RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PATL2C9JE40 543 aaKnown RBP11.13□□□□□ -0.63
LINC00838-201ENST00000562956 PRKAB2O43741 272 aa11.13□□□□□ -0.63
LINC00838-201ENST00000562956 PRPF40AO75400 957 aaKnown RBP11.13□□□□□ -0.63
LINC00838-201ENST00000562956 HIBADHP31937 336 aaKnown RBP11.13□□□□□ -0.63
LINC00838-201ENST00000562956 SKOR2Q2VWA4 1001 aaPredicted RBP11.13□□□□□ -0.63
LINC00838-201ENST00000562956 TBC1D10CQ8IV04 446 aa11.13□□□□□ -0.63
LINC00838-201ENST00000562956 MB21D2Q8IYB1 491 aaPredicted RBP11.13□□□□□ -0.63
LINC00838-201ENST00000562956 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
LINC00838-201ENST00000562956 RAI14Q9P0K7 980 aa11.13□□□□□ -0.63
LINC00838-201ENST00000562956 ANKIB1Q9P2G1 1089 aa11.13□□□□□ -0.63
LINC00838-201ENST00000562956 IRS2Q9Y4H2 1338 aa11.13□□□□□ -0.63
LINC00838-201ENST00000562956 GSG1L2A8MUP6 293 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 CYP7A1P22680 504 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 SCRN1Q12765 414 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 IFNL3Q8IZI9 196 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 NKX2-3Q8TAU0 364 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 JAK2O60674 1132 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 ANTXR2P58335 489 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 ALX1Q15699 326 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 COL23A1Q86Y22 540 aaPredicted RBP11.12□□□□□ -0.63
LINC00838-201ENST00000562956 NCOA7Q8NI08 942 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 MTMR6Q9Y217 621 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 SEMA3EO15041 775 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 PRC1O43663 620 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 PFKFB2O60825 505 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 PNPLA7Q6ZV29 1317 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 ZNF384Q8TF68 577 aa11.12□□□□□ -0.63
LINC00838-201ENST00000562956 RGS17Q9UGC6 210 aaPredicted RBP11.12□□□□□ -0.63
LINC00838-201ENST00000562956 DDX49Q9Y6V7 483 aaKnown RBP11.12□□□□□ -0.63
LINC00838-201ENST00000562956 F13A1P00488 732 aa11.11□□□□□ -0.63
LINC00838-201ENST00000562956 MCM5P33992 734 aa11.11□□□□□ -0.63
LINC00838-201ENST00000562956 LARP1BQ659C4 914 aaKnown RBP11.11□□□□□ -0.63
LINC00838-201ENST00000562956 FBXL16Q8N461 479 aa11.11□□□□□ -0.63
LINC00838-201ENST00000562956 NAPBQ9H115 298 aa11.11□□□□□ -0.63
LINC00838-201ENST00000562956 SLC4A4Q9Y6R1 1079 aa11.11□□□□□ -0.63
LINC00838-201ENST00000562956 LAMA4Q16363 1823 aa11.11□□□□□ -0.63
LINC00838-201ENST00000562956 ZMYM6O95789 1325 aa11.11□□□□□ -0.63
LINC00838-201ENST00000562956 KLHL40Q2TBA0 621 aa11.11□□□□□ -0.63
LINC00838-201ENST00000562956 RALYLQ86SE5 291 aaKnown RBP11.11□□□□□ -0.63
LINC00838-201ENST00000562956 INCENPQ9NQS7 918 aa11.11□□□□□ -0.63
LINC00838-201ENST00000562956 JAG2Q9Y219 1238 aa11.11□□□□□ -0.63
LINC00838-201ENST00000562956 XDHP47989 1333 aa11.1□□□□□ -0.63
LINC00838-201ENST00000562956 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
LINC00838-201ENST00000562956 GNAT2P19087 354 aa11.1□□□□□ -0.63
LINC00838-201ENST00000562956 PDIA3P30101 505 aaKnown RBP11.1□□□□□ -0.63
LINC00838-201ENST00000562956 GPSM2P81274 684 aa11.1□□□□□ -0.63
LINC00838-201ENST00000562956 CHAF1AQ13111 956 aaPredicted RBP11.1□□□□□ -0.63
LINC00838-201ENST00000562956 RBM17Q96I25 401 aaKnown RBP11.1□□□□□ -0.63
LINC00838-201ENST00000562956 GPR101Q96P66 508 aaPredicted RBP11.1□□□□□ -0.63
LINC00838-201ENST00000562956 NCOA5Q9HCD5 579 aaKnown RBP11.1□□□□□ -0.63
LINC00838-201ENST00000562956 NAP1L2Q9ULW6 460 aaPredicted RBP11.1□□□□□ -0.63
LINC00838-201ENST00000562956 LEMD3Q9Y2U8 911 aa11.1□□□□□ -0.63
LINC00838-201ENST00000562956 HMGB2P26583 209 aaKnown RBP11.1□□□□□ -0.63
LINC00838-201ENST00000562956 CCT2P78371 535 aaKnown RBP11.1□□□□□ -0.63
LINC00838-201ENST00000562956 HSP90AA2PQ14568 343 aaPredicted RBP11.1□□□□□ -0.63
LINC00838-201ENST00000562956 GPT2Q8TD30 523 aa11.1□□□□□ -0.63
LINC00838-201ENST00000562956 GDPD2Q9HCC8 539 aa11.1□□□□□ -0.63
LINC00838-201ENST00000562956 TACC3Q9Y6A5 838 aa11.1□□□□□ -0.63
LINC00838-201ENST00000562956 NEDD4P46934 1319 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
LINC00838-201ENST00000562956 MAGEB6P1A0A0J9YX57 407 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 CTDNEP1O95476 244 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 EVCP57679 992 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 CTDSPL2Q05D32 466 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 TRDNQ13061 729 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 NAA16Q6N069 864 aaPredicted RBP11.09□□□□□ -0.63
LINC00838-201ENST00000562956 CYB5R4Q7L1T6 521 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 CDC37L1Q7L3B6 337 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 ZNF274Q96GC6 653 aaPredicted RBP11.09□□□□□ -0.63
LINC00838-201ENST00000562956 RIOK1Q9BRS2 568 aaKnown RBP11.09□□□□□ -0.63
LINC00838-201ENST00000562956 KLRG2A4D1S0 409 aaPredicted RBP11.09□□□□□ -0.63
LINC00838-201ENST00000562956 PRDX5P30044 214 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 HOXA10P31260 410 aaPredicted RBP11.09□□□□□ -0.63
LINC00838-201ENST00000562956 TDO2P48775 406 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 MECOMQ03112 1051 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 POTEAQ6S8J7 498 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 NSUN7Q8NE18 718 aaKnown RBP11.09□□□□□ -0.63
LINC00838-201ENST00000562956 SDR42E1Q8WUS8 393 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 NSUN4Q96CB9 384 aaKnown RBP11.09□□□□□ -0.63
LINC00838-201ENST00000562956 DDX11Q96FC9 970 aa11.09□□□□□ -0.63
LINC00838-201ENST00000562956 NSFL1CQ9UNZ2 370 aaKnown RBP11.09□□□□□ -0.63
LINC00838-201ENST00000562956 B4E1Z4 1266 aa11.08□□□□□ -0.63
LINC00838-201ENST00000562956 PDCP20941 246 aa11.08□□□□□ -0.63
LINC00838-201ENST00000562956 DYNLL1P63167 89 aaKnown RBP11.08□□□□□ -0.63
LINC00838-201ENST00000562956 NLGN1Q8N2Q7 840 aa11.08□□□□□ -0.63
LINC00838-201ENST00000562956 SMARCC2Q8TAQ2 1214 aa11.08□□□□□ -0.63
LINC00838-201ENST00000562956 PANK2Q9BZ23 570 aa11.08□□□□□ -0.63
LINC00838-201ENST00000562956 NACAP1Q9BZK3 213 aa11.08□□□□□ -0.63
LINC00838-201ENST00000562956 CNPY2Q9Y2B0 182 aa11.08□□□□□ -0.63
LINC00838-201ENST00000562956 WDR19Q8NEZ3 1342 aa11.08□□□□□ -0.64
LINC00838-201ENST00000562956 NCLP19338 710 aaKnown RBP11.08□□□□□ -0.64
LINC00838-201ENST00000562956 LLPHQ9BRT6 129 aaKnown RBP11.08□□□□□ -0.64
LINC00838-201ENST00000562956 CACNA1SQ13698 1873 aa11.08□□□□□ -0.64
LINC00838-201ENST00000562956 PPFIA3O75145 1194 aa11.08□□□□□ -0.64
LINC00838-201ENST00000562956 BBOX1O75936 387 aa11.08□□□□□ -0.64
LINC00838-201ENST00000562956 USP48Q86UV5 1035 aa11.08□□□□□ -0.64
LINC00838-201ENST00000562956 KLF18A0A0U1RQI7 1052 aa11.07□□□□□ -0.64
LINC00838-201ENST00000562956 PTPDC1A2A3K4 754 aa11.07□□□□□ -0.64
LINC00838-201ENST00000562956 UFL1O94874 794 aa11.07□□□□□ -0.64
LINC00838-201ENST00000562956 FERMT3Q86UX7 667 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms