RNA–Protein interactions for RNA: ENST00000556830.1

LRP1-212, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 1,847 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-212ENST00000556830 CCDC34Q96HJ3 373 aa14.71□□□□□ -0.06
LRP1-212ENST00000556830 UTP14AQ9BVJ6 771 aaKnown RBP14.71□□□□□ -0.06
LRP1-212ENST00000556830 AGXT2Q9BYV1 514 aa14.71□□□□□ -0.06
LRP1-212ENST00000556830 MED4Q9NPJ6 270 aa14.71□□□□□ -0.06
LRP1-212ENST00000556830 ATP2B1P20020 1258 aa14.7□□□□□ -0.06
LRP1-212ENST00000556830 GNG11P61952 73 aa14.7□□□□□ -0.06
LRP1-212ENST00000556830 CEBPZQ03701 1054 aaKnown RBP14.7□□□□□ -0.06
LRP1-212ENST00000556830 SRGAP1Q7Z6B7 1085 aa14.7□□□□□ -0.06
LRP1-212ENST00000556830 KIFC2Q96AC6 838 aa14.7□□□□□ -0.06
LRP1-212ENST00000556830 PTPDC1A2A3K4 754 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 DTNBO60941 627 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 AXDND1Q5T1B0 1012 aaPredicted RBP14.69□□□□□ -0.06
LRP1-212ENST00000556830 BRINP3Q76B58 766 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 BRAPQ7Z569 592 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 TMEM139Q8IV31 216 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 LINC00301Q8NCQ3 95 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 TCEANC2Q96MN5 208 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 PHAXQ9H814 394 aaKnown RBP14.69□□□□□ -0.06
LRP1-212ENST00000556830 TUBE1Q9UJT0 475 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 NEDD4P46934 1319 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 SCN11AQ9UI33 1791 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 ADAMTS7Q9UKP4 1686 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 EIF3CLB5ME19 914 aaKnown RBP14.69□□□□□ -0.06
LRP1-212ENST00000556830 H3BQF6 201 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 CMA1P23946 247 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 NDUFA8P51970 172 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 G3BP1Q13283 466 aaKnown RBP eCLIP14.69□□□□□ -0.06
LRP1-212ENST00000556830 HSP90B2PQ58FF3 399 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 BEND6Q5SZJ8 279 aaPredicted RBP14.69□□□□□ -0.06
LRP1-212ENST00000556830 DHX32Q7L7V1 743 aaKnown RBP14.69□□□□□ -0.06
LRP1-212ENST00000556830 FBXL16Q8N461 479 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 ERCC4Q92889 916 aaPredicted RBP14.69□□□□□ -0.06
LRP1-212ENST00000556830 ZNF274Q96GC6 653 aaPredicted RBP14.69□□□□□ -0.06
LRP1-212ENST00000556830 EIF3CQ99613 913 aaKnown RBP14.69□□□□□ -0.06
LRP1-212ENST00000556830 NHSL1Q5SYE7 1610 aa14.69□□□□□ -0.06
LRP1-212ENST00000556830 CEMIPQ8WUJ3 1361 aa14.68□□□□□ -0.06
LRP1-212ENST00000556830 FANCGO15287 622 aa14.68□□□□□ -0.06
LRP1-212ENST00000556830 SERPINC1P01008 464 aa14.68□□□□□ -0.06
LRP1-212ENST00000556830 CHMP4BP1P59074 171 aa14.68□□□□□ -0.06
LRP1-212ENST00000556830 TBX2Q13207 712 aaPredicted RBP14.68□□□□□ -0.06
LRP1-212ENST00000556830 SF3A1Q15459 793 aaKnown RBP14.68□□□□□ -0.06
LRP1-212ENST00000556830 RPAINQ86UA6 219 aa14.68□□□□□ -0.06
LRP1-212ENST00000556830 ELOA2Q8IYF1 753 aaPredicted RBP14.68□□□□□ -0.06
LRP1-212ENST00000556830 BAG1Q99933 345 aaPredicted RBP14.68□□□□□ -0.06
LRP1-212ENST00000556830 SPATA31A3Q5VYP0 1347 aa14.68□□□□□ -0.06
LRP1-212ENST00000556830 STK38Q15208 465 aa14.67□□□□□ -0.06
LRP1-212ENST00000556830 ZNF530Q6P9A1 599 aaPredicted RBP14.67□□□□□ -0.06
LRP1-212ENST00000556830 CCDC91Q7Z6B0 441 aa14.67□□□□□ -0.06
LRP1-212ENST00000556830 NECTIN2Q92692 538 aa14.67□□□□□ -0.06
LRP1-212ENST00000556830 CEP89Q96ST8 783 aa14.67□□□□□ -0.06
LRP1-212ENST00000556830 VPS18Q9P253 973 aa14.67□□□□□ -0.06
LRP1-212ENST00000556830 L1RE1Q9UN81 338 aa14.67□□□□□ -0.06
LRP1-212ENST00000556830 UTYO14607 1347 aa14.67□□□□□ -0.06
LRP1-212ENST00000556830 PKD1L3Q7Z443 1732 aa14.67□□□□□ -0.06
LRP1-212ENST00000556830 PI4KAP2A4QPH2 592 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 ZNF202O95125 648 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 EIF5P55010 431 aaKnown RBP14.66□□□□□ -0.06
LRP1-212ENST00000556830 CFAP100Q494V2 611 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 PI4KAP1Q8N8J0 262 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 SYTL4Q96C24 671 aaPredicted RBP14.66□□□□□ -0.06
LRP1-212ENST00000556830 VIPAS39Q9H9C1 493 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 LGR6Q9HBX8 967 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 A0A1B0GVL5 298 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 SPTLC2O15270 562 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 CUTAO60888 179 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 PPFIA4O75335 1185 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 CTDNEP1O95476 244 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 LMOD1P29536 600 aaPredicted RBP14.66□□□□□ -0.06
LRP1-212ENST00000556830 CHRNA2Q15822 529 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 OLFM4Q6UX06 510 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 ILDR1Q86SU0 546 aaPredicted RBP14.66□□□□□ -0.06
LRP1-212ENST00000556830 ZNF589Q86UQ0 364 aaPredicted RBP14.66□□□□□ -0.06
LRP1-212ENST00000556830 CTCFLQ8NI51 663 aaPredicted RBP14.66□□□□□ -0.06
LRP1-212ENST00000556830 EAF2Q96CJ1 260 aaPredicted RBP14.66□□□□□ -0.06
LRP1-212ENST00000556830 WDR24Q96S15 920 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 NAA15Q9BXJ9 866 aaKnown RBP14.66□□□□□ -0.06
LRP1-212ENST00000556830 HSD3B7Q9H2F3 369 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 PDE11AQ9HCR9 933 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 MEGF6O75095 1541 aa14.66□□□□□ -0.06
LRP1-212ENST00000556830 A0A087WUV0 522 aaPredicted RBP14.65□□□□□ -0.06
LRP1-212ENST00000556830 COL9A3Q14050 684 aaPredicted RBP14.65□□□□□ -0.06
LRP1-212ENST00000556830 MMS22LQ6ZRQ5 1243 aa14.65□□□□□ -0.06
LRP1-212ENST00000556830 PACS2Q86VP3 889 aa14.65□□□□□ -0.06
LRP1-212ENST00000556830 FTOQ9C0B1 505 aaKnown RBP eCLIP14.65□□□□□ -0.06
LRP1-212ENST00000556830 C9orf78Q9NZ63 289 aaPredicted RBP14.65□□□□□ -0.06
LRP1-212ENST00000556830 CDC23Q9UJX2 597 aa14.65□□□□□ -0.06
LRP1-212ENST00000556830 TAF6LQ9Y6J9 622 aa14.65□□□□□ -0.06
LRP1-212ENST00000556830 CARMIL3Q8ND23 1372 aa14.65□□□□□ -0.06
LRP1-212ENST00000556830 FAM237AA0A1B0GTK4 181 aa14.64□□□□□ -0.07
LRP1-212ENST00000556830 SASH1O94885 1247 aa14.64□□□□□ -0.07
LRP1-212ENST00000556830 ATP5JP18859 108 aa14.64□□□□□ -0.07
LRP1-212ENST00000556830 MCM3P25205 808 aa14.64□□□□□ -0.07
LRP1-212ENST00000556830 USP8P40818 1118 aa14.64□□□□□ -0.07
LRP1-212ENST00000556830 EXOSC10Q01780 885 aaKnown RBP14.64□□□□□ -0.07
LRP1-212ENST00000556830 CCDC175P0C221 793 aa14.64□□□□□ -0.07
LRP1-212ENST00000556830 EIF4A1P60842 406 aaKnown RBP14.64□□□□□ -0.07
LRP1-212ENST00000556830 MCMDC2Q4G0Z9 681 aa14.64□□□□□ -0.07
LRP1-212ENST00000556830 PLEKHO1Q53GL0 409 aaPredicted RBP14.64□□□□□ -0.07
LRP1-212ENST00000556830 DNAJC21Q5F1R6 531 aaKnown RBP14.64□□□□□ -0.07
LRP1-212ENST00000556830 MCTP2Q6DN12 878 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms