RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 BRAPQ7Z569 592 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 PIGBQ92521 554 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 SMARCE1Q969G3 411 aa13.35□□□□□ -0.27
CDH1-210ENST00000566612 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDH1-210ENST00000566612 V9GYY5 206 aaPredicted RBP13.35□□□□□ -0.27
CDH1-210ENST00000566612 URI1O94763 535 aaPredicted RBP13.34□□□□□ -0.27
CDH1-210ENST00000566612 SPATA5Q8NB90 893 aa13.34□□□□□ -0.27
CDH1-210ENST00000566612 CDK5RAP3Q96JB5 506 aa13.34□□□□□ -0.27
CDH1-210ENST00000566612 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
CDH1-210ENST00000566612 CEMIPQ8WUJ3 1361 aa13.34□□□□□ -0.27
CDH1-210ENST00000566612 CEP135Q66GS9 1140 aa13.34□□□□□ -0.27
CDH1-210ENST00000566612 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
CDH1-210ENST00000566612 CCP110O43303 1012 aa13.34□□□□□ -0.27
CDH1-210ENST00000566612 GIGYF2Q6Y7W6 1299 aaKnown RBP13.34□□□□□ -0.27
CDH1-210ENST00000566612 PUS7LQ9H0K6 701 aaKnown RBP13.34□□□□□ -0.27
CDH1-210ENST00000566612 SPDYE4A6NLX3 237 aa13.33□□□□□ -0.27
CDH1-210ENST00000566612 BCAMP50895 628 aa13.33□□□□□ -0.27
CDH1-210ENST00000566612 NSUN7Q8NE18 718 aaKnown RBP13.33□□□□□ -0.27
CDH1-210ENST00000566612 MAGEC2Q9UBF1 373 aaPredicted RBP13.33□□□□□ -0.27
CDH1-210ENST00000566612 RICTORQ6R327 1708 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 SSBP05455 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDH1-210ENST00000566612 PDE6AP16499 860 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 NAP1L1P55209 391 aaKnown RBP13.33□□□□□ -0.28
CDH1-210ENST00000566612 GSDMDP57764 484 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 LRMPQ12912 555 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 PDIA6Q15084 440 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 KRT40Q6A162 431 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 TMTC2Q8N394 836 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 ZNF274Q96GC6 653 aaPredicted RBP13.33□□□□□ -0.28
CDH1-210ENST00000566612 KCNJ14Q9UNX9 436 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 HLFQ16534 295 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 MAP3K15Q6ZN16 1313 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 KIF20BQ96Q89 1820 aa13.33□□□□□ -0.28
CDH1-210ENST00000566612 A0A0U1RQG5 324 aaPredicted RBP13.32□□□□□ -0.28
CDH1-210ENST00000566612 C6orf229H3BNL8 230 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 NEMFO60524 1076 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 ZNF75DP51815 510 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 KCNQ4P56696 695 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 DHX58Q96C10 678 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 KAZALD1Q96I82 304 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 CABP5Q9NP86 173 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 ZNF202O95125 648 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 RBM5P52756 815 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDH1-210ENST00000566612 CRNKL1Q9BZJ0 848 aaKnown RBP13.32□□□□□ -0.28
CDH1-210ENST00000566612 GJB4Q9NTQ9 266 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 CCDC87Q9NVE4 849 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 CCDC194A0A1B0GVG4 234 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 PDE8BO95263 885 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 RFC4P35249 363 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 PDE4BQ07343 736 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 SNW1Q13573 536 aaKnown RBP13.32□□□□□ -0.28
CDH1-210ENST00000566612 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 ZHX3Q9H4I2 956 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 ZNF335Q9H4Z2 1342 aaPredicted RBP13.32□□□□□ -0.28
CDH1-210ENST00000566612 MYSM1Q5VVJ2 828 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 KAT14Q9H8E8 782 aa13.32□□□□□ -0.28
CDH1-210ENST00000566612 STX17P56962 302 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 ZSCAN29Q8IWY8 852 aaPredicted RBP13.31□□□□□ -0.28
CDH1-210ENST00000566612 SEC31BQ9NQW1 1179 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 SALL3Q9BXA9 1300 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 ATL3Q6DD88 541 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 DIS3L2Q8IYB7 885 aaKnown RBP13.31□□□□□ -0.28
CDH1-210ENST00000566612 UBXN4Q92575 508 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 TMEM87BQ96K49 555 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 PDE4CQ08493 712 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 STIM1Q13586 685 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 NLRP10Q86W26 655 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 RPGRQ92834 1020 aaKnown RBP13.31□□□□□ -0.28
CDH1-210ENST00000566612 GPR108Q9NPR9 543 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 MCM9Q9NXL9 1143 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 PCDHA7Q9UN72 937 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 IFT172Q9UG01 1749 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 NCOA3Q9Y6Q9 1424 aa13.31□□□□□ -0.28
CDH1-210ENST00000566612 TRIM75PA6NK02 468 aa13.3□□□□□ -0.28
CDH1-210ENST00000566612 GNAT2P19087 354 aa13.3□□□□□ -0.28
CDH1-210ENST00000566612 NRBP1Q9UHY1 535 aa13.3□□□□□ -0.28
CDH1-210ENST00000566612 CLIC4Q9Y696 253 aa13.3□□□□□ -0.28
CDH1-210ENST00000566612 MRVI1Q9Y6F6 885 aa13.3□□□□□ -0.28
CDH1-210ENST00000566612 GYG1P46976 350 aa13.3□□□□□ -0.28
CDH1-210ENST00000566612 SDR42E1Q8WUS8 393 aa13.3□□□□□ -0.28
CDH1-210ENST00000566612 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
CDH1-210ENST00000566612 MPHOSPH10O00566 681 aaKnown RBP13.3□□□□□ -0.28
CDH1-210ENST00000566612 ZNF500O60304 480 aaPredicted RBP13.3□□□□□ -0.28
CDH1-210ENST00000566612 CIAO1O76071 339 aa13.3□□□□□ -0.28
CDH1-210ENST00000566612 GOLGA6L1Q8N7Z2 621 aa13.3□□□□□ -0.28
CDH1-210ENST00000566612 V9GY48 417 aaPredicted RBP13.3□□□□□ -0.28
CDH1-210ENST00000566612 FAM98CQ17RN3 349 aaKnown RBP13.29□□□□□ -0.28
CDH1-210ENST00000566612 WWC3Q9ULE0 1092 aa13.29□□□□□ -0.28
CDH1-210ENST00000566612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.29□□□□□ -0.28
CDH1-210ENST00000566612 IFNL3Q8IZI9 196 aa13.29□□□□□ -0.28
CDH1-210ENST00000566612 KRI1Q8N9T8 703 aaKnown RBP13.29□□□□□ -0.28
CDH1-210ENST00000566612 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
CDH1-210ENST00000566612 FOXO4P98177 505 aa13.29□□□□□ -0.28
CDH1-210ENST00000566612 ARHGAP29Q52LW3 1261 aa13.29□□□□□ -0.28
CDH1-210ENST00000566612 PARP10Q53GL7 1025 aa13.29□□□□□ -0.28
CDH1-210ENST00000566612 FBXO18Q8NFZ0 1043 aa13.29□□□□□ -0.28
CDH1-210ENST00000566612 AK7Q96M32 723 aa13.29□□□□□ -0.28
CDH1-210ENST00000566612 AIFM3Q96NN9 605 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms