RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ASIC1P78348 528 aa13.53□□□□□ -0.24
NEK9-210ENST00000557026 RILPL1Q5EBL4 403 aa13.53□□□□□ -0.24
NEK9-210ENST00000557026 C6orf163Q5TEZ5 329 aa13.53□□□□□ -0.24
NEK9-210ENST00000557026 KRT25Q7Z3Z0 450 aa13.53□□□□□ -0.24
NEK9-210ENST00000557026 BRF1Q92994 677 aa13.53□□□□□ -0.24
NEK9-210ENST00000557026 TMCO5BA8MYB1 307 aa13.53□□□□□ -0.24
NEK9-210ENST00000557026 CCNA1P78396 465 aa13.53□□□□□ -0.24
NEK9-210ENST00000557026 SPECC1LQ69YQ0 1117 aa13.53□□□□□ -0.24
NEK9-210ENST00000557026 ELMSAN1Q6PJG2 1045 aa13.53□□□□□ -0.24
NEK9-210ENST00000557026 LLPHQ9BRT6 129 aaKnown RBP13.53□□□□□ -0.24
NEK9-210ENST00000557026 ESYT1Q9BSJ8 1104 aa13.53□□□□□ -0.24
NEK9-210ENST00000557026 THRAP3Q9Y2W1 955 aaKnown RBP13.53□□□□□ -0.24
NEK9-210ENST00000557026 F8W031 263 aaPredicted RBP13.52□□□□□ -0.24
NEK9-210ENST00000557026 RFX1P22670 979 aa13.52□□□□□ -0.24
NEK9-210ENST00000557026 GNPTABQ3T906 1256 aa13.52□□□□□ -0.24
NEK9-210ENST00000557026 EXOC8Q8IYI6 725 aa13.52□□□□□ -0.24
NEK9-210ENST00000557026 HOXA7P31268 230 aaPredicted RBP13.52□□□□□ -0.24
NEK9-210ENST00000557026 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.24
NEK9-210ENST00000557026 CENPHQ9H3R5 247 aa13.52□□□□□ -0.25
NEK9-210ENST00000557026 PARD3Q8TEW0 1356 aa13.52□□□□□ -0.25
NEK9-210ENST00000557026 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.25
NEK9-210ENST00000557026 DEXIO95424 95 aa13.52□□□□□ -0.25
NEK9-210ENST00000557026 SLC39A6Q13433 755 aa13.52□□□□□ -0.25
NEK9-210ENST00000557026 MAGEB6Q8N7X4 407 aa13.52□□□□□ -0.25
NEK9-210ENST00000557026 APPBP2Q92624 585 aa13.52□□□□□ -0.25
NEK9-210ENST00000557026 FRMD4BQ9Y2L6 1034 aa13.52□□□□□ -0.25
NEK9-210ENST00000557026 NOP56O00567 594 aaKnown RBP13.51□□□□□ -0.25
NEK9-210ENST00000557026 ZSCAN22P10073 491 aaPredicted RBP13.51□□□□□ -0.25
NEK9-210ENST00000557026 STRN3Q13033 797 aa13.51□□□□□ -0.25
NEK9-210ENST00000557026 DCTPP1Q9H773 170 aa13.51□□□□□ -0.25
NEK9-210ENST00000557026 TEKT1Q969V4 418 aa13.51□□□□□ -0.25
NEK9-210ENST00000557026 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
NEK9-210ENST00000557026 ARPP21Q9UBL0 812 aaPredicted RBP13.51□□□□□ -0.25
NEK9-210ENST00000557026 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
NEK9-210ENST00000557026 TACC1O75410 805 aa13.51□□□□□ -0.25
NEK9-210ENST00000557026 P4HA1P13674 534 aa13.51□□□□□ -0.25
NEK9-210ENST00000557026 CNGA1P29973 690 aa13.51□□□□□ -0.25
NEK9-210ENST00000557026 MRPS9P82933 396 aaKnown RBP13.51□□□□□ -0.25
NEK9-210ENST00000557026 TBC1D9Q6ZT07 1266 aa13.51□□□□□ -0.25
NEK9-210ENST00000557026 INTS4Q96HW7 963 aaKnown RBP13.51□□□□□ -0.25
NEK9-210ENST00000557026 HAND2P61296 217 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 MIS12Q9H081 205 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 ARHGEF37A1IGU5 675 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 GPR162Q16538 588 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 MCF2L2Q86YR7 1114 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 TTC14Q96N46 770 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 TPCN1Q9ULQ1 816 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 MACROD2A1Z1Q3 448 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 RXRBP28702 533 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 TRIM14Q14142 442 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 NAP1L3Q99457 506 aaPredicted RBP13.5□□□□□ -0.25
NEK9-210ENST00000557026 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.5□□□□□ -0.25
NEK9-210ENST00000557026 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 SV2BQ7L1I2 683 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 FNBP1Q96RU3 617 aa13.5□□□□□ -0.25
NEK9-210ENST00000557026 CGNQ9P2M7 1197 aaKnown RBP13.5□□□□□ -0.25
NEK9-210ENST00000557026 NOC2LQ9Y3T9 749 aaKnown RBP13.5□□□□□ -0.25
NEK9-210ENST00000557026 NPHP4O75161 1426 aaPredicted RBP13.5□□□□□ -0.25
NEK9-210ENST00000557026 KIF11P52732 1056 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 SKIDA1Q1XH10 827 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 SLC17A8Q8NDX2 589 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 JPH2Q9BR39 696 aaPredicted RBP13.49□□□□□ -0.25
NEK9-210ENST00000557026 SDSP20132 328 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 TICAM2Q86XR7 235 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 DCPSQ96C86 337 aaKnown RBP13.49□□□□□ -0.25
NEK9-210ENST00000557026 SRRTQ9BXP5 876 aaKnown RBP13.49□□□□□ -0.25
NEK9-210ENST00000557026 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 ABCA5Q8WWZ7 1642 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 CALUO43852 315 aaPredicted RBP13.49□□□□□ -0.25
NEK9-210ENST00000557026 ITGA6P23229 1130 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 CCDC102AQ96A19 550 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 IQCGQ9H095 443 aaKnown RBP13.49□□□□□ -0.25
NEK9-210ENST00000557026 CCDC175P0C221 793 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 EPB41P11171 864 aaKnown RBP13.49□□□□□ -0.25
NEK9-210ENST00000557026 SPECC1Q5M775 1068 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 RABGAP1Q9Y3P9 1069 aa13.49□□□□□ -0.25
NEK9-210ENST00000557026 DNMT1P26358 1616 aaKnown RBP13.49□□□□□ -0.25
NEK9-210ENST00000557026 RIMBP2O15034 1052 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 GALNT17Q6IS24 598 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 OTUD6AQ7L8S5 288 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 RGS22Q8NE09 1264 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.48□□□□□ -0.25
NEK9-210ENST00000557026 V9GYY5 206 aaPredicted RBP13.48□□□□□ -0.25
NEK9-210ENST00000557026 ZSCAN30Q86W11 494 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 TSGA10Q9BZW7 698 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 MTUS1Q9ULD2 1270 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 CNNM4Q6P4Q7 775 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 NEK11Q8NG66 645 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 STK10O94804 968 aaKnown RBP13.48□□□□□ -0.25
NEK9-210ENST00000557026 CROCCP2Q86T23 111 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 RAB3IL1Q8TBN0 382 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 NSRP1Q9H0G5 558 aaKnown RBP13.48□□□□□ -0.25
NEK9-210ENST00000557026 CFAP43Q8NDM7 1665 aa13.48□□□□□ -0.25
NEK9-210ENST00000557026 PPIP5K2O43314 1243 aa13.47□□□□□ -0.25
NEK9-210ENST00000557026 ALDH3A1P30838 453 aa13.47□□□□□ -0.25
NEK9-210ENST00000557026 ZNF165P49910 485 aa13.47□□□□□ -0.25
NEK9-210ENST00000557026 SUPT20HL1Q3ZLR7 823 aa13.47□□□□□ -0.25
NEK9-210ENST00000557026 CEP112Q8N8E3 955 aa13.47□□□□□ -0.25
NEK9-210ENST00000557026 SNX21Q969T3 373 aa13.47□□□□□ -0.25
NEK9-210ENST00000557026 MEIS3Q99687 375 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms