RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 SPATA31C2B4DYI2 1134 aa10.75□□□□□ -0.69
SCG3-203ENST00000558709 RFC4P35249 363 aa10.75□□□□□ -0.69
SCG3-203ENST00000558709 RASSF7Q02833 373 aa10.75□□□□□ -0.69
SCG3-203ENST00000558709 PLEKHM2Q8IWE5 1019 aa10.75□□□□□ -0.69
SCG3-203ENST00000558709 NLRP3Q96P20 1036 aa10.75□□□□□ -0.69
SCG3-203ENST00000558709 SLC4A9Q96Q91 983 aa10.75□□□□□ -0.69
SCG3-203ENST00000558709 TESK2Q96S53 571 aa10.75□□□□□ -0.69
SCG3-203ENST00000558709 PCDHGA11Q9Y5H2 935 aa10.75□□□□□ -0.69
SCG3-203ENST00000558709 CNTNAP4Q9C0A0 1308 aa10.75□□□□□ -0.69
SCG3-203ENST00000558709 ARFGEF2Q9Y6D5 1785 aa10.75□□□□□ -0.69
SCG3-203ENST00000558709 CHRNA5P30532 468 aa10.74□□□□□ -0.69
SCG3-203ENST00000558709 TBC1D9Q6ZT07 1266 aa10.74□□□□□ -0.69
SCG3-203ENST00000558709 IRF7Q92985 503 aa10.74□□□□□ -0.69
SCG3-203ENST00000558709 SCN4AP35499 1836 aa10.73□□□□□ -0.69
SCG3-203ENST00000558709 RPS6KA4O75676 772 aa10.73□□□□□ -0.69
SCG3-203ENST00000558709 PHKG2P15735 406 aa10.73□□□□□ -0.69
SCG3-203ENST00000558709 CENPCQ03188 943 aa10.73□□□□□ -0.69
SCG3-203ENST00000558709 DDR1Q08345 913 aa10.73□□□□□ -0.69
SCG3-203ENST00000558709 NCOA4Q13772 614 aa10.73□□□□□ -0.69
SCG3-203ENST00000558709 PRICKLE2Q7Z3G6 844 aa10.73□□□□□ -0.69
SCG3-203ENST00000558709 TONSLQ96HA7 1378 aa10.73□□□□□ -0.69
SCG3-203ENST00000558709 ATP9BO43861 1147 aa10.72□□□□□ -0.69
SCG3-203ENST00000558709 VEGFAP15692 232 aaPredicted RBP10.72□□□□□ -0.69
SCG3-203ENST00000558709 EML3Q32P44 896 aa10.72□□□□□ -0.69
SCG3-203ENST00000558709 IFNL2Q8IZJ0 200 aa10.72□□□□□ -0.69
SCG3-203ENST00000558709 NANOS1Q8WY41 292 aaKnown RBP10.72□□□□□ -0.69
SCG3-203ENST00000558709 SRP68Q9UHB9 627 aaKnown RBP10.72□□□□□ -0.69
SCG3-203ENST00000558709 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.69
SCG3-203ENST00000558709 GLTPD2A6NH11 291 aa10.71□□□□□ -0.69
SCG3-203ENST00000558709 TMEM229AB2RXF0 380 aa10.71□□□□□ -0.69
SCG3-203ENST00000558709 GMPRP36959 345 aa10.71□□□□□ -0.69
SCG3-203ENST00000558709 WDR44Q5JSH3 913 aa10.71□□□□□ -0.69
SCG3-203ENST00000558709 USP42Q9H9J4 1324 aaKnown RBP10.7□□□□□ -0.7
SCG3-203ENST00000558709 USP17L3A6NCW0 530 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 USP17L4A6NCW7 530 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 FOXN1O15353 648 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 INHAP05111 366 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 RHOQP17081 205 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 ITGA6P23229 1130 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 GDF10P55107 478 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 NBPF10Q6P3W6 841 aaKnown RBP10.7□□□□□ -0.7
SCG3-203ENST00000558709 USP17L2Q6R6M4 530 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 USP17L1Q7RTZ2 530 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 DEPDC4Q8N2C3 294 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 NBPF15Q8N660 670 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 MKRN1Q9UHC7 482 aaKnown RBP10.7□□□□□ -0.7
SCG3-203ENST00000558709 NOD1Q9Y239 953 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 SLX4Q8IY92 1834 aa10.7□□□□□ -0.7
SCG3-203ENST00000558709 POLRMTO00411 1230 aaKnown RBP10.69□□□□□ -0.7
SCG3-203ENST00000558709 PPM1GO15355 546 aaPredicted RBP10.69□□□□□ -0.7
SCG3-203ENST00000558709 LMNB1P20700 586 aa10.69□□□□□ -0.7
SCG3-203ENST00000558709 POU4F2Q12837 409 aa10.69□□□□□ -0.7
SCG3-203ENST00000558709 UBR2Q8IWV8 1755 aa10.69□□□□□ -0.7
SCG3-203ENST00000558709 PDE4DIPQ5VU43 2346 aa10.69□□□□□ -0.7
SCG3-203ENST00000558709 SCN7AQ01118 1682 aa10.69□□□□□ -0.7
SCG3-203ENST00000558709 TRPM7Q96QT4 1865 aa10.68□□□□□ -0.7
SCG3-203ENST00000558709 CRKLP46109 303 aaKnown RBP10.68□□□□□ -0.7
SCG3-203ENST00000558709 GTF2IP78347 998 aa10.68□□□□□ -0.7
SCG3-203ENST00000558709 CUEDC1Q9NWM3 386 aaPredicted RBP10.68□□□□□ -0.7
SCG3-203ENST00000558709 WASHC2AQ641Q2 1341 aa10.67□□□□□ -0.7
SCG3-203ENST00000558709 ERVV-2B6SEH9 535 aa10.67□□□□□ -0.7
SCG3-203ENST00000558709 GPR161Q8N6U8 529 aaKnown RBP10.67□□□□□ -0.7
SCG3-203ENST00000558709 ZSCAN10Q96SZ4 725 aaPredicted RBP10.67□□□□□ -0.7
SCG3-203ENST00000558709 DYRK1BQ9Y463 629 aa10.67□□□□□ -0.7
SCG3-203ENST00000558709 GTF3C3Q9Y5Q9 886 aa10.67□□□□□ -0.7
SCG3-203ENST00000558709 ADAMTSL1Q8N6G6 1762 aa10.67□□□□□ -0.7
SCG3-203ENST00000558709 CNTNAP1P78357 1384 aa10.66□□□□□ -0.7
SCG3-203ENST00000558709 NFKBIEO00221 500 aa10.66□□□□□ -0.7
SCG3-203ENST00000558709 PTCD1O75127 700 aaKnown RBP10.66□□□□□ -0.7
SCG3-203ENST00000558709 ZNF295-AS1Q8N0V1 137 aa10.66□□□□□ -0.7
SCG3-203ENST00000558709 PRDM10Q9NQV6 1147 aa10.66□□□□□ -0.7
SCG3-203ENST00000558709 MAFBQ9Y5Q3 323 aaPredicted RBP10.66□□□□□ -0.7
SCG3-203ENST00000558709 CASP8AP2Q9UKL3 1982 aa10.66□□□□□ -0.7
SCG3-203ENST00000558709 THSD7BQ9C0I4 1608 aa10.66□□□□□ -0.7
SCG3-203ENST00000558709 CARMIL3Q8ND23 1372 aa10.65□□□□□ -0.7
SCG3-203ENST00000558709 ZBTB7BO15156 539 aaPredicted RBP10.65□□□□□ -0.7
SCG3-203ENST00000558709 LORP23490 312 aaPredicted RBP10.65□□□□□ -0.7
SCG3-203ENST00000558709 TM4SF1P30408 202 aa10.65□□□□□ -0.7
SCG3-203ENST00000558709 MTFR1Q15390 333 aa10.65□□□□□ -0.7
SCG3-203ENST00000558709 TLR1Q15399 786 aa10.65□□□□□ -0.7
SCG3-203ENST00000558709 TAS1R3Q7RTX0 852 aa10.65□□□□□ -0.7
SCG3-203ENST00000558709 CALR3Q96L12 384 aaKnown RBP10.65□□□□□ -0.7
SCG3-203ENST00000558709 BCORQ6W2J9 1755 aa10.65□□□□□ -0.71
SCG3-203ENST00000558709 PALM3A6NDB9 673 aaPredicted RBP10.64□□□□□ -0.71
SCG3-203ENST00000558709 CLDN10P78369 228 aa10.64□□□□□ -0.71
SCG3-203ENST00000558709 USPL1Q5W0Q7 1092 aa10.64□□□□□ -0.71
SCG3-203ENST00000558709 TFIP11Q9UBB9 837 aaKnown RBP10.64□□□□□ -0.71
SCG3-203ENST00000558709 KIAA1024Q9UPX6 916 aa10.64□□□□□ -0.71
SCG3-203ENST00000558709 HSP90AB1P08238 724 aaKnown RBP10.63□□□□□ -0.71
SCG3-203ENST00000558709 CTCFP49711 727 aaPredicted RBP10.63□□□□□ -0.71
SCG3-203ENST00000558709 SMTNP53814 917 aa10.63□□□□□ -0.71
SCG3-203ENST00000558709 CABP4P57796 275 aa10.63□□□□□ -0.71
SCG3-203ENST00000558709 KRT76Q01546 638 aa10.63□□□□□ -0.71
SCG3-203ENST00000558709 EIF4A2Q14240 407 aaKnown RBP10.63□□□□□ -0.71
SCG3-203ENST00000558709 C4orf17Q53FE4 359 aa10.63□□□□□ -0.71
SCG3-203ENST00000558709 INTS5Q6P9B9 1019 aaKnown RBP10.63□□□□□ -0.71
SCG3-203ENST00000558709 TTLL6Q8N841 843 aa10.63□□□□□ -0.71
SCG3-203ENST00000558709 PPP1R12CQ9BZL4 782 aa10.63□□□□□ -0.71
SCG3-203ENST00000558709 IQSEC3Q9UPP2 1182 aaPredicted RBP10.63□□□□□ -0.71
SCG3-203ENST00000558709 TNRC18O15417 2968 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms