RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 EFCC1Q9HA90 598 aa20.89■□□□□ 0.93
CMTM3-205ENST00000562707 PTPN22Q9Y2R2 807 aa20.89■□□□□ 0.93
CMTM3-205ENST00000562707 MAP3K9P80192 1104 aa20.88■□□□□ 0.93
CMTM3-205ENST00000562707 FBXO33Q7Z6M2 555 aa20.88■□□□□ 0.93
CMTM3-205ENST00000562707 TBC1D22AQ8WUA7 517 aa20.88■□□□□ 0.93
CMTM3-205ENST00000562707 CSADQ9Y600 493 aa20.88■□□□□ 0.93
CMTM3-205ENST00000562707 PDE4DIPQ5VU43 2346 aa20.87■□□□□ 0.93
CMTM3-205ENST00000562707 HDLBPQ00341 1268 aaKnown RBP20.87■□□□□ 0.93
CMTM3-205ENST00000562707 CHAF1AQ13111 956 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-205ENST00000562707 ARHGEF6Q15052 776 aa20.87■□□□□ 0.93
CMTM3-205ENST00000562707 METTL24Q5JXM2 366 aa20.87■□□□□ 0.93
CMTM3-205ENST00000562707 TEPSINQ96N21 525 aa20.87■□□□□ 0.93
CMTM3-205ENST00000562707 TMEM39BQ9GZU3 492 aa20.87■□□□□ 0.93
CMTM3-205ENST00000562707 BICC1Q9H694 974 aaKnown RBP20.87■□□□□ 0.93
CMTM3-205ENST00000562707 IQSEC3Q9UPP2 1182 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-205ENST00000562707 UTYO14607 1347 aa20.86■□□□□ 0.93
CMTM3-205ENST00000562707 GTF2A2P52657 109 aa20.86■□□□□ 0.93
CMTM3-205ENST00000562707 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-205ENST00000562707 MS4A4AQ96JQ5 239 aa20.86■□□□□ 0.93
CMTM3-205ENST00000562707 RABL6Q3YEC7 729 aaPredicted RBP20.85■□□□□ 0.93
CMTM3-205ENST00000562707 LRRC24Q50LG9 513 aa20.85■□□□□ 0.93
CMTM3-205ENST00000562707 CDAN1Q8IWY9 1227 aa20.85■□□□□ 0.93
CMTM3-205ENST00000562707 TEKT1Q969V4 418 aa20.85■□□□□ 0.93
CMTM3-205ENST00000562707 ZFYVE28Q9HCC9 887 aa20.85■□□□□ 0.93
CMTM3-205ENST00000562707 CACNA1FO60840 1977 aa20.85■□□□□ 0.93
CMTM3-205ENST00000562707 CCL15-CCL14A0A0B4J2E2 113 aa20.84■□□□□ 0.93
CMTM3-205ENST00000562707 POTEFA5A3E0 1075 aa20.84■□□□□ 0.93
CMTM3-205ENST00000562707 WDHD1O75717 1129 aaPredicted RBP20.84■□□□□ 0.93
CMTM3-205ENST00000562707 PDE8BO95263 885 aa20.84■□□□□ 0.93
CMTM3-205ENST00000562707 VGLL4Q14135 290 aa20.84■□□□□ 0.93
CMTM3-205ENST00000562707 TAF1CQ15572 869 aaPredicted RBP20.84■□□□□ 0.93
CMTM3-205ENST00000562707 GRIK5Q16478 980 aa20.84■□□□□ 0.93
CMTM3-205ENST00000562707 CCL15Q16663 113 aa20.84■□□□□ 0.93
CMTM3-205ENST00000562707 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.84■□□□□ 0.93
CMTM3-205ENST00000562707 BRI3BPQ8WY22 251 aa20.84■□□□□ 0.93
CMTM3-205ENST00000562707 GCC1Q96CN9 775 aa20.84■□□□□ 0.93
CMTM3-205ENST00000562707 TMOD2Q9NZR1 351 aa20.84■□□□□ 0.93
CMTM3-205ENST00000562707 CNKSR2Q8WXI2 1034 aa20.83■□□□□ 0.93
CMTM3-205ENST00000562707 HOOK2Q96ED9 719 aa20.83■□□□□ 0.93
CMTM3-205ENST00000562707 OTUD5Q96G74 571 aa20.83■□□□□ 0.93
CMTM3-205ENST00000562707 MRIQ9BWK5 157 aa20.83■□□□□ 0.93
CMTM3-205ENST00000562707 MRPL50Q8N5N7 158 aaKnown RBP20.82■□□□□ 0.92
CMTM3-205ENST00000562707 ANKRD44Q8N8A2 993 aa20.82■□□□□ 0.92
CMTM3-205ENST00000562707 ARMC5Q96C12 935 aa20.82■□□□□ 0.92
CMTM3-205ENST00000562707 IFIT1P09914 478 aaKnown RBP20.81■□□□□ 0.92
CMTM3-205ENST00000562707 BCAMP50895 628 aa20.81■□□□□ 0.92
CMTM3-205ENST00000562707 CACNB3P54284 484 aa20.81■□□□□ 0.92
CMTM3-205ENST00000562707 ZDHHC15Q96MV8 337 aa20.81■□□□□ 0.92
CMTM3-205ENST00000562707 TMEM106CQ9BVX2 250 aa20.81■□□□□ 0.92
CMTM3-205ENST00000562707 SUGT1Q9Y2Z0 365 aa20.81■□□□□ 0.92
CMTM3-205ENST00000562707 MAST3O60307 1309 aa20.8■□□□□ 0.92
CMTM3-205ENST00000562707 PTPRCP08575 1304 aa20.8■□□□□ 0.92
CMTM3-205ENST00000562707 ZNF316A6NFI3 1004 aaPredicted RBP20.8■□□□□ 0.92
CMTM3-205ENST00000562707 SPDYE5A6NIY4 337 aa20.8■□□□□ 0.92
CMTM3-205ENST00000562707 NBPF11Q86T75 865 aa20.8■□□□□ 0.92
CMTM3-205ENST00000562707 FAM83AQ86UY5 434 aa20.8■□□□□ 0.92
CMTM3-205ENST00000562707 VGLL2Q8N8G2 317 aa20.8■□□□□ 0.92
CMTM3-205ENST00000562707 ECM29Q5VYK3 1845 aa20.79■□□□□ 0.92
CMTM3-205ENST00000562707 CETPP11597 493 aa20.79■□□□□ 0.92
CMTM3-205ENST00000562707 PUM3Q15397 648 aaKnown RBP20.79■□□□□ 0.92
CMTM3-205ENST00000562707 FKBP1CQ5VVH2 108 aa20.79■□□□□ 0.92
CMTM3-205ENST00000562707 ERO1BQ86YB8 467 aa20.79■□□□□ 0.92
CMTM3-205ENST00000562707 FAM43AQ8N2R8 423 aa20.79■□□□□ 0.92
CMTM3-205ENST00000562707 KLHDC4Q8TBB5 520 aa20.79■□□□□ 0.92
CMTM3-205ENST00000562707 WRNIP1Q96S55 665 aa20.79■□□□□ 0.92
CMTM3-205ENST00000562707 A0A1B0GUL6 1792 aa20.79■□□□□ 0.92
CMTM3-205ENST00000562707 DCAF15Q66K64 600 aa20.78■□□□□ 0.92
CMTM3-205ENST00000562707 EN2P19622 333 aaPredicted RBP20.77■□□□□ 0.92
CMTM3-205ENST00000562707 ZEB1P37275 1124 aaPredicted RBP20.77■□□□□ 0.92
CMTM3-205ENST00000562707 CAP1Q01518 475 aa20.77■□□□□ 0.92
CMTM3-205ENST00000562707 SNAPC2Q13487 334 aa20.77■□□□□ 0.92
CMTM3-205ENST00000562707 KIF22Q14807 665 aa20.77■□□□□ 0.92
CMTM3-205ENST00000562707 SLC9C1Q4G0N8 1177 aa20.77■□□□□ 0.92
CMTM3-205ENST00000562707 APOBEC3HQ6NTF7 200 aaKnown RBP20.77■□□□□ 0.92
CMTM3-205ENST00000562707 HHIPL2Q6UWX4 724 aa20.77■□□□□ 0.92
CMTM3-205ENST00000562707 USP44Q9H0E7 712 aa20.77■□□□□ 0.92
CMTM3-205ENST00000562707 ZCCHC17Q9NP64 241 aaKnown RBP20.77■□□□□ 0.92
CMTM3-205ENST00000562707 SNCAIPQ9Y6H5 919 aa20.77■□□□□ 0.92
CMTM3-205ENST00000562707 KIF16BQ96L93 1317 aa20.77■□□□□ 0.91
CMTM3-205ENST00000562707 SLC5A1P13866 664 aa20.76■□□□□ 0.91
CMTM3-205ENST00000562707 FGFR2P21802 821 aa20.76■□□□□ 0.91
CMTM3-205ENST00000562707 WDR66Q8TBY9 1149 aa20.76■□□□□ 0.91
CMTM3-205ENST00000562707 ZKSCAN4Q969J2 545 aaPredicted RBP20.76■□□□□ 0.91
CMTM3-205ENST00000562707 ZNF521Q96K83 1311 aa20.76■□□□□ 0.91
CMTM3-205ENST00000562707 EYA2O00167 538 aa20.75■□□□□ 0.91
CMTM3-205ENST00000562707 TLR2O60603 784 aa20.75■□□□□ 0.91
CMTM3-205ENST00000562707 ZNF333Q96JL9 665 aa20.75■□□□□ 0.91
CMTM3-205ENST00000562707 ZNF341Q9BYN7 854 aa20.75■□□□□ 0.91
CMTM3-205ENST00000562707 PTCH2Q9Y6C5 1203 aa20.75■□□□□ 0.91
CMTM3-205ENST00000562707 BTBD19C9JJ37 291 aa20.74■□□□□ 0.91
CMTM3-205ENST00000562707 E9PSI1 815 aa20.74■□□□□ 0.91
CMTM3-205ENST00000562707 IRF6O14896 467 aa20.74■□□□□ 0.91
CMTM3-205ENST00000562707 PPIL2Q13356 520 aa20.74■□□□□ 0.91
CMTM3-205ENST00000562707 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
CMTM3-205ENST00000562707 SSH1Q8WYL5 1049 aa20.74■□□□□ 0.91
CMTM3-205ENST00000562707 LPIN2Q92539 896 aa20.74■□□□□ 0.91
CMTM3-205ENST00000562707 MIGA2Q7L4E1 593 aa20.73■□□□□ 0.91
CMTM3-205ENST00000562707 PPATQ06203 517 aa20.72■□□□□ 0.91
CMTM3-205ENST00000562707 FAM151AQ8WW52 585 aa20.72■□□□□ 0.91
CMTM3-205ENST00000562707 GNRH1P01148 92 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms