RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 NBPF12Q5TAG4 269 aaPredicted RBP12.76□□□□□ -0.37
SNRPA1-212ENST00000560496 CTU1Q7Z7A3 348 aaKnown RBP12.76□□□□□ -0.37
SNRPA1-212ENST00000560496 ZNF296Q8WUU4 475 aaPredicted RBP12.76□□□□□ -0.37
SNRPA1-212ENST00000560496 WNK4Q96J92 1243 aa12.76□□□□□ -0.37
SNRPA1-212ENST00000560496 IQSEC3Q9UPP2 1182 aaPredicted RBP12.76□□□□□ -0.37
SNRPA1-212ENST00000560496 ZBTB48P10074 688 aaPredicted RBP12.75□□□□□ -0.37
SNRPA1-212ENST00000560496 CRKP46108 304 aa12.75□□□□□ -0.37
SNRPA1-212ENST00000560496 RASA3Q14644 834 aa12.75□□□□□ -0.37
SNRPA1-212ENST00000560496 TEPSINQ96N21 525 aa12.75□□□□□ -0.37
SNRPA1-212ENST00000560496 R3HDMLQ9H3Y0 253 aa12.75□□□□□ -0.37
SNRPA1-212ENST00000560496 TDRD3Q9H7E2 651 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-212ENST00000560496 ZNF70Q9UC06 446 aaPredicted RBP12.75□□□□□ -0.37
SNRPA1-212ENST00000560496 MYH2Q9UKX2 1941 aa12.74□□□□□ -0.37
SNRPA1-212ENST00000560496 MAST2Q6P0Q8 1798 aa12.74□□□□□ -0.37
SNRPA1-212ENST00000560496 RPAP1Q9BWH6 1393 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-212ENST00000560496 GPR25O00155 361 aa12.74□□□□□ -0.37
SNRPA1-212ENST00000560496 IGF2BP3O00425 579 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNRPA1-212ENST00000560496 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.376e-6■□□□□ 9
SNRPA1-212ENST00000560496 CHAF1AQ13111 956 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-212ENST00000560496 PUM3Q15397 648 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-212ENST00000560496 DZIP1LQ8IYY4 767 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-212ENST00000560496 UNCXA6NJT0 531 aa12.73□□□□□ -0.37
SNRPA1-212ENST00000560496 PPP1R12BO60237 982 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-212ENST00000560496 USP2O75604 605 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-212ENST00000560496 BCAMP50895 628 aa12.73□□□□□ -0.37
SNRPA1-212ENST00000560496 MLLT1Q03111 559 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-212ENST00000560496 TNFAIP1Q13829 316 aa12.73□□□□□ -0.37
SNRPA1-212ENST00000560496 ATG9AQ7Z3C6 839 aa12.73□□□□□ -0.37
SNRPA1-212ENST00000560496 MANSC4A6NHS7 340 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 TCP10L2B9ZVM9 353 aa12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 EYA2O00167 538 aa12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 SOX10P56693 466 aa12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 SUPT20HL1Q3ZLR7 823 aa12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 CAVIN4Q5BKX8 364 aa12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 IFNL1Q8IU54 200 aa12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 TBC1D22AQ8WUA7 517 aa12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 TMEM39BQ9GZU3 492 aa12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 HPS5Q9UPZ3 1129 aa12.72□□□□□ -0.37
SNRPA1-212ENST00000560496 PTPRFP10586 1907 aa12.71□□□□□ -0.37
SNRPA1-212ENST00000560496 CCER2I3L3R5 266 aa12.71□□□□□ -0.37
SNRPA1-212ENST00000560496 UBTFL1P0CB47 393 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-212ENST00000560496 IREB2P48200 963 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-212ENST00000560496 CACNB3P54284 484 aa12.71□□□□□ -0.37
SNRPA1-212ENST00000560496 HDLBPQ00341 1268 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-212ENST00000560496 ANKRD13AQ8IZ07 590 aa12.71□□□□□ -0.37
SNRPA1-212ENST00000560496 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNRPA1-212ENST00000560496 DOCK1Q14185 1865 aa12.71□□□□□ -0.37
SNRPA1-212ENST00000560496 RFX7Q2KHR2 1363 aa12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 MAST3O60307 1309 aa12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 PHIPQ8WWQ0 1821 aa12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 DSG3P32926 999 aa12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 LPIN2Q92539 896 aa12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 TEKT1Q969V4 418 aa12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 SLC10A4Q96EP9 437 aa12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 ZDHHC15Q96MV8 337 aa12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 MEIS3Q99687 375 aa12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 SIL1Q9H173 461 aa12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 NOB1Q9ULX3 412 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 LRRFIP2Q9Y608 721 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-212ENST00000560496 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 FKTNO75072 461 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 FRAT2O75474 233 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 CIAO1O76071 339 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 ALDH1A1P00352 501 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 SLC5A1P13866 664 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 RARSP54136 660 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 VGLL4Q14135 290 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 PKN2Q16513 984 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 APOBEC3HQ6NTF7 200 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 OPTNQ96CV9 577 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 PTPN18Q99952 460 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 ELP3Q9H9T3 547 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 SUGT1Q9Y2Z0 365 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 CDK5RAP2Q96SN8 1893 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 ATAD5Q96QE3 1844 aa12.69□□□□□ -0.38
SNRPA1-212ENST00000560496 AK9Q5TCS8 1911 aa12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 FOCADQ5VW36 1801 aa12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 PRDX5P30044 214 aa12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 TNNI2P48788 182 aa12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 INHBEP58166 350 aa12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 CAP1Q01518 475 aa12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 ATP2B3Q16720 1220 aa12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 FBXO46Q6PJ61 603 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 API5Q9BZZ5 524 aaKnown RBP12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-212ENST00000560496 SIPA1L1O43166 1804 aa12.67□□□□□ -0.38
SNRPA1-212ENST00000560496 SALL1Q9NSC2 1324 aa12.67□□□□□ -0.38
SNRPA1-212ENST00000560496 ZBTB22O15209 634 aa12.67□□□□□ -0.38
SNRPA1-212ENST00000560496 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
SNRPA1-212ENST00000560496 CRHR2Q13324 411 aa12.67□□□□□ -0.38
SNRPA1-212ENST00000560496 FKBP1CQ5VVH2 108 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1213.4 ms