RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 DZIP1LQ8IYY4 767 aaKnown RBP23.69■■□□□ 1.38
ABCA3-204ENST00000566200 PDE8BO95263 885 aa23.68■■□□□ 1.38
ABCA3-204ENST00000566200 INHBEP58166 350 aa23.68■■□□□ 1.38
ABCA3-204ENST00000566200 METTL24Q5JXM2 366 aa23.68■■□□□ 1.38
ABCA3-204ENST00000566200 ALDH1A1P00352 501 aa23.67■■□□□ 1.38
ABCA3-204ENST00000566200 IREB2P48200 963 aaKnown RBP23.67■■□□□ 1.38
ABCA3-204ENST00000566200 CHAF1AQ13111 956 aaPredicted RBP23.66■■□□□ 1.38
ABCA3-204ENST00000566200 TNFAIP1Q13829 316 aa23.66■■□□□ 1.38
ABCA3-204ENST00000566200 FBXO46Q6PJ61 603 aaPredicted RBP23.66■■□□□ 1.38
ABCA3-204ENST00000566200 ANKRD13AQ8IZ07 590 aa23.66■■□□□ 1.38
ABCA3-204ENST00000566200 CDCA7LQ96GN5 454 aa23.66■■□□□ 1.38
ABCA3-204ENST00000566200 TCP10L2B9ZVM9 353 aa23.65■■□□□ 1.38
ABCA3-204ENST00000566200 FGFR2P21802 821 aa23.65■■□□□ 1.38
ABCA3-204ENST00000566200 RFX5P48382 616 aaPredicted RBP23.65■■□□□ 1.38
ABCA3-204ENST00000566200 BCAMP50895 628 aa23.65■■□□□ 1.38
ABCA3-204ENST00000566200 TMEM39BQ9GZU3 492 aa23.65■■□□□ 1.38
ABCA3-204ENST00000566200 VPS37DQ86XT2 251 aa23.64■■□□□ 1.37
ABCA3-204ENST00000566200 PTPN18Q99952 460 aa23.64■■□□□ 1.37
ABCA3-204ENST00000566200 MYH13Q9UKX3 1938 aa23.63■■□□□ 1.37
ABCA3-204ENST00000566200 TESPA1A2RU30 521 aaPredicted RBP23.63■■□□□ 1.37
ABCA3-204ENST00000566200 SLC34A2O95436 690 aa23.63■■□□□ 1.37
ABCA3-204ENST00000566200 HDLBPQ00341 1268 aaKnown RBP23.63■■□□□ 1.37
ABCA3-204ENST00000566200 CAVIN4Q5BKX8 364 aa23.63■■□□□ 1.37
ABCA3-204ENST00000566200 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.63■■□□□ 1.37
ABCA3-204ENST00000566200 ELP3Q9H9T3 547 aa23.63■■□□□ 1.37
ABCA3-204ENST00000566200 HTTP42858 3142 aa23.62■■□□□ 1.37
ABCA3-204ENST00000566200 CACNB3P54284 484 aa23.62■■□□□ 1.37
ABCA3-204ENST00000566200 ALDH1L2Q3SY69 923 aa23.62■■□□□ 1.37
ABCA3-204ENST00000566200 TRMT2AQ8IZ69 625 aaKnown RBP23.62■■□□□ 1.37
ABCA3-204ENST00000566200 TBC1D22AQ8WUA7 517 aa23.62■■□□□ 1.37
ABCA3-204ENST00000566200 CNKSR2Q8WXI2 1034 aa23.62■■□□□ 1.37
ABCA3-204ENST00000566200 OPTNQ96CV9 577 aa23.62■■□□□ 1.37
ABCA3-204ENST00000566200 KIF16BQ96L93 1317 aa23.61■■□□□ 1.37
ABCA3-204ENST00000566200 CRHR2Q13324 411 aa23.61■■□□□ 1.37
ABCA3-204ENST00000566200 MS4A4AQ96JQ5 239 aa23.61■■□□□ 1.37
ABCA3-204ENST00000566200 EYA2O00167 538 aa23.6■■□□□ 1.37
ABCA3-204ENST00000566200 FRAT2O75474 233 aaPredicted RBP23.6■■□□□ 1.37
ABCA3-204ENST00000566200 PUM3Q15397 648 aaKnown RBP23.6■■□□□ 1.37
ABCA3-204ENST00000566200 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.6■■□□□ 1.37
ABCA3-204ENST00000566200 TEKT1Q969V4 418 aa23.6■■□□□ 1.37
ABCA3-204ENST00000566200 TNNI2P48788 182 aa23.59■■□□□ 1.37
ABCA3-204ENST00000566200 CAP1Q01518 475 aa23.59■■□□□ 1.37
ABCA3-204ENST00000566200 VGLL4Q14135 290 aa23.59■■□□□ 1.37
ABCA3-204ENST00000566200 OTOP1Q7RTM1 612 aa23.59■■□□□ 1.37
ABCA3-204ENST00000566200 ATG9AQ7Z3C6 839 aa23.59■■□□□ 1.37
ABCA3-204ENST00000566200 ZDHHC15Q96MV8 337 aa23.59■■□□□ 1.37
ABCA3-204ENST00000566200 SMC4Q9NTJ3 1288 aa23.59■■□□□ 1.37
ABCA3-204ENST00000566200 PDE4DIPQ5VU43 2346 aa23.58■■□□□ 1.37
ABCA3-204ENST00000566200 APOBEC3HQ6NTF7 200 aaKnown RBP23.58■■□□□ 1.37
ABCA3-204ENST00000566200 MRIQ9BWK5 157 aa23.58■■□□□ 1.37
ABCA3-204ENST00000566200 TRIM17Q9Y577 477 aa23.58■■□□□ 1.37
ABCA3-204ENST00000566200 IFIT1P09914 478 aaKnown RBP23.57■■□□□ 1.36
ABCA3-204ENST00000566200 BRI3BPQ8WY22 251 aa23.57■■□□□ 1.36
ABCA3-204ENST00000566200 MAP3K9P80192 1104 aa23.56■■□□□ 1.36
ABCA3-204ENST00000566200 CD99L2Q8TCZ2 262 aa23.56■■□□□ 1.36
ABCA3-204ENST00000566200 SUGT1Q9Y2Z0 365 aa23.56■■□□□ 1.36
ABCA3-204ENST00000566200 OTUD7BQ6GQQ9 843 aa23.55■■□□□ 1.36
ABCA3-204ENST00000566200 LPIN2Q92539 896 aa23.55■■□□□ 1.36
ABCA3-204ENST00000566200 SLC5A1P13866 664 aa23.54■■□□□ 1.36
ABCA3-204ENST00000566200 FKBP1CQ5VVH2 108 aa23.54■■□□□ 1.36
ABCA3-204ENST00000566200 HHIPL2Q6UWX4 724 aa23.54■■□□□ 1.36
ABCA3-204ENST00000566200 FAM83AQ86UY5 434 aa23.54■■□□□ 1.36
ABCA3-204ENST00000566200 ERO1AQ96HE7 468 aa23.54■■□□□ 1.36
ABCA3-204ENST00000566200 SNCAIPQ9Y6H5 919 aa23.54■■□□□ 1.36
ABCA3-204ENST00000566200 MAST3O60307 1309 aa23.54■■□□□ 1.36
ABCA3-204ENST00000566200 UBTFL1P0CB47 393 aaPredicted RBP23.53■■□□□ 1.36
ABCA3-204ENST00000566200 OTUD5Q96G74 571 aa23.53■■□□□ 1.36
ABCA3-204ENST00000566200 SIL1Q9H173 461 aa23.53■■□□□ 1.36
ABCA3-204ENST00000566200 NOB1Q9ULX3 412 aaKnown RBP23.53■■□□□ 1.36
ABCA3-204ENST00000566200 CSADQ9Y600 493 aa23.53■■□□□ 1.36
ABCA3-204ENST00000566200 RBBP6Q7Z6E9 1792 aaKnown RBP23.52■■□□□ 1.36
ABCA3-204ENST00000566200 CCL15-CCL14A0A0B4J2E2 113 aa23.52■■□□□ 1.36
ABCA3-204ENST00000566200 SPDYE5A6NIY4 337 aa23.52■■□□□ 1.36
ABCA3-204ENST00000566200 CCL15Q16663 113 aa23.52■■□□□ 1.36
ABCA3-204ENST00000566200 FAM43AQ8N2R8 423 aa23.52■■□□□ 1.36
ABCA3-204ENST00000566200 PTPN22Q9Y2R2 807 aa23.52■■□□□ 1.36
ABCA3-204ENST00000566200 RPAP1Q9BWH6 1393 aaPredicted RBP23.52■■□□□ 1.36
ABCA3-204ENST00000566200 CENPFP49454 3210 aa23.52■■□□□ 1.35
ABCA3-204ENST00000566200 CIAO1O76071 339 aa23.51■■□□□ 1.35
ABCA3-204ENST00000566200 GTF2A2P52657 109 aa23.51■■□□□ 1.35
ABCA3-204ENST00000566200 SP3Q02447 781 aa23.51■■□□□ 1.35
ABCA3-204ENST00000566200 WDR66Q8TBY9 1149 aa23.51■■□□□ 1.35
ABCA3-204ENST00000566200 ZKSCAN4Q969J2 545 aaPredicted RBP23.51■■□□□ 1.35
ABCA3-204ENST00000566200 TMOD2Q9NZR1 351 aa23.51■■□□□ 1.35
ABCA3-204ENST00000566200 ZSWIM8A7E2V4 1837 aa23.5■■□□□ 1.35
ABCA3-204ENST00000566200 WRNIP1Q96S55 665 aa23.5■■□□□ 1.35
ABCA3-204ENST00000566200 FBXO3Q9UK99 471 aa23.5■■□□□ 1.35
ABCA3-204ENST00000566200 DAGLAQ9Y4D2 1042 aa23.5■■□□□ 1.35
ABCA3-204ENST00000566200 LRRFIP2Q9Y608 721 aaKnown RBP23.5■■□□□ 1.35
ABCA3-204ENST00000566200 PRDX5P30044 214 aa23.49■■□□□ 1.35
ABCA3-204ENST00000566200 DIXDC1Q155Q3 683 aa23.49■■□□□ 1.35
ABCA3-204ENST00000566200 ATP2B3Q16720 1220 aa23.49■■□□□ 1.35
ABCA3-204ENST00000566200 PA2G4Q9UQ80 394 aaKnown RBP23.49■■□□□ 1.35
ABCA3-204ENST00000566200 POTEFA5A3E0 1075 aa23.48■■□□□ 1.35
ABCA3-204ENST00000566200 CT47B1P0C2W7 299 aaPredicted RBP23.48■■□□□ 1.35
ABCA3-204ENST00000566200 TAF1CQ15572 869 aaPredicted RBP23.48■■□□□ 1.35
ABCA3-204ENST00000566200 PRPF38BQ5VTL8 546 aaKnown RBP23.48■■□□□ 1.35
ABCA3-204ENST00000566200 MEIS3Q99687 375 aa23.48■■□□□ 1.35
ABCA3-204ENST00000566200 EFCC1Q9HA90 598 aa23.48■■□□□ 1.35
ABCA3-204ENST00000566200 PHKA1P46020 1223 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms