RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 CTCFP49711 727 aaPredicted RBP13.79□□□□□ -0.2
LPCAT4-202ENST00000562404 IFFO2Q5TF58 517 aa13.79□□□□□ -0.2
LPCAT4-202ENST00000562404 RASAL3Q86YV0 1011 aa13.79□□□□□ -0.2
LPCAT4-202ENST00000562404 ITPRIPQ8IWB1 547 aa13.79□□□□□ -0.2
LPCAT4-202ENST00000562404 VEZTQ9HBM0 779 aa13.79□□□□□ -0.2
LPCAT4-202ENST00000562404 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
LPCAT4-202ENST00000562404 MYO5AQ9Y4I1 1855 aaKnown RBP13.78□□□□□ -0.2
LPCAT4-202ENST00000562404 KIF23Q02241 960 aaPredicted RBP13.78□□□□□ -0.2
LPCAT4-202ENST00000562404 NOGQ13253 232 aa13.78□□□□□ -0.2
LPCAT4-202ENST00000562404 POLA2Q14181 598 aa13.78□□□□□ -0.2
LPCAT4-202ENST00000562404 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
LPCAT4-202ENST00000562404 NBPF12Q5TAG4 269 aaPredicted RBP13.78□□□□□ -0.2
LPCAT4-202ENST00000562404 TBC1D22AQ8WUA7 517 aa13.78□□□□□ -0.2
LPCAT4-202ENST00000562404 AIDAQ96BJ3 306 aa13.78□□□□□ -0.2
LPCAT4-202ENST00000562404 ZNF70Q9UC06 446 aaPredicted RBP13.78□□□□□ -0.2
LPCAT4-202ENST00000562404 A0A1B0GUL7 405 aa13.77□□□□□ -0.21
LPCAT4-202ENST00000562404 PRDX5P30044 214 aa13.77□□□□□ -0.21
LPCAT4-202ENST00000562404 CACNB3P54284 484 aa13.77□□□□□ -0.21
LPCAT4-202ENST00000562404 FKBP1BP68106 108 aa13.77□□□□□ -0.21
LPCAT4-202ENST00000562404 RASA3Q14644 834 aa13.77□□□□□ -0.21
LPCAT4-202ENST00000562404 CCDC102BQ68D86 513 aa13.77□□□□□ -0.21
LPCAT4-202ENST00000562404 FTSJ3Q8IY81 847 aaKnown RBP13.77□□□□□ -0.21
LPCAT4-202ENST00000562404 LAMB1P07942 1786 aa13.76□□□□□ -0.21
LPCAT4-202ENST00000562404 ATP8B2P98198 1209 aa13.76□□□□□ -0.21
LPCAT4-202ENST00000562404 TTLL12Q14166 644 aaPredicted RBP13.76□□□□□ -0.21
LPCAT4-202ENST00000562404 APOBEC3HQ6NTF7 200 aaKnown RBP13.76□□□□□ -0.21
LPCAT4-202ENST00000562404 SSH3Q8TE77 659 aa13.76□□□□□ -0.21
LPCAT4-202ENST00000562404 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
LPCAT4-202ENST00000562404 XAGE2Q96GT9 111 aa13.76□□□□□ -0.21
LPCAT4-202ENST00000562404 TEPSINQ96N21 525 aa13.76□□□□□ -0.21
LPCAT4-202ENST00000562404 CSRNP1Q96S65 589 aa13.76□□□□□ -0.21
LPCAT4-202ENST00000562404 PRDM10Q9NQV6 1147 aa13.76□□□□□ -0.21
LPCAT4-202ENST00000562404 TCP10L2B9ZVM9 353 aa13.75□□□□□ -0.21
LPCAT4-202ENST00000562404 MYO1BO43795 1136 aa13.75□□□□□ -0.21
LPCAT4-202ENST00000562404 HDLBPQ00341 1268 aaKnown RBP13.75□□□□□ -0.21
LPCAT4-202ENST00000562404 RASGRF1Q13972 1273 aa13.75□□□□□ -0.21
LPCAT4-202ENST00000562404 DIXDC1Q155Q3 683 aa13.75□□□□□ -0.21
LPCAT4-202ENST00000562404 LDLRAD1Q5T700 205 aa13.75□□□□□ -0.21
LPCAT4-202ENST00000562404 TNS4Q8IZW8 715 aa13.75□□□□□ -0.21
LPCAT4-202ENST00000562404 ZDHHC15Q96MV8 337 aa13.75□□□□□ -0.21
LPCAT4-202ENST00000562404 TMEM39BQ9GZU3 492 aa13.75□□□□□ -0.21
LPCAT4-202ENST00000562404 ANGEL1Q9UNK9 670 aaKnown RBP13.75□□□□□ -0.21
LPCAT4-202ENST00000562404 AK9Q5TCS8 1911 aa13.74□□□□□ -0.21
LPCAT4-202ENST00000562404 NF2P35240 595 aa13.74□□□□□ -0.21
LPCAT4-202ENST00000562404 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
LPCAT4-202ENST00000562404 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
LPCAT4-202ENST00000562404 WDR66Q8TBY9 1149 aa13.74□□□□□ -0.21
LPCAT4-202ENST00000562404 TEKT1Q969V4 418 aa13.74□□□□□ -0.21
LPCAT4-202ENST00000562404 CLMNQ96JQ2 1002 aa13.74□□□□□ -0.21
LPCAT4-202ENST00000562404 MRIQ9BWK5 157 aa13.74□□□□□ -0.21
LPCAT4-202ENST00000562404 SUGT1Q9Y2Z0 365 aa13.74□□□□□ -0.21
LPCAT4-202ENST00000562404 PPP2R3BQ9Y5P8 575 aa13.74□□□□□ -0.21
LPCAT4-202ENST00000562404 SALL1Q9NSC2 1324 aa13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 ZBTB22O15209 634 aa13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 USP2O75604 605 aaPredicted RBP13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 G3BP1Q13283 466 aaKnown RBP eCLIP13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 MAP3K11Q16584 847 aa13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 CEP85Q6P2H3 762 aa13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 NEUROD6Q96NK8 337 aa13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 BEGAINQ9BUH8 593 aa13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 RCAN3Q9UKA8 241 aa13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 DENND2AQ9ULE3 1009 aa13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 DAGLAQ9Y4D2 1042 aa13.73□□□□□ -0.21
LPCAT4-202ENST00000562404 C20orf194Q5TEA3 1177 aa13.72□□□□□ -0.21
LPCAT4-202ENST00000562404 HHIPL2Q6UWX4 724 aa13.72□□□□□ -0.21
LPCAT4-202ENST00000562404 ARMC9Q7Z3E5 817 aa13.72□□□□□ -0.21
LPCAT4-202ENST00000562404 ZNF384Q8TF68 577 aa13.72□□□□□ -0.21
LPCAT4-202ENST00000562404 GNL3LQ9NVN8 582 aaKnown RBP13.72□□□□□ -0.21
LPCAT4-202ENST00000562404 RNF186Q9NXI6 227 aa13.72□□□□□ -0.21
LPCAT4-202ENST00000562404 AKAP2Q9Y2D5 859 aa13.72□□□□□ -0.21
LPCAT4-202ENST00000562404 COG6Q9Y2V7 657 aa13.72□□□□□ -0.21
LPCAT4-202ENST00000562404 MAST3O60307 1309 aa13.71□□□□□ -0.21
LPCAT4-202ENST00000562404 SEMA3EO15041 775 aa13.71□□□□□ -0.21
LPCAT4-202ENST00000562404 SURF6O75683 361 aaKnown RBP13.71□□□□□ -0.21
LPCAT4-202ENST00000562404 TRPA1O75762 1119 aa13.71□□□□□ -0.21
LPCAT4-202ENST00000562404 LDHBP07195 334 aaKnown RBP13.71□□□□□ -0.21
LPCAT4-202ENST00000562404 HMG20BQ9P0W2 317 aa13.71□□□□□ -0.21
LPCAT4-202ENST00000562404 NOP58Q9Y2X3 529 aaKnown RBP13.71□□□□□ -0.21
LPCAT4-202ENST00000562404 ARID4AP29374 1257 aaPredicted RBP13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 GJA5P36382 358 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 MCAMP43121 646 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 NFIAQ12857 509 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 TNFAIP1Q13829 316 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 MVPQ14764 893 aaKnown RBP13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 SUPT20HL1Q3ZLR7 823 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 TNNI3KQ59H18 835 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 CDC42EP5Q6NZY7 148 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 TBC1D9Q6ZT07 1266 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 DBNDD2Q9BQY9 259 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 FPGT-TNNI3KV9GXZ4 949 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 CDK5RAP2Q96SN8 1893 aa13.7□□□□□ -0.22
LPCAT4-202ENST00000562404 PDS5AQ29RF7 1337 aaKnown RBP13.69□□□□□ -0.22
LPCAT4-202ENST00000562404 CA12O43570 354 aa13.69□□□□□ -0.22
LPCAT4-202ENST00000562404 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
LPCAT4-202ENST00000562404 SPRYD7Q5W111 196 aa13.69□□□□□ -0.22
LPCAT4-202ENST00000562404 ZFPM1Q8IX07 1006 aa13.69□□□□□ -0.22
LPCAT4-202ENST00000562404 SIRT2Q8IXJ6 389 aa13.69□□□□□ -0.22
LPCAT4-202ENST00000562404 TLR7Q9NYK1 1049 aaKnown RBP13.69□□□□□ -0.22
LPCAT4-202ENST00000562404 ABCF2Q9UG63 623 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms