RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CRKP46108 304 aa23.57■■□□□ 1.36
NME3-204ENST00000563498 TNNI2P48788 182 aa23.57■■□□□ 1.36
NME3-204ENST00000563498 SP3Q02447 781 aa23.57■■□□□ 1.36
NME3-204ENST00000563498 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.57■■□□□ 1.36
NME3-204ENST00000563498 CD99L2Q8TCZ2 262 aa23.57■■□□□ 1.36
NME3-204ENST00000563498 MS4A4AQ96JQ5 239 aa23.57■■□□□ 1.36
NME3-204ENST00000563498 RBBP6Q7Z6E9 1792 aaKnown RBP23.57■■□□□ 1.36
NME3-204ENST00000563498 HDLBPQ00341 1268 aaKnown RBP23.56■■□□□ 1.36
NME3-204ENST00000563498 FBXO33Q7Z6M2 555 aa23.56■■□□□ 1.36
NME3-204ENST00000563498 ARMC5Q96C12 935 aa23.56■■□□□ 1.36
NME3-204ENST00000563498 EFCC1Q9HA90 598 aa23.56■■□□□ 1.36
NME3-204ENST00000563498 ANP32CO43423 234 aa23.55■■□□□ 1.36
NME3-204ENST00000563498 NBPF7P0C2Y1 421 aaPredicted RBP23.55■■□□□ 1.36
NME3-204ENST00000563498 RABL6Q3YEC7 729 aaPredicted RBP23.55■■□□□ 1.36
NME3-204ENST00000563498 CDAN1Q8IWY9 1227 aa23.55■■□□□ 1.36
NME3-204ENST00000563498 TBC1D22AQ8WUA7 517 aa23.55■■□□□ 1.36
NME3-204ENST00000563498 GCC1Q96CN9 775 aa23.55■■□□□ 1.36
NME3-204ENST00000563498 POTEFA5A3E0 1075 aa23.54■■□□□ 1.36
NME3-204ENST00000563498 TCP10L2B9ZVM9 353 aa23.54■■□□□ 1.36
NME3-204ENST00000563498 GTF2A2P52657 109 aa23.54■■□□□ 1.36
NME3-204ENST00000563498 MAP3K9P80192 1104 aa23.54■■□□□ 1.36
NME3-204ENST00000563498 VPS37DQ86XT2 251 aa23.54■■□□□ 1.36
NME3-204ENST00000563498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.54■■□□□ 1.362e-7■■■■□ 21.2
NME3-204ENST00000563498 TMEM39BQ9GZU3 492 aa23.54■■□□□ 1.36
NME3-204ENST00000563498 VGLL4Q14135 290 aa23.53■■□□□ 1.36
NME3-204ENST00000563498 CAVIN4Q5BKX8 364 aa23.53■■□□□ 1.36
NME3-204ENST00000563498 BRI3BPQ8WY22 251 aa23.53■■□□□ 1.36
NME3-204ENST00000563498 ARHGEF6Q15052 776 aa23.52■■□□□ 1.36
NME3-204ENST00000563498 MRIQ9BWK5 157 aa23.52■■□□□ 1.36
NME3-204ENST00000563498 BICC1Q9H694 974 aaKnown RBP23.52■■□□□ 1.36
NME3-204ENST00000563498 CSADQ9Y600 493 aa23.52■■□□□ 1.36
NME3-204ENST00000563498 CCL15-CCL14A0A0B4J2E2 113 aa23.51■■□□□ 1.35
NME3-204ENST00000563498 GRIK5Q16478 980 aa23.51■■□□□ 1.35
NME3-204ENST00000563498 CCL15Q16663 113 aa23.51■■□□□ 1.35
NME3-204ENST00000563498 VGLL2Q8N8G2 317 aa23.51■■□□□ 1.35
NME3-204ENST00000563498 CNKSR2Q8WXI2 1034 aa23.51■■□□□ 1.35
NME3-204ENST00000563498 TEKT1Q969V4 418 aa23.51■■□□□ 1.35
NME3-204ENST00000563498 ZFYVE28Q9HCC9 887 aa23.51■■□□□ 1.35
NME3-204ENST00000563498 PDE8BO95263 885 aa23.5■■□□□ 1.35
NME3-204ENST00000563498 CAP1Q01518 475 aa23.5■■□□□ 1.35
NME3-204ENST00000563498 TAF1CQ15572 869 aaPredicted RBP23.5■■□□□ 1.35
NME3-204ENST00000563498 METTL24Q5JXM2 366 aa23.5■■□□□ 1.35
NME3-204ENST00000563498 ANKRD44Q8N8A2 993 aa23.5■■□□□ 1.35
NME3-204ENST00000563498 SPDYE5A6NIY4 337 aa23.49■■□□□ 1.35
NME3-204ENST00000563498 FRAT2O75474 233 aaPredicted RBP23.49■■□□□ 1.35
NME3-204ENST00000563498 CHAF1AQ13111 956 aaPredicted RBP23.49■■□□□ 1.35
NME3-204ENST00000563498 LRRC24Q50LG9 513 aa23.49■■□□□ 1.35
NME3-204ENST00000563498 FKBP1CQ5VVH2 108 aa23.49■■□□□ 1.35
NME3-204ENST00000563498 FAM83AQ86UY5 434 aa23.49■■□□□ 1.35
NME3-204ENST00000563498 HOOK2Q96ED9 719 aa23.49■■□□□ 1.35
NME3-204ENST00000563498 ZDHHC15Q96MV8 337 aa23.49■■□□□ 1.35
NME3-204ENST00000563498 IQSEC3Q9UPP2 1182 aaPredicted RBP23.49■■□□□ 1.35
NME3-204ENST00000563498 SUGT1Q9Y2Z0 365 aa23.49■■□□□ 1.35
NME3-204ENST00000563498 KIF16BQ96L93 1317 aa23.49■■□□□ 1.35
NME3-204ENST00000563498 OTUD5Q96G74 571 aa23.48■■□□□ 1.35
NME3-204ENST00000563498 ZCCHC17Q9NP64 241 aaKnown RBP23.48■■□□□ 1.35
NME3-204ENST00000563498 TMOD2Q9NZR1 351 aa23.48■■□□□ 1.35
NME3-204ENST00000563498 MAST3O60307 1309 aa23.48■■□□□ 1.35
NME3-204ENST00000563498 CENPFP49454 3210 aa23.47■■□□□ 1.35
NME3-204ENST00000563498 WDHD1O75717 1129 aaPredicted RBP23.47■■□□□ 1.35
NME3-204ENST00000563498 ERO1BQ86YB8 467 aa23.47■■□□□ 1.35
NME3-204ENST00000563498 FAM43AQ8N2R8 423 aa23.47■■□□□ 1.35
NME3-204ENST00000563498 ZNF333Q96JL9 665 aa23.47■■□□□ 1.35
NME3-204ENST00000563498 ZNF521Q96K83 1311 aa23.47■■□□□ 1.35
NME3-204ENST00000563498 PTPRCP08575 1304 aa23.46■■□□□ 1.35
NME3-204ENST00000563498 CETPP11597 493 aa23.46■■□□□ 1.35
NME3-204ENST00000563498 RPAP1Q9BWH6 1393 aaPredicted RBP23.46■■□□□ 1.35
NME3-204ENST00000563498 SNCAIPQ9Y6H5 919 aa23.46■■□□□ 1.35
NME3-204ENST00000563498 MKI67P46013 3256 aaKnown RBP23.45■■□□□ 1.34
NME3-204ENST00000563498 BCAMP50895 628 aa23.45■■□□□ 1.34
NME3-204ENST00000563498 CACNB3P54284 484 aa23.45■■□□□ 1.34
NME3-204ENST00000563498 APOBEC3HQ6NTF7 200 aaKnown RBP23.45■■□□□ 1.34
NME3-204ENST00000563498 HHIPL2Q6UWX4 724 aa23.45■■□□□ 1.34
NME3-204ENST00000563498 NBPF11Q86T75 865 aa23.45■■□□□ 1.34
NME3-204ENST00000563498 MRPL50Q8N5N7 158 aaKnown RBP23.45■■□□□ 1.34
NME3-204ENST00000563498 TMEM106CQ9BVX2 250 aa23.45■■□□□ 1.34
NME3-204ENST00000563498 KIAA0100Q14667 2235 aaKnown RBP23.45■■□□□ 1.34
NME3-204ENST00000563498 EN2P19622 333 aaPredicted RBP23.44■■□□□ 1.34
NME3-204ENST00000563498 PUM3Q15397 648 aaKnown RBP23.44■■□□□ 1.34
NME3-204ENST00000563498 FAM9BQ8IZU0 186 aa23.44■■□□□ 1.34
NME3-204ENST00000563498 WRNIP1Q96S55 665 aa23.44■■□□□ 1.34
NME3-204ENST00000563498 TLR2O60603 784 aa23.43■■□□□ 1.34
NME3-204ENST00000563498 IFIT1P09914 478 aaKnown RBP23.43■■□□□ 1.34
NME3-204ENST00000563498 FGFR2P21802 821 aa23.43■■□□□ 1.34
NME3-204ENST00000563498 SNAPC2Q13487 334 aa23.43■■□□□ 1.34
NME3-204ENST00000563498 SLC9C1Q4G0N8 1177 aa23.43■■□□□ 1.34
NME3-204ENST00000563498 DCAF15Q66K64 600 aa23.43■■□□□ 1.34
NME3-204ENST00000563498 PTCH2Q9Y6C5 1203 aa23.43■■□□□ 1.34
NME3-204ENST00000563498 PPIL2Q13356 520 aa23.42■■□□□ 1.34
NME3-204ENST00000563498 KLHDC4Q8TBB5 520 aa23.42■■□□□ 1.34
NME3-204ENST00000563498 ZKSCAN4Q969J2 545 aaPredicted RBP23.42■■□□□ 1.34
NME3-204ENST00000563498 USP44Q9H0E7 712 aa23.42■■□□□ 1.34
NME3-204ENST00000563498 IRF6O14896 467 aa23.41■■□□□ 1.34
NME3-204ENST00000563498 GNRH1P01148 92 aa23.41■■□□□ 1.34
NME3-204ENST00000563498 HABP4Q5JVS0 413 aaKnown RBP23.41■■□□□ 1.34
NME3-204ENST00000563498 BRCA2P51587 3418 aa23.41■■□□□ 1.34
NME3-204ENST00000563498 BTBD19C9JJ37 291 aa23.4■■□□□ 1.34
NME3-204ENST00000563498 LACTBP83111 547 aaPredicted RBP23.4■■□□□ 1.34
NME3-204ENST00000563498 PPATQ06203 517 aa23.4■■□□□ 1.34
NME3-204ENST00000563498 KIF22Q14807 665 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms