RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 RAB3IPQ96QF0 476 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 PSMD1Q99460 953 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 DONSONQ9NYP3 566 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 GMNNO75496 209 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 BTBD11A6QL63 1104 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 ADCY8P40145 1251 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 TCHPQ9BT92 498 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 SATB1Q01826 763 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 SPDL1Q96EA4 605 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 PKP1Q13835 747 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 NUDCD3Q8IVD9 361 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 NUTM2AQ8IVF1 878 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 RILPQ96NA2 401 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 TADA3O75528 432 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 PSMD6Q15008 389 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 SDCCAG8Q86SQ7 713 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 KIFC2Q96AC6 838 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 ZKSCAN3Q9BRR0 538 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 CREB3L3Q68CJ9 461 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 MAK16Q9BXY0 300 aaKnown RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 ANAPC4Q9UJX5 808 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 UTP11Q9Y3A2 253 aaKnown RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 RETREG2Q8NC44 543 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 FAM71BQ8TC56 605 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 TCP11L1Q9NUJ3 509 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 DHX9Q08211 1270 aaKnown RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 GRIPAP1Q4V328 841 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 RHPN1Q8TCX5 695 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 SYNCQ9H7C4 482 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 POLKQ9UBT6 870 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 TCEAL9Q9UHQ7 104 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 GOLGA8KD6RF30 607 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 KRIT1O00522 736 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 EHHADHQ08426 723 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 RBL2Q08999 1139 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 N4BP2L2Q92802 583 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 CCT8L2Q96SF2 557 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 NOVA2Q9UNW9 492 aaKnown RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 KRT86O43790 486 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 IDH1O75874 414 aaKnown RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 BRD1O95696 1058 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 HIBCHQ6NVY1 386 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 RRAGAQ7L523 313 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 TPP2P29144 1249 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 HSP90AA5PQ58FG0 334 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 TSPYL6Q8N831 410 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 CASP8Q14790 479 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 TAF11Q15544 211 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 MRPS27Q92552 414 aaKnown RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 RNF40O75150 1001 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 GGCXP38435 758 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 NLRP6P59044 892 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 MCMDC2Q4G0Z9 681 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 MED4Q9NPJ6 270 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 PSMC4P43686 418 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 LGSNQ5TDP6 509 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 CTTNBP2NLQ9P2B4 639 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 SATB2Q9UPW6 733 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 RABGAP1Q9Y3P9 1069 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 TRMT1LQ7Z2T5 733 aaKnown RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 MCM10Q7L590 875 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC43Q96MW1 224 aaKnown RBP4.14□□□□□ -1.75
ATXN3-248ENST00000558190 NFE2L2Q16236 605 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 MFSD6Q6ZSS7 791 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 AMOTL1Q8IY63 956 aa4.14□□□□□ -1.75
ATXN3-248ENST00000558190 TRIM75PA6NK02 468 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 BCAP29Q9UHQ4 241 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 PCDHA7Q9UN72 937 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 TMEM67Q5HYA8 995 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 C6orf118Q5T5N4 469 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 IQCA1Q86XH1 822 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 EFCAB13Q8IY85 973 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 ZNF644Q9H582 1327 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-248ENST00000558190 CETN1Q12798 172 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 LONRF3Q496Y0 759 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 PSMB7Q99436 277 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 FAM167BQ9BTA0 163 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 BIN2Q9UBW5 565 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-248ENST00000558190 FERMT2Q96AC1 680 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 SLC44A4Q53GD3 710 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 CARD10Q9BWT7 1032 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 CCDC97Q96F63 343 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-248ENST00000558190 ERBB4Q15303 1308 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 PHF20L1A8MW92 1017 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 GIGYF1O75420 1035 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-248ENST00000558190 POLR2DO15514 142 aaKnown RBP4.13□□□□□ -1.75
ATXN3-248ENST00000558190 TNIP1Q15025 636 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 SRGAP1Q7Z6B7 1085 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 JAKMIP2Q96AA8 810 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 PLCB1Q9NQ66 1216 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 RMND1Q9NWS8 449 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 TXNDC9O14530 226 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 FBXO38Q6PIJ6 1188 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 TTC5Q8N0Z6 440 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 ST7Q9NRC1 585 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 SCOCQ9UIL1 159 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 RASAL2Q9UJF2 1139 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 PCDHA13Q9Y5I0 950 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 H7C1D1 291 aa4.13□□□□□ -1.75
ATXN3-248ENST00000558190 TRAF5O00463 557 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms