RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.12■■■□□ 2.09
PABPN1-207ENST00000556821 SLC10A3P09131 477 aa28.11■■■□□ 2.09
PABPN1-207ENST00000556821 ZNF157P51786 506 aaPredicted RBP28.11■■■□□ 2.09
PABPN1-207ENST00000556821 CHAF1AQ13111 956 aaPredicted RBP28.11■■■□□ 2.09
PABPN1-207ENST00000556821 HPS5Q9UPZ3 1129 aa28.11■■■□□ 2.09
PABPN1-207ENST00000556821 AOX1Q06278 1338 aa28.11■■■□□ 2.09
PABPN1-207ENST00000556821 DLGAP5Q15398 846 aa28.1■■■□□ 2.09
PABPN1-207ENST00000556821 CFAP100Q494V2 611 aa28.1■■■□□ 2.09
PABPN1-207ENST00000556821 AKAP11Q9UKA4 1901 aa28.1■■■□□ 2.09
PABPN1-207ENST00000556821 MYO5AQ9Y4I1 1855 aaKnown RBP28.09■■■□□ 2.09
PABPN1-207ENST00000556821 POLA2Q14181 598 aa28.09■■■□□ 2.09
PABPN1-207ENST00000556821 TTF2Q9UNY4 1162 aaKnown RBP28.09■■■□□ 2.09
PABPN1-207ENST00000556821 SPDYE2BA6NHP3 402 aa28.08■■■□□ 2.09
PABPN1-207ENST00000556821 SPDYE6P0CI01 402 aa28.08■■■□□ 2.09
PABPN1-207ENST00000556821 ADORA1P30542 326 aa28.08■■■□□ 2.09
PABPN1-207ENST00000556821 TFCP2Q12800 502 aa28.08■■■□□ 2.09
PABPN1-207ENST00000556821 SSH3Q8TE77 659 aa28.08■■■□□ 2.09
PABPN1-207ENST00000556821 PRMT6Q96LA8 375 aaPredicted RBP28.08■■■□□ 2.09
PABPN1-207ENST00000556821 OTOFQ9HC10 1997 aa28.08■■■□□ 2.09
PABPN1-207ENST00000556821 FRAT2O75474 233 aaPredicted RBP28.07■■■□□ 2.08
PABPN1-207ENST00000556821 ATP8B2P98198 1209 aa28.07■■■□□ 2.08
PABPN1-207ENST00000556821 TBC1D22AQ8WUA7 517 aa28.07■■■□□ 2.08
PABPN1-207ENST00000556821 PHKA1P46020 1223 aa28.06■■■□□ 2.08
PABPN1-207ENST00000556821 PRAMEF18Q5VWM3 479 aa28.06■■■□□ 2.08
PABPN1-207ENST00000556821 APOBEC3FQ8IUX4 373 aaKnown RBP28.06■■■□□ 2.08
PABPN1-207ENST00000556821 REM2Q8IYK8 340 aaPredicted RBP28.06■■■□□ 2.08
PABPN1-207ENST00000556821 PKN2Q16513 984 aaKnown RBP28.05■■■□□ 2.08
PABPN1-207ENST00000556821 LAMB1P07942 1786 aa28.04■■■□□ 2.08
PABPN1-207ENST00000556821 A0A1B0GUL7 405 aa28.04■■■□□ 2.08
PABPN1-207ENST00000556821 TIMM10P62072 90 aa28.04■■■□□ 2.08
PABPN1-207ENST00000556821 SERPINA10Q9UK55 444 aa28.04■■■□□ 2.08
PABPN1-207ENST00000556821 CLRN2A0PK11 232 aa28.03■■■□□ 2.08
PABPN1-207ENST00000556821 MS4A1P11836 297 aa28.03■■■□□ 2.08
PABPN1-207ENST00000556821 SSC5DA1L4H1 1573 aa28.03■■■□□ 2.08
PABPN1-207ENST00000556821 ZBTB22O15209 634 aa28.02■■■□□ 2.08
PABPN1-207ENST00000556821 CRKP46108 304 aa28.02■■■□□ 2.08
PABPN1-207ENST00000556821 RBM5P52756 815 aaKnown RBP eCLIP28.02■■■□□ 2.081e-6■□□□□ 8
PABPN1-207ENST00000556821 MVPQ14764 893 aaKnown RBP28.02■■■□□ 2.08
PABPN1-207ENST00000556821 CCDC102BQ68D86 513 aa28.02■■■□□ 2.08
PABPN1-207ENST00000556821 AK9Q5TCS8 1911 aa28.01■■■□□ 2.07
PABPN1-207ENST00000556821 G3BP1Q13283 466 aaKnown RBP eCLIP28.01■■■□□ 2.078e-7■□□□□ 8.4
PABPN1-207ENST00000556821 CEP85Q6P2H3 762 aa28.01■■■□□ 2.07
PABPN1-207ENST00000556821 XAGE2Q96GT9 111 aa28.01■■■□□ 2.07
PABPN1-207ENST00000556821 AKAP2Q9Y2D5 859 aa28.01■■■□□ 2.07
PABPN1-207ENST00000556821 COG6Q9Y2V7 657 aa28.01■■■□□ 2.07
PABPN1-207ENST00000556821 HDLBPQ00341 1268 aaKnown RBP28■■■□□ 2.07
PABPN1-207ENST00000556821 RASAL3Q86YV0 1011 aa28■■■□□ 2.07
PABPN1-207ENST00000556821 WDR66Q8TBY9 1149 aa28■■■□□ 2.07
PABPN1-207ENST00000556821 GNL3LQ9NVN8 582 aaKnown RBP28■■■□□ 2.07
PABPN1-207ENST00000556821 SUGT1Q9Y2Z0 365 aa28■■■□□ 2.07
PABPN1-207ENST00000556821 MAST2Q6P0Q8 1798 aa27.99■■■□□ 2.07
PABPN1-207ENST00000556821 SEMA3EO15041 775 aa27.99■■■□□ 2.07
PABPN1-207ENST00000556821 MYO1BO43795 1136 aa27.99■■■□□ 2.07
PABPN1-207ENST00000556821 SPDYE2Q495Y8 402 aa27.99■■■□□ 2.07
PABPN1-207ENST00000556821 MOB2Q70IA6 237 aa27.99■■■□□ 2.07
PABPN1-207ENST00000556821 FKBP1BP68106 108 aa27.98■■■□□ 2.07
PABPN1-207ENST00000556821 GCC1Q96CN9 775 aa27.98■■■□□ 2.07
PABPN1-207ENST00000556821 DEFB129Q9H1M3 183 aa27.98■■■□□ 2.07
PABPN1-207ENST00000556821 TDRD3Q9H7E2 651 aaKnown RBP27.98■■■□□ 2.07
PABPN1-207ENST00000556821 NOP58Q9Y2X3 529 aaKnown RBP27.98■■■□□ 2.07
PABPN1-207ENST00000556821 SALL1Q9NSC2 1324 aa27.97■■■□□ 2.07
PABPN1-207ENST00000556821 RASGRF1Q13972 1273 aa27.97■■■□□ 2.07
PABPN1-207ENST00000556821 C20orf194Q5TEA3 1177 aa27.97■■■□□ 2.07
PABPN1-207ENST00000556821 TEKT1Q969V4 418 aa27.97■■■□□ 2.07
PABPN1-207ENST00000556821 VEZTQ9HBM0 779 aa27.97■■■□□ 2.07
PABPN1-207ENST00000556821 ZNF70Q9UC06 446 aaPredicted RBP27.97■■■□□ 2.07
PABPN1-207ENST00000556821 DENND2AQ9ULE3 1009 aa27.97■■■□□ 2.07
PABPN1-207ENST00000556821 DDX19BQ9UMR2 479 aa27.97■■■□□ 2.07
PABPN1-207ENST00000556821 MAST3O60307 1309 aa27.96■■■□□ 2.07
PABPN1-207ENST00000556821 SURF6O75683 361 aaKnown RBP27.96■■■□□ 2.07
PABPN1-207ENST00000556821 PRDX5P30044 214 aa27.96■■■□□ 2.07
PABPN1-207ENST00000556821 ZNF296Q8WUU4 475 aaPredicted RBP27.96■■■□□ 2.07
PABPN1-207ENST00000556821 CDK5RAP2Q96SN8 1893 aa27.95■■■□□ 2.07
PABPN1-207ENST00000556821 NOM1Q5C9Z4 860 aaKnown RBP27.95■■■□□ 2.06
PABPN1-207ENST00000556821 ZDHHC15Q96MV8 337 aa27.95■■■□□ 2.06
PABPN1-207ENST00000556821 NEUROD6Q96NK8 337 aa27.95■■■□□ 2.06
PABPN1-207ENST00000556821 MRIQ9BWK5 157 aa27.95■■■□□ 2.06
PABPN1-207ENST00000556821 ZBTB40Q9NUA8 1239 aa27.95■■■□□ 2.06
PABPN1-207ENST00000556821 PPP2R3BQ9Y5P8 575 aa27.95■■■□□ 2.06
PABPN1-207ENST00000556821 DOCK2Q92608 1830 aa27.95■■■□□ 2.06
PABPN1-207ENST00000556821 PDS5AQ29RF7 1337 aaKnown RBP27.94■■■□□ 2.06
PABPN1-207ENST00000556821 NF2P35240 595 aa27.93■■■□□ 2.06
PABPN1-207ENST00000556821 HABP4Q5JVS0 413 aaKnown RBP27.93■■■□□ 2.06
PABPN1-207ENST00000556821 HHIPL2Q6UWX4 724 aa27.93■■■□□ 2.06
PABPN1-207ENST00000556821 GPR108Q9NPR9 543 aa27.93■■■□□ 2.06
PABPN1-207ENST00000556821 OS9Q13438 667 aaPredicted RBP27.92■■■□□ 2.06
PABPN1-207ENST00000556821 PDE3AQ14432 1141 aa27.92■■■□□ 2.06
PABPN1-207ENST00000556821 RASA3Q14644 834 aa27.92■■■□□ 2.06
PABPN1-207ENST00000556821 TNNI3KQ59H18 835 aa27.92■■■□□ 2.06
PABPN1-207ENST00000556821 APOBEC3HQ6NTF7 200 aaKnown RBP27.92■■■□□ 2.06
PABPN1-207ENST00000556821 FPGT-TNNI3KV9GXZ4 949 aa27.92■■■□□ 2.06
PABPN1-207ENST00000556821 UBE2Q2LH0YL09 131 aa27.91■■■□□ 2.06
PABPN1-207ENST00000556821 TBC1D8O95759 1140 aa27.91■■■□□ 2.06
PABPN1-207ENST00000556821 DIXDC1Q155Q3 683 aa27.91■■■□□ 2.06
PABPN1-207ENST00000556821 FZD1Q9UP38 647 aa27.91■■■□□ 2.06
PABPN1-207ENST00000556821 LDHBP07195 334 aaKnown RBP27.9■■■□□ 2.06
PABPN1-207ENST00000556821 ARID4AP29374 1257 aaPredicted RBP27.9■■■□□ 2.06
PABPN1-207ENST00000556821 TTLL12Q14166 644 aaPredicted RBP27.9■■■□□ 2.06
PABPN1-207ENST00000556821 NBPF12Q5TAG4 269 aaPredicted RBP27.9■■■□□ 2.06
PABPN1-207ENST00000556821 FBXO46Q6PJ61 603 aaPredicted RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms