RNA–Protein interactions for RNA: ENST00000557013.1

SAMD4A-211, Transcript of sterile alpha motif domain containing 4A, humanhuman

TSL 1 (best)

Gene SAMD4A, Length 3,637 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-211ENST00000557013 HIP1O00291 1037 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 TBC1D8O95759 1140 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 RXRBP28702 533 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 TEFQ10587 303 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 BRF1Q92994 677 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 PGBD1Q96JS3 809 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 TRIM6Q9C030 488 aaPredicted RBP9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 TAF6LQ9Y6J9 622 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 TTC21AQ8NDW8 1320 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 H3BQF6 201 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 KCNQ3O43525 872 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 RPS6KB1P23443 525 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 NBPF6Q5VWK0 638 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 CC2D1AQ6P1N0 951 aaPredicted RBP9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 CPLX2Q6PUV4 134 aaKnown RBP9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 NBPF11Q86T75 865 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 NBPF5PQ86XG9 351 aaPredicted RBP9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 FMNL3Q8IVF7 1028 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 NBPF4Q96M43 638 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 NUCKS1Q9H1E3 243 aaKnown RBP9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 MKRN1Q9UHC7 482 aaKnown RBP9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 KDRP35968 1356 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 A0A087WWV3 80 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 ELF1P32519 619 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 NEDD9Q14511 834 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 CWF19L2Q2TBE0 894 aaKnown RBP9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 WWC2Q6AWC2 1192 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 NRKQ7Z2Y5 1582 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 CNNM3Q8NE01 707 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 GNL3LQ9NVN8 582 aaKnown RBP9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 MAP3K2Q9Y2U5 619 aa9.39□□□□□ -0.91
SAMD4A-211ENST00000557013 NEMFO60524 1076 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 PAIP2Q9BPZ3 127 aaKnown RBP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 LGR6Q9HBX8 967 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 ODF2LQ9ULJ1 636 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 SPATA31A3Q5VYP0 1347 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 KIF1AQ12756 1690 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 ANKARQ7Z5J8 1434 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 PPFIA3O75145 1194 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 SSBP05455 408 aaKnown RBP eCLIP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 SFPQP23246 707 aaKnown RBP eCLIP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 HOXC9P31274 260 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 AIMP1Q12904 312 aaKnown RBP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 JMYQ8N9B5 988 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 ZSCAN16Q9H4T2 348 aaPredicted RBP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 CFAP45Q9UL16 551 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 CAPN7Q9Y6W3 813 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 ZRANB2O95218 330 aaKnown RBP eCLIP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 CCT5P48643 541 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 EIF4A1P60842 406 aaKnown RBP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 TOB2Q14106 344 aaPredicted RBP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 NBPF9Q3BBW0 867 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 CCDC73Q6ZRK6 1079 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 C11orf57Q6ZUT1 292 aaPredicted RBP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 EAF2Q96CJ1 260 aaPredicted RBP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 LRRC2Q9BYS8 371 aa9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 USP42Q9H9J4 1324 aaKnown RBP9.38□□□□□ -0.91
SAMD4A-211ENST00000557013 EBAG9O00559 213 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 N4BP1O75113 896 aaKnown RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 INPP5BP32019 993 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 EIF5P55010 431 aaKnown RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 TRDNQ13061 729 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 LONRF2Q1L5Z9 754 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 JAKMIP3Q5VZ66 844 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 NYAP1Q6ZVC0 841 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 CCAR1Q8IX12 1150 aaKnown RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 KCNB2Q92953 911 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 TLR7Q9NYK1 1049 aaKnown RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 KAT6BQ8WYB5 2073 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 MON2Q7Z3U7 1717 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 BTBD11A6QL63 1104 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 KINO60870 393 aaKnown RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 KIAA0754O94854 1291 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 TMC6Q7Z403 805 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 ERCC4Q92889 916 aaPredicted RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 MIEF2Q96C03 454 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 EDC3Q96F86 508 aaKnown RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 THOC1Q96FV9 657 aaKnown RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 BIN2Q9UBW5 565 aaPredicted RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 G3BP2Q9UN86 482 aaKnown RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 PEAK1Q9H792 1746 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 AP1G2O75843 785 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 STX1AQ16623 288 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 ZNF772Q68DY9 489 aaPredicted RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 ZNF589Q86UQ0 364 aaPredicted RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 ANKRD18AQ8IVF6 992 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 FAM107BQ9H098 131 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 SPATS2LQ9NUQ6 558 aaKnown RBP9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 BABAM1Q9NWV8 329 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 TNS3Q68CZ2 1445 aa9.37□□□□□ -0.91
SAMD4A-211ENST00000557013 ITSN1Q15811 1721 aa9.36□□□□□ -0.91
SAMD4A-211ENST00000557013 CAVIN2O95810 425 aa9.36□□□□□ -0.91
SAMD4A-211ENST00000557013 RPSAP08865 295 aaKnown RBP9.36□□□□□ -0.91
SAMD4A-211ENST00000557013 GBP2P32456 591 aaPredicted RBP9.36□□□□□ -0.91
SAMD4A-211ENST00000557013 PPP2R3AQ06190 1150 aa9.36□□□□□ -0.91
SAMD4A-211ENST00000557013 ACTN3Q08043 901 aaPredicted RBP9.36□□□□□ -0.91
SAMD4A-211ENST00000557013 Q6ZUG5 572 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms