RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 PHACTR1Q9C0D0 580 aa5.53□□□□□ -1.52
HMGB3P26-201ENST00000560051 PCDH12Q9NPG4 1184 aa5.53□□□□□ -1.52
HMGB3P26-201ENST00000560051 MAP3K20Q9NYL2 800 aaKnown RBP5.53□□□□□ -1.52
HMGB3P26-201ENST00000560051 DMGDHQ9UI17 866 aaKnown RBP5.53□□□□□ -1.52
HMGB3P26-201ENST00000560051 PRDM4Q9UKN5 801 aa5.53□□□□□ -1.52
HMGB3P26-201ENST00000560051 ODF2LQ9ULJ1 636 aa5.53□□□□□ -1.52
HMGB3P26-201ENST00000560051 SLC6A14Q9UN76 642 aa5.53□□□□□ -1.52
HMGB3P26-201ENST00000560051 AKAP2Q9Y2D5 859 aa5.53□□□□□ -1.52
HMGB3P26-201ENST00000560051 EPHA4P54764 986 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 KIAA2012Q0VF49 1180 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 NEXNQ0ZGT2 675 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 VPS72Q15906 364 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 PSAPL1Q6NUJ1 521 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 NT5DC4Q86YG4 428 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 DMRTC2Q8IXT2 367 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 C7orf43Q8WVR3 580 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 SUSD3Q96L08 255 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 TTC14Q96N46 770 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 ZHX3Q9H4I2 956 aa5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 TYW1Q9NV66 732 aaKnown RBP5.52□□□□□ -1.53
HMGB3P26-201ENST00000560051 USP17L5A8MUK1 530 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 GOLGA6L6A8MZA4 724 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 PPP1R12BO60237 982 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 SCNN1AP37088 669 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 TYRO3Q06418 890 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 RBL2Q08999 1139 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 UBE4AQ14139 1066 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 DCTN1Q14203 1278 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 CCDC102BQ68D86 513 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 TTLL5Q6EMB2 1281 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 SHISA2Q6UWI4 295 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 ZSCAN30Q86W11 494 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 DEPDC4Q8N2C3 294 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 ATL2Q8NHH9 583 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 STAG1Q8WVM7 1258 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 C8orf48Q96LL4 319 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 CFAP53Q96M91 514 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 CEP89Q96ST8 783 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 SRRTQ9BXP5 876 aaKnown RBP5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 CAPN10Q9HC96 672 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 IFT57Q9NWB7 429 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 NOVA2Q9UNW9 492 aaKnown RBP5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 KAT6BQ8WYB5 2073 aa5.51□□□□□ -1.53
HMGB3P26-201ENST00000560051 VIL1P09327 827 aaKnown RBP5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 CT47B1P0C2W7 299 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 ATICP31939 592 aa5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 FLT3P36888 993 aa5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 CASP2P42575 452 aa5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 TNNT2P45379 298 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 HIRAP54198 1017 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 DHX8Q14562 1220 aaKnown RBP5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 CCDC92Q53HC0 331 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 SH3PXD2AQ5TCZ1 1133 aa5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 CCDC73Q6ZRK6 1079 aa5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 FMNL3Q8IVF7 1028 aa5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 FMR1NBQ8N0W7 255 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 DTWD1Q8N5C7 304 aa5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 PAF1Q8N7H5 531 aa5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 TSPAN10Q9H1Z9 355 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 RETREG1Q9H6L5 497 aa5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 CASS4Q9NQ75 786 aa5.5□□□□□ -1.53
HMGB3P26-201ENST00000560051 EPB42P16452 691 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 CASQ1P31415 396 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 AFF1P51825 1210 aaKnown RBP5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 SATB1Q01826 763 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 CCINQ13939 588 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 KCTD2Q14681 263 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 NFE2L2Q16236 605 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 BTLAQ7Z6A9 289 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 KRT77Q7Z794 578 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 FILIP1Q7Z7B0 1213 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 CATIPQ7Z7H3 387 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 PRPF38AQ8NAV1 312 aaKnown RBP5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 ZNF280CQ8ND82 737 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 VPS37AQ8NEZ2 397 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 FRMD6Q96NE9 622 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 DNAJB12Q9NXW2 375 aaKnown RBP5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 DDX56Q9NY93 547 aaKnown RBP5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 SFMBT1Q9UHJ3 866 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 RNF112Q9ULX5 631 aa5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 MRPL42Q9Y6G3 142 aaKnown RBP5.49□□□□□ -1.53
HMGB3P26-201ENST00000560051 M0R2N6 131 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 KIF3BO15066 747 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 PAX4O43316 350 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 ATP9BO43861 1147 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 ITGAEP38570 1179 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 EVA1CP58658 441 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 FAM69CQ0P6D2 419 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 MSL1Q68DK7 614 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 SLC51AQ86UW1 340 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 FAM35AQ86V20 835 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 LCA5Q86VQ0 697 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 LMNTD2Q8IXW0 634 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 ALDH16A1Q8IZ83 802 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 STK11IPQ8N1F8 1099 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 SAMD3Q8N6K7 520 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 WFDC12Q8WWY7 111 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 IL17RAQ96F46 866 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms