RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MAGEB6P1A0A0J9YX57 407 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 M0R2C6 588 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 GPAA1O43292 621 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 ST18O60284 1047 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 APPP05067 770 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 HSPD1P10809 573 aaKnown RBP12.31□□□□□ -0.44
USP3-219ENST00000561326 KRT32Q14532 448 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 SLFNL1Q499Z3 407 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 TTLL5Q6EMB2 1281 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 SLC51AQ86UW1 340 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 PSMD1Q99460 953 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 SUGT1Q9Y2Z0 365 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
USP3-219ENST00000561326 PATL2C9JE40 543 aaKnown RBP12.3□□□□□ -0.44
USP3-219ENST00000561326 CHGBP05060 677 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 PSMA5P28066 241 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 GTF2IP78347 998 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 MECOMQ03112 1051 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 CREB3L3Q68CJ9 461 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 KCNB2Q92953 911 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 NSUN4Q96CB9 384 aaKnown RBP12.3□□□□□ -0.44
USP3-219ENST00000561326 IL17RAQ96F46 866 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 STRBPQ96SI9 672 aaKnown RBP12.3□□□□□ -0.44
USP3-219ENST00000561326 KIF2CQ99661 725 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 NACAP1Q9BZK3 213 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 MAST2Q6P0Q8 1798 aa12.3□□□□□ -0.44
USP3-219ENST00000561326 RPAP1Q9BWH6 1393 aaPredicted RBP12.3□□□□□ -0.44
USP3-219ENST00000561326 FER1L6Q2WGJ9 1857 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 COL1A1P02452 1464 aaPredicted RBP12.29□□□□□ -0.44
USP3-219ENST00000561326 PPIP5K2O43314 1243 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 BAG3O95817 575 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 KIAA2012Q0VF49 1180 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 ALX1Q15699 326 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 IMMTQ16891 758 aaKnown RBP12.29□□□□□ -0.44
USP3-219ENST00000561326 TSGA10IPQ3SY00 556 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 MFSD14BQ5SR56 506 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 HSCBQ8IWL3 235 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 FBXW7Q969H0 707 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 SNX21Q969T3 373 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 TM6SF1Q9BZW5 370 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 SNX14Q9Y5W7 946 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 ARFGEF1Q9Y6D6 1849 aa12.29□□□□□ -0.44
USP3-219ENST00000561326 SLC27A2O14975 620 aa12.28□□□□□ -0.44
USP3-219ENST00000561326 MBD4O95243 580 aa12.28□□□□□ -0.44
USP3-219ENST00000561326 PRDX5P30044 214 aa12.28□□□□□ -0.44
USP3-219ENST00000561326 MCM2P49736 904 aa12.28□□□□□ -0.44
USP3-219ENST00000561326 NEK4P51957 841 aa12.28□□□□□ -0.44
USP3-219ENST00000561326 FKBP1AP62942 108 aaKnown RBP12.28□□□□□ -0.44
USP3-219ENST00000561326 STRIP1Q5VSL9 837 aa12.28□□□□□ -0.44
USP3-219ENST00000561326 JAG2Q9Y219 1238 aa12.28□□□□□ -0.44
USP3-219ENST00000561326 PSME4Q14997 1843 aa12.27□□□□□ -0.44
USP3-219ENST00000561326 USP17L3A6NCW0 530 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 USP17L4A6NCW7 530 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 ZNF213O14771 459 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 ECE2O60344 883 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 FGAP02671 866 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 HMGB1P09429 215 aaKnown RBP12.27□□□□□ -0.45
USP3-219ENST00000561326 PLCG2P16885 1265 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 AOC3Q16853 763 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 VPS53Q5VIR6 699 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 USP17L1Q7RTZ2 530 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 LARGE2Q8N3Y3 721 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
USP3-219ENST00000561326 CRNKL1Q9BZJ0 848 aaKnown RBP12.27□□□□□ -0.45
USP3-219ENST00000561326 ARMT1Q9H993 441 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 DBNDD1Q9H9R9 158 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 PALD1Q9ULE6 856 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 CYP46A1Q9Y6A2 500 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 SLC4A4Q9Y6R1 1079 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 LAMA4Q16363 1823 aa12.27□□□□□ -0.45
USP3-219ENST00000561326 BAZ2AQ9UIF9 1905 aaKnown RBP12.27□□□□□ -0.45
USP3-219ENST00000561326 GIMAP6Q6P9H5 292 aa12.26□□□□□ -0.45
USP3-219ENST00000561326 RASEFQ8IZ41 740 aa12.26□□□□□ -0.45
USP3-219ENST00000561326 IFNL3Q8IZI9 196 aa12.26□□□□□ -0.45
USP3-219ENST00000561326 JAKMIP1Q96N16 626 aaKnown RBP12.26□□□□□ -0.45
USP3-219ENST00000561326 NAPBQ9H115 298 aa12.26□□□□□ -0.45
USP3-219ENST00000561326 SCN9AQ15858 1988 aa12.26□□□□□ -0.45
USP3-219ENST00000561326 GSG1L2A8MUP6 293 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 CASTP20810 708 aaKnown RBP12.25□□□□□ -0.45
USP3-219ENST00000561326 TDO2P48775 406 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 PPP4CP60510 307 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 BLOC1S2Q6QNY1 142 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 RUFY3Q7L099 469 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 NIM1KQ8IY84 436 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 JDP2Q8WYK2 163 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 MRIQ9BWK5 157 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 TBC1D2Q9BYX2 928 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 TAOK3Q9H2K8 898 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 ZSWIM6Q9HCJ5 1215 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 ZMYM6O95789 1325 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 SNED1Q8TER0 1413 aa12.25□□□□□ -0.45
USP3-219ENST00000561326 MROH7-TTC4A0A0A0MT08 1334 aa12.24□□□□□ -0.45
USP3-219ENST00000561326 CYP21A2P08686 494 aa12.24□□□□□ -0.45
USP3-219ENST00000561326 IARSP41252 1262 aaKnown RBP12.24□□□□□ -0.45
USP3-219ENST00000561326 TRDNQ13061 729 aa12.24□□□□□ -0.45
USP3-219ENST00000561326 ADGRA1Q86SQ6 560 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms