RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 GNAI2P04899 355 aa20.93■□□□□ 0.94
CLK3-210ENST00000563112 DZIP1LQ8IYY4 767 aaKnown RBP20.93■□□□□ 0.94
CLK3-210ENST00000563112 ZNF70Q9UC06 446 aaPredicted RBP20.93■□□□□ 0.94
CLK3-210ENST00000563112 ANGEL1Q9UNK9 670 aaKnown RBP20.93■□□□□ 0.94
CLK3-210ENST00000563112 SUGT1Q9Y2Z0 365 aa20.93■□□□□ 0.94
CLK3-210ENST00000563112 ARAP2Q8WZ64 1704 aa20.92■□□□□ 0.94
CLK3-210ENST00000563112 MTX1Q13505 466 aa20.92■□□□□ 0.94
CLK3-210ENST00000563112 SPDYE2Q495Y8 402 aa20.92■□□□□ 0.94
CLK3-210ENST00000563112 WDR66Q8TBY9 1149 aa20.92■□□□□ 0.94
CLK3-210ENST00000563112 CSRNP1Q96S65 589 aa20.92■□□□□ 0.94
CLK3-210ENST00000563112 TDRD3Q9H7E2 651 aaKnown RBP20.92■□□□□ 0.94
CLK3-210ENST00000563112 TNNQ9UQP3 1299 aa20.92■□□□□ 0.94
CLK3-210ENST00000563112 MAST3O60307 1309 aa20.92■□□□□ 0.94
CLK3-210ENST00000563112 RASA3Q14644 834 aa20.91■□□□□ 0.94
CLK3-210ENST00000563112 TEKT1Q969V4 418 aa20.91■□□□□ 0.94
CLK3-210ENST00000563112 MRIQ9BWK5 157 aa20.91■□□□□ 0.94
CLK3-210ENST00000563112 SAGE1Q9NXZ1 904 aa20.91■□□□□ 0.94
CLK3-210ENST00000563112 TNNI2P48788 182 aa20.9■□□□□ 0.94
CLK3-210ENST00000563112 GRIK5Q16478 980 aa20.9■□□□□ 0.94
CLK3-210ENST00000563112 FTSJ3Q8IY81 847 aaKnown RBP20.9■□□□□ 0.94
CLK3-210ENST00000563112 AKAP11Q9UKA4 1901 aa20.9■□□□□ 0.94
CLK3-210ENST00000563112 AOX1Q06278 1338 aa20.89■□□□□ 0.93
CLK3-210ENST00000563112 LDLRAD1Q5T700 205 aa20.89■□□□□ 0.93
CLK3-210ENST00000563112 TMEM57Q8N5G2 664 aa20.89■□□□□ 0.93
CLK3-210ENST00000563112 RNF186Q9NXI6 227 aa20.89■□□□□ 0.93
CLK3-210ENST00000563112 AKAP2Q9Y2D5 859 aa20.89■□□□□ 0.93
CLK3-210ENST00000563112 SEMA3EO15041 775 aa20.88■□□□□ 0.93
CLK3-210ENST00000563112 TRPA1O75762 1119 aa20.88■□□□□ 0.93
CLK3-210ENST00000563112 NBPF12Q5TAG4 269 aaPredicted RBP20.88■□□□□ 0.93
CLK3-210ENST00000563112 SLC10A4Q96EP9 437 aa20.88■□□□□ 0.93
CLK3-210ENST00000563112 TMOD2Q9NZR1 351 aa20.88■□□□□ 0.93
CLK3-210ENST00000563112 MYH13Q9UKX3 1938 aa20.88■□□□□ 0.93
CLK3-210ENST00000563112 UNCXA6NJT0 531 aa20.87■□□□□ 0.93
CLK3-210ENST00000563112 TCP10L2B9ZVM9 353 aa20.87■□□□□ 0.93
CLK3-210ENST00000563112 IREB2P48200 963 aaKnown RBP20.87■□□□□ 0.93
CLK3-210ENST00000563112 MAP3K11Q16584 847 aa20.87■□□□□ 0.93
CLK3-210ENST00000563112 ZDHHC15Q96MV8 337 aa20.87■□□□□ 0.93
CLK3-210ENST00000563112 DENND2AQ9ULE3 1009 aa20.87■□□□□ 0.93
CLK3-210ENST00000563112 G3BP1Q13283 466 aaKnown RBP eCLIP20.86■□□□□ 0.93
CLK3-210ENST00000563112 HHIPL2Q6UWX4 724 aa20.86■□□□□ 0.93
CLK3-210ENST00000563112 FZD1Q9UP38 647 aa20.86■□□□□ 0.93
CLK3-210ENST00000563112 CASP8AP2Q9UKL3 1982 aa20.85■□□□□ 0.93
CLK3-210ENST00000563112 PHKA1P46020 1223 aa20.85■□□□□ 0.93
CLK3-210ENST00000563112 TIMM10P62072 90 aa20.85■□□□□ 0.93
CLK3-210ENST00000563112 SREBF2Q12772 1141 aa20.85■□□□□ 0.93
CLK3-210ENST00000563112 TFCP2Q12800 502 aa20.85■□□□□ 0.93
CLK3-210ENST00000563112 MKRN3Q13064 507 aaKnown RBP20.85■□□□□ 0.93
CLK3-210ENST00000563112 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.85■□□□□ 0.93
CLK3-210ENST00000563112 LDHBP07195 334 aaKnown RBP20.84■□□□□ 0.93
CLK3-210ENST00000563112 SPRYD7Q5W111 196 aa20.84■□□□□ 0.93
CLK3-210ENST00000563112 CCDC102BQ68D86 513 aa20.84■□□□□ 0.93
CLK3-210ENST00000563112 ITPRIPQ8IWB1 547 aa20.84■□□□□ 0.93
CLK3-210ENST00000563112 ZGPATQ8N5A5 531 aaKnown RBP20.84■□□□□ 0.93
CLK3-210ENST00000563112 SSC5DA1L4H1 1573 aa20.84■□□□□ 0.93
CLK3-210ENST00000563112 A0A1B0GUL7 405 aa20.83■□□□□ 0.93
CLK3-210ENST00000563112 USP2O75604 605 aaPredicted RBP20.83■□□□□ 0.93
CLK3-210ENST00000563112 ADORA1P30542 326 aa20.83■□□□□ 0.93
CLK3-210ENST00000563112 TM4SF4P48230 202 aa20.83■□□□□ 0.93
CLK3-210ENST00000563112 MVPQ14764 893 aaKnown RBP20.83■□□□□ 0.93
CLK3-210ENST00000563112 ANKRD13AQ8IZ07 590 aa20.83■□□□□ 0.93
CLK3-210ENST00000563112 NEUROD6Q96NK8 337 aa20.83■□□□□ 0.93
CLK3-210ENST00000563112 SALL1Q9NSC2 1324 aa20.82■□□□□ 0.92
CLK3-210ENST00000563112 PNMA6EA0A0J9YXQ4 647 aa20.82■□□□□ 0.92
CLK3-210ENST00000563112 ZBTB22O15209 634 aa20.82■□□□□ 0.92
CLK3-210ENST00000563112 GORABQ5T7V8 394 aa20.82■□□□□ 0.92
CLK3-210ENST00000563112 FKBP1CQ5VVH2 108 aa20.82■□□□□ 0.92
CLK3-210ENST00000563112 APOBEC3HQ6NTF7 200 aaKnown RBP20.82■□□□□ 0.92
CLK3-210ENST00000563112 XAGE2Q96GT9 111 aa20.82■□□□□ 0.92
CLK3-210ENST00000563112 TMEM39BQ9GZU3 492 aa20.82■□□□□ 0.92
CLK3-210ENST00000563112 ZBTB48P10074 688 aaPredicted RBP20.81■□□□□ 0.92
CLK3-210ENST00000563112 CACNB3P54284 484 aa20.81■□□□□ 0.92
CLK3-210ENST00000563112 FAM83AQ86UY5 434 aa20.81■□□□□ 0.92
CLK3-210ENST00000563112 HOOK2Q96ED9 719 aa20.81■□□□□ 0.92
CLK3-210ENST00000563112 ABHD8Q96I13 439 aa20.81■□□□□ 0.92
CLK3-210ENST00000563112 CLMNQ96JQ2 1002 aa20.81■□□□□ 0.92
CLK3-210ENST00000563112 TEPSINQ96N21 525 aa20.81■□□□□ 0.92
CLK3-210ENST00000563112 MANSC4A6NHS7 340 aaPredicted RBP20.8■□□□□ 0.92
CLK3-210ENST00000563112 MS4A1P11836 297 aa20.8■□□□□ 0.92
CLK3-210ENST00000563112 PRDX5P30044 214 aa20.8■□□□□ 0.92
CLK3-210ENST00000563112 INHBEP58166 350 aa20.8■□□□□ 0.92
CLK3-210ENST00000563112 ATP8B2P98198 1209 aa20.8■□□□□ 0.92
CLK3-210ENST00000563112 WNK4Q96J92 1243 aa20.8■□□□□ 0.92
CLK3-210ENST00000563112 PDS5AQ29RF7 1337 aaKnown RBP20.79■□□□□ 0.92
CLK3-210ENST00000563112 OS9Q13438 667 aaPredicted RBP20.79■□□□□ 0.92
CLK3-210ENST00000563112 DGKZQ13574 1117 aa20.79■□□□□ 0.92
CLK3-210ENST00000563112 DIXDC1Q155Q3 683 aa20.79■□□□□ 0.92
CLK3-210ENST00000563112 SPTY2D1Q68D10 685 aaPredicted RBP20.79■□□□□ 0.92
CLK3-210ENST00000563112 DAGLAQ9Y4D2 1042 aa20.79■□□□□ 0.92
CLK3-210ENST00000563112 ZBTB7BO15156 539 aaPredicted RBP20.78■□□□□ 0.92
CLK3-210ENST00000563112 ALDH1A1P00352 501 aa20.78■□□□□ 0.92
CLK3-210ENST00000563112 MAP3K9P80192 1104 aa20.78■□□□□ 0.92
CLK3-210ENST00000563112 RASGRF1Q13972 1273 aa20.78■□□□□ 0.92
CLK3-210ENST00000563112 POLA2Q14181 598 aa20.78■□□□□ 0.92
CLK3-210ENST00000563112 SLF2Q8IX21 1173 aa20.78■□□□□ 0.92
CLK3-210ENST00000563112 SSH3Q8TE77 659 aa20.78■□□□□ 0.92
CLK3-210ENST00000563112 ABCF2Q9UG63 623 aa20.78■□□□□ 0.92
CLK3-210ENST00000563112 TBC1D8O95759 1140 aa20.77■□□□□ 0.92
CLK3-210ENST00000563112 RLBP1P12271 317 aa20.77■□□□□ 0.92
CLK3-210ENST00000563112 DZIP1Q86YF9 867 aaKnown RBP20.77■□□□□ 0.92
CLK3-210ENST00000563112 CDAN1Q8IWY9 1227 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms