RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 ANKRD13AQ8IZ07 590 aa20.56■□□□□ 0.88
AC004449.1-201ENST00000564240 HPS5Q9UPZ3 1129 aa20.56■□□□□ 0.88
AC004449.1-201ENST00000564240 A0A1B0GUL6 1792 aa20.55■□□□□ 0.88
AC004449.1-201ENST00000564240 ALDH1L2Q3SY69 923 aa20.55■□□□□ 0.88
AC004449.1-201ENST00000564240 IFNL1Q8IU54 200 aa20.55■□□□□ 0.88
AC004449.1-201ENST00000564240 CDCA7LQ96GN5 454 aa20.55■□□□□ 0.88
AC004449.1-201ENST00000564240 TEKT1Q969V4 418 aa20.54■□□□□ 0.88
AC004449.1-201ENST00000564240 R3HDMLQ9H3Y0 253 aa20.54■□□□□ 0.88
AC004449.1-201ENST00000564240 ELP3Q9H9T3 547 aa20.54■□□□□ 0.88
AC004449.1-201ENST00000564240 TMOD2Q9NZR1 351 aa20.54■□□□□ 0.88
AC004449.1-201ENST00000564240 SLC5A1P13866 664 aa20.53■□□□□ 0.88
AC004449.1-201ENST00000564240 PUM3Q15397 648 aaKnown RBP20.53■□□□□ 0.88
AC004449.1-201ENST00000564240 NOM1Q5C9Z4 860 aaKnown RBP20.53■□□□□ 0.88
AC004449.1-201ENST00000564240 EYA2O00167 538 aa20.52■□□□□ 0.88
AC004449.1-201ENST00000564240 UBTFL1P0CB47 393 aaPredicted RBP20.52■□□□□ 0.88
AC004449.1-201ENST00000564240 GRIK5Q16478 980 aa20.52■□□□□ 0.88
AC004449.1-201ENST00000564240 TMEM39BQ9GZU3 492 aa20.52■□□□□ 0.88
AC004449.1-201ENST00000564240 ECM29Q5VYK3 1845 aa20.52■□□□□ 0.88
AC004449.1-201ENST00000564240 HDLBPQ00341 1268 aaKnown RBP20.51■□□□□ 0.87
AC004449.1-201ENST00000564240 FBXO46Q6PJ61 603 aaPredicted RBP20.51■□□□□ 0.87
AC004449.1-201ENST00000564240 CFHR5Q9BXR6 569 aa20.51■□□□□ 0.87
AC004449.1-201ENST00000564240 HDAC5Q9UQL6 1122 aa20.51■□□□□ 0.87
AC004449.1-201ENST00000564240 CSADQ9Y600 493 aa20.51■□□□□ 0.87
AC004449.1-201ENST00000564240 CACNB3P54284 484 aa20.5■□□□□ 0.87
AC004449.1-201ENST00000564240 MAP3K9P80192 1104 aa20.5■□□□□ 0.87
AC004449.1-201ENST00000564240 VGLL2Q8N8G2 317 aa20.5■□□□□ 0.87
AC004449.1-201ENST00000564240 OPTNQ96CV9 577 aa20.5■□□□□ 0.87
AC004449.1-201ENST00000564240 SIL1Q9H173 461 aa20.5■□□□□ 0.87
AC004449.1-201ENST00000564240 NOB1Q9ULX3 412 aaKnown RBP20.5■□□□□ 0.87
AC004449.1-201ENST00000564240 TRIM17Q9Y577 477 aa20.5■□□□□ 0.87
AC004449.1-201ENST00000564240 SSC5DA1L4H1 1573 aa20.5■□□□□ 0.87
AC004449.1-201ENST00000564240 MAST3O60307 1309 aa20.5■□□□□ 0.87
AC004449.1-201ENST00000564240 IGF2BP3O00425 579 aaKnown RBP eCLIP20.49■□□□□ 0.87
AC004449.1-201ENST00000564240 CEP126Q9P2H0 1117 aa20.49■□□□□ 0.87
AC004449.1-201ENST00000564240 GJA5P36382 358 aa20.48■□□□□ 0.87
AC004449.1-201ENST00000564240 CDAN1Q8IWY9 1227 aa20.48■□□□□ 0.87
AC004449.1-201ENST00000564240 WDR66Q8TBY9 1149 aa20.48■□□□□ 0.87
AC004449.1-201ENST00000564240 LPIN2Q92539 896 aa20.48■□□□□ 0.87
AC004449.1-201ENST00000564240 API5Q9BZZ5 524 aaKnown RBP20.48■□□□□ 0.87
AC004449.1-201ENST00000564240 HOOK2Q96ED9 719 aa20.47■□□□□ 0.87
AC004449.1-201ENST00000564240 ERO1AQ96HE7 468 aa20.47■□□□□ 0.87
AC004449.1-201ENST00000564240 TEPSINQ96N21 525 aa20.47■□□□□ 0.87
AC004449.1-201ENST00000564240 MRIQ9BWK5 157 aa20.47■□□□□ 0.87
AC004449.1-201ENST00000564240 GNL3LQ9NVN8 582 aaKnown RBP20.47■□□□□ 0.87
AC004449.1-201ENST00000564240 FGFR2P21802 821 aa20.46■□□□□ 0.87
AC004449.1-201ENST00000564240 RFX5P48382 616 aaPredicted RBP20.46■□□□□ 0.87
AC004449.1-201ENST00000564240 ZDHHC15Q96MV8 337 aa20.46■□□□□ 0.87
AC004449.1-201ENST00000564240 SUGT1Q9Y2Z0 365 aa20.46■□□□□ 0.87
AC004449.1-201ENST00000564240 WDHD1O75717 1129 aaPredicted RBP20.45■□□□□ 0.86
AC004449.1-201ENST00000564240 CT47B1P0C2W7 299 aaPredicted RBP20.45■□□□□ 0.86
AC004449.1-201ENST00000564240 GTF2A2P52657 109 aa20.45■□□□□ 0.86
AC004449.1-201ENST00000564240 CRHR2Q13324 411 aa20.45■□□□□ 0.86
AC004449.1-201ENST00000564240 VGLL4Q14135 290 aa20.45■□□□□ 0.86
AC004449.1-201ENST00000564240 ATP2B3Q16720 1220 aa20.45■□□□□ 0.86
AC004449.1-201ENST00000564240 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.45■□□□□ 0.86
AC004449.1-201ENST00000564240 OTUD5Q96G74 571 aa20.45■□□□□ 0.86
AC004449.1-201ENST00000564240 CCL15-CCL14A0A0B4J2E2 113 aa20.44■□□□□ 0.86
AC004449.1-201ENST00000564240 CCL15Q16663 113 aa20.44■□□□□ 0.86
AC004449.1-201ENST00000564240 HHIPL2Q6UWX4 724 aa20.44■□□□□ 0.86
AC004449.1-201ENST00000564240 CD99L2Q8TCZ2 262 aa20.44■□□□□ 0.86
AC004449.1-201ENST00000564240 CNKSR2Q8WXI2 1034 aa20.44■□□□□ 0.86
AC004449.1-201ENST00000564240 PTPN18Q99952 460 aa20.44■□□□□ 0.86
AC004449.1-201ENST00000564240 LRRFIP2Q9Y608 721 aaKnown RBP20.44■□□□□ 0.86
AC004449.1-201ENST00000564240 KIF16BQ96L93 1317 aa20.44■□□□□ 0.86
AC004449.1-201ENST00000564240 SP3Q02447 781 aa20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 TAF1CQ15572 869 aaPredicted RBP20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 DCAF15Q66K64 600 aa20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 APOBEC3HQ6NTF7 200 aaKnown RBP20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 OTOP1Q7RTM1 612 aa20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 ATG9AQ7Z3C6 839 aa20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 TRMT2AQ8IZ69 625 aaKnown RBP20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 WRNIP1Q96S55 665 aa20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 EFCC1Q9HA90 598 aa20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 ZFYVE28Q9HCC9 887 aa20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 FBXO3Q9UK99 471 aa20.43■□□□□ 0.86
AC004449.1-201ENST00000564240 TESPA1A2RU30 521 aaPredicted RBP20.42■□□□□ 0.86
AC004449.1-201ENST00000564240 IL15P40933 162 aaPredicted RBP20.42■□□□□ 0.86
AC004449.1-201ENST00000564240 FAM83AQ86UY5 434 aa20.42■□□□□ 0.86
AC004449.1-201ENST00000564240 CIAO1O76071 339 aa20.41■□□□□ 0.86
AC004449.1-201ENST00000564240 LDHBP07195 334 aaKnown RBP20.41■□□□□ 0.86
AC004449.1-201ENST00000564240 TCP10Q12799 353 aa20.41■□□□□ 0.86
AC004449.1-201ENST00000564240 ARHGEF6Q15052 776 aa20.41■□□□□ 0.86
AC004449.1-201ENST00000564240 FKBP1CQ5VVH2 108 aa20.41■□□□□ 0.86
AC004449.1-201ENST00000564240 MIGA2Q7L4E1 593 aa20.41■□□□□ 0.86
AC004449.1-201ENST00000564240 ZKSCAN4Q969J2 545 aaPredicted RBP20.41■□□□□ 0.86
AC004449.1-201ENST00000564240 MS4A4AQ96JQ5 239 aa20.41■□□□□ 0.86
AC004449.1-201ENST00000564240 PA2G4Q9UQ80 394 aaKnown RBP20.41■□□□□ 0.86
AC004449.1-201ENST00000564240 PDE4DIPQ5VU43 2346 aa20.41■□□□□ 0.86
AC004449.1-201ENST00000564240 BRI3BPQ8WY22 251 aa20.4■□□□□ 0.86
AC004449.1-201ENST00000564240 ZNF341Q9BYN7 854 aa20.4■□□□□ 0.86
AC004449.1-201ENST00000564240 USP40Q9NVE5 1235 aa20.4■□□□□ 0.86
AC004449.1-201ENST00000564240 DENND2AQ9ULE3 1009 aa20.4■□□□□ 0.86
AC004449.1-201ENST00000564240 AK9Q5TCS8 1911 aa20.39■□□□□ 0.86
AC004449.1-201ENST00000564240 CCER2I3L3R5 266 aa20.39■□□□□ 0.85
AC004449.1-201ENST00000564240 CETPP11597 493 aa20.39■□□□□ 0.85
AC004449.1-201ENST00000564240 DIXDC1Q155Q3 683 aa20.39■□□□□ 0.85
AC004449.1-201ENST00000564240 ERO1BQ86YB8 467 aa20.39■□□□□ 0.85
AC004449.1-201ENST00000564240 FAM151AQ8WW52 585 aa20.39■□□□□ 0.85
AC004449.1-201ENST00000564240 PTPN22Q9Y2R2 807 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms