RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 RUSC1Q9BVN2 902 aa8.47□□□□□ -1.05
LINC00254-201ENST00000563416 TPSG1Q9NRR2 321 aa8.47□□□□□ -1.05
LINC00254-201ENST00000563416 AKAP2Q9Y2D5 859 aa8.47□□□□□ -1.05
LINC00254-201ENST00000563416 GNA15P30679 374 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 Q6ZS46 218 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 KIAA1211Q6ZU35 1233 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 TP53INP1Q96A56 240 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 CORO1BQ9BR76 489 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 C12orf49Q9H741 205 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 GPN3Q9UHW5 284 aaPredicted RBP8.46□□□□□ -1.06
LINC00254-201ENST00000563416 BICRAQ9NZM4 1560 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 LOC100289279A0A1B0GTE1 492 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 HNRNPUQ00839 825 aaKnown RBP eCLIP8.45□□□□□ -1.06
LINC00254-201ENST00000563416 AP3B2Q13367 1082 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 ANKRD34AQ69YU3 496 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
LINC00254-201ENST00000563416 MEGF10Q96KG7 1140 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 OSBPL7Q9BZF2 842 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 PPM1HQ9ULR3 514 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 MEGF11A6BM72 1044 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 SART1O43290 800 aaKnown RBP8.44□□□□□ -1.06
LINC00254-201ENST00000563416 EIF4BP23588 611 aaKnown RBP8.44□□□□□ -1.06
LINC00254-201ENST00000563416 ITGAEP38570 1179 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 POU4F3Q15319 338 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 NUTM2GQ5VZR2 741 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 FDX2Q6P4F2 183 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 DUSP9Q99956 384 aaKnown RBP8.44□□□□□ -1.06
LINC00254-201ENST00000563416 SSBP4Q9BWG4 385 aaPredicted RBP8.44□□□□□ -1.06
LINC00254-201ENST00000563416 CYP4F12Q9HCS2 524 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 TMEM39AQ9NV64 488 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 MAOBP27338 520 aa8.43□□□□□ -1.06
LINC00254-201ENST00000563416 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
LINC00254-201ENST00000563416 UVSSAQ2YD98 709 aa8.43□□□□□ -1.06
LINC00254-201ENST00000563416 EXOSC6Q5RKV6 272 aaKnown RBP8.43□□□□□ -1.06
LINC00254-201ENST00000563416 CEP44Q9C0F1 390 aa8.43□□□□□ -1.06
LINC00254-201ENST00000563416 NRSN2Q9GZP1 204 aa8.43□□□□□ -1.06
LINC00254-201ENST00000563416 FURINP09958 794 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 H2AFB1P0C5Y9 115 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 H2AFB2P0C5Z0 115 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 ZNF157P51786 506 aaPredicted RBP8.42□□□□□ -1.06
LINC00254-201ENST00000563416 FAAP100Q0VG06 881 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 BCL11AQ9H165 835 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 SCRIBQ14160 1630 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 USP17L7P0C7H9 530 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 FBXO33Q7Z6M2 555 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 TRIM56Q9BRZ2 755 aaKnown RBP8.41□□□□□ -1.06
LINC00254-201ENST00000563416 TMPRSS13Q9BYE2 586 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 SUGCTQ9HAC7 445 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 PARP2Q9UGN5 583 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 SAMM50Q9Y512 469 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 AK5Q9Y6K8 562 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 K7ELQ4 463 aaPredicted RBP8.4□□□□□ -1.06
LINC00254-201ENST00000563416 PSMD2Q13200 908 aa8.4□□□□□ -1.06
LINC00254-201ENST00000563416 RSPO4Q2I0M5 234 aaPredicted RBP8.4□□□□□ -1.06
LINC00254-201ENST00000563416 NKAPLQ5M9Q1 402 aa8.4□□□□□ -1.06
LINC00254-201ENST00000563416 SMG8Q8ND04 991 aaKnown RBP8.4□□□□□ -1.06
LINC00254-201ENST00000563416 ANKRD24Q8TF21 1146 aa8.4□□□□□ -1.06
LINC00254-201ENST00000563416 UTP4Q969X6 686 aaKnown RBP8.4□□□□□ -1.06
LINC00254-201ENST00000563416 DHX15O43143 795 aaKnown RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 MFAP1P55081 439 aaKnown RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 PDE3AQ14432 1141 aa8.39□□□□□ -1.07
LINC00254-201ENST00000563416 TPTE2Q6XPS3 522 aa8.39□□□□□ -1.07
LINC00254-201ENST00000563416 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 FAM46AQ96IP4 442 aaKnown RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 UBL7Q96S82 380 aaPredicted RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 BCL2L13Q9BXK5 485 aa8.39□□□□□ -1.07
LINC00254-201ENST00000563416 MRS2Q9HD23 443 aa8.39□□□□□ -1.07
LINC00254-201ENST00000563416 RAD18Q9NS91 495 aa8.39□□□□□ -1.07
LINC00254-201ENST00000563416 DAB2P98082 770 aa8.38□□□□□ -1.07
LINC00254-201ENST00000563416 ZNF326Q5BKZ1 582 aaKnown RBP8.38□□□□□ -1.07
LINC00254-201ENST00000563416 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
LINC00254-201ENST00000563416 EMILIN2Q9BXX0 1053 aa8.38□□□□□ -1.07
LINC00254-201ENST00000563416 TTF2Q9UNY4 1162 aaKnown RBP8.38□□□□□ -1.07
LINC00254-201ENST00000563416 HIF3AQ9Y2N7 669 aa8.38□□□□□ -1.07
LINC00254-201ENST00000563416 DYRK3O43781 588 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 DLGAP3O95886 979 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 GSTP1P09211 210 aaKnown RBP8.37□□□□□ -1.07
LINC00254-201ENST00000563416 NME2P22392 152 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 TRIM26Q12899 539 aaPredicted RBP8.37□□□□□ -1.07
LINC00254-201ENST00000563416 PRR23CQ6ZRP0 262 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.37□□□□□ -1.07
LINC00254-201ENST00000563416 TMC4Q7Z404 712 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 SULF2Q8IWU5 870 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 MYRFLQ96LU7 910 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 SEMA6BQ9H3T3 888 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 SHROOM4Q9ULL8 1493 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 SORBS3O60504 671 aa8.36□□□□□ -1.07
LINC00254-201ENST00000563416 ADAM23O75077 832 aa8.36□□□□□ -1.07
LINC00254-201ENST00000563416 PREPP48147 710 aa8.36□□□□□ -1.07
LINC00254-201ENST00000563416 KRT82Q9NSB4 513 aa8.36□□□□□ -1.07
LINC00254-201ENST00000563416 FBXO24O75426 580 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 TIAF1O95411 115 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 ECEL1O95672 775 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 CTSBP07858 339 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 ARNTP27540 789 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 SOX4Q06945 474 aaPredicted RBP8.35□□□□□ -1.07
LINC00254-201ENST00000563416 ARMC10Q8N2F6 343 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms