□□□□ -0.73
KLHDC4-220ENST00000568338 C6orf229H3BNL8 230 aa10.51□□□□□ -0.73
KLHDC4-220ENST00000568338 SASH1O94885 1247 aa10.51□□□□□ -0.73
KLHDC4-220ENST00000568338 IGHMBP2P38935 993 aaKnown RBP10.51□□□□□ -0.73
KLHDC4-220ENST00000568338 SLC17A8Q8NDX2 589 aa10.51□□□□□ -0.73
KLHDC4-220ENST00000568338 ZNF594Q96JF6 807 aaPredicted RBP10.51□□□□□ -0.73
KLHDC4-220ENST00000568338 EYA3Q99504 573 aa10.51□□□□□ -0.73
KLHDC4-220ENST00000568338 BCL11AQ9H165 835 aa10.51□□□□□ -0.73
KLHDC4-220ENST00000568338 NSFL1CQ9UNZ2 370 aaKnown RBP10.51□□□□□ -0.73
KLHDC4-220ENST00000568338 A0A1B0GUL6 1792 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 MX1P20591 662 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 SCARF1Q14162 830 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 DOK7Q18PE1 504 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 LDHAL6AQ6ZMR3 332 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 MOB2Q70IA6 237 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 ATG9AQ7Z3C6 839 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 PLEKHM2Q8IWE5 1019 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 GPATCH3Q96I76 525 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 MPHOSPH8Q99549 860 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 CFHR5Q9BXR6 569 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 GPR108Q9NPR9 543 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 CNNM1Q9NRU3 951 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 AOX1Q06278 1338 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 ZNF609O15014 1411 aa10.5□□□□□ -0.73
KLHDC4-220ENST00000568338 IFIT2P09913 472 aaKnown RBP10.49□□□□□ -0.73
KLHDC4-220ENST00000568338 EN2P19622 333 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms