RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 A0A0A0MRY4 1105 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 SPDYE3A6NKU9 549 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 DEAF1O75398 565 aaPredicted RBP5.5□□□□□ -1.53
SRP54-209ENST00000555746 PAGE1O75459 146 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 BMP6P22004 513 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 RANGAP1P46060 587 aaPredicted RBP5.5□□□□□ -1.53
SRP54-209ENST00000555746 AP3B2Q13367 1082 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 TRAPPC3LQ5T215 181 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 SCARA3Q6AZY7 606 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 TXNDC11Q6PKC3 985 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 FBXO11Q86XK2 927 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 NT5DC4Q86YG4 428 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 FMR1NBQ8N0W7 255 aaPredicted RBP5.5□□□□□ -1.53
SRP54-209ENST00000555746 GALNT11Q8NCW6 608 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 KLHDC7BQ96G42 594 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 TRIM56Q9BRZ2 755 aaKnown RBP5.5□□□□□ -1.53
SRP54-209ENST00000555746 GGT7Q9UJ14 662 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 SAMM50Q9Y512 469 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 LMTK3Q96Q04 1460 aa5.5□□□□□ -1.53
SRP54-209ENST00000555746 DLL1O00548 723 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 ARNTP27540 789 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 CDC25BP30305 580 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 LIG3P49916 1009 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 ZNF157P51786 506 aaPredicted RBP5.49□□□□□ -1.53
SRP54-209ENST00000555746 ZNF252P-AS1Q0IIN9 211 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 SUZ12Q15022 739 aaKnown RBP5.49□□□□□ -1.53
SRP54-209ENST00000555746 AGMOQ6ZNB7 445 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 PDZD3Q86UT5 571 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 SULF2Q8IWU5 870 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 BEND7Q8N7W2 519 aaPredicted RBP5.49□□□□□ -1.53
SRP54-209ENST00000555746 SLC7A3Q8WY07 619 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 PLVAPQ9BX97 442 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 TGIF2Q9GZN2 237 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 NOP53Q9NZM5 478 aaKnown RBP5.49□□□□□ -1.53
SRP54-209ENST00000555746 DDX41Q9UJV9 622 aaKnown RBP5.49□□□□□ -1.53
SRP54-209ENST00000555746 CYP8B1Q9UNU6 501 aa5.49□□□□□ -1.53
SRP54-209ENST00000555746 CYP11A1P05108 521 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 ERCC5P28715 1186 aaPredicted RBP5.48□□□□□ -1.53
SRP54-209ENST00000555746 RAC1P63000 192 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 GSTM4Q03013 218 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 FOXD4L6Q3SYB3 417 aaPredicted RBP5.48□□□□□ -1.53
SRP54-209ENST00000555746 C9orf131Q5VYM1 1079 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 PCNX4Q63HM2 1172 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 TTBK2Q6IQ55 1244 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 FOXD4L3Q6VB84 417 aaPredicted RBP5.48□□□□□ -1.53
SRP54-209ENST00000555746 PODNQ7Z5L7 613 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 USP48Q86UV5 1035 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 RELL1Q8IUW5 271 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 PHC3Q8NDX5 983 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 STK35Q8TDR2 534 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 SCARF2Q96GP6 870 aaPredicted RBP5.48□□□□□ -1.53
SRP54-209ENST00000555746 RHOVQ96L33 236 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 TMEM74Q96NL1 305 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 CARD10Q9BWT7 1032 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 EMILIN2Q9BXX0 1053 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 COPRSQ9NQ92 184 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 KCNQ5Q9NR82 932 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 KBTBD4Q9NVX7 518 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 CACNA2D2Q9NY47 1150 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 CNTNAP5Q8WYK1 1306 aa5.48□□□□□ -1.53
SRP54-209ENST00000555746 ADAM11O75078 769 aa5.47□□□□□ -1.53
SRP54-209ENST00000555746 CD68P34810 354 aaPredicted RBP5.47□□□□□ -1.53
SRP54-209ENST00000555746 RACK1P63244 317 aaKnown RBP5.47□□□□□ -1.53
SRP54-209ENST00000555746 TRIM28Q13263 835 aaKnown RBP5.47□□□□□ -1.53
SRP54-209ENST00000555746 LRRC14Q15048 493 aa5.47□□□□□ -1.53
SRP54-209ENST00000555746 ZNF654Q8IZM8 581 aa5.47□□□□□ -1.53
SRP54-209ENST00000555746 KRT82Q9NSB4 513 aa5.47□□□□□ -1.53
SRP54-209ENST00000555746 GSTP1P09211 210 aaKnown RBP5.46□□□□□ -1.54
SRP54-209ENST00000555746 ELNP15502 786 aa5.46□□□□□ -1.54
SRP54-209ENST00000555746 GARTP22102 1010 aa5.46□□□□□ -1.54
SRP54-209ENST00000555746 GBP2P32456 591 aaPredicted RBP5.46□□□□□ -1.54
SRP54-209ENST00000555746 LMNB2Q03252 620 aa5.46□□□□□ -1.54
SRP54-209ENST00000555746 POU4F3Q15319 338 aa5.46□□□□□ -1.54
SRP54-209ENST00000555746 ZNF394Q53GI3 561 aa5.46□□□□□ -1.54
SRP54-209ENST00000555746 RASIP1Q5U651 963 aa5.46□□□□□ -1.54
SRP54-209ENST00000555746 CCDC84Q86UT8 332 aaPredicted RBP5.46□□□□□ -1.54
SRP54-209ENST00000555746 TRIM42Q8IWZ5 723 aa5.46□□□□□ -1.54
SRP54-209ENST00000555746 C8orf37Q96NL8 207 aa5.46□□□□□ -1.54
SRP54-209ENST00000555746 KCNK4Q9NYG8 393 aa5.46□□□□□ -1.54
SRP54-209ENST00000555746 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.46□□□□□ -1.54
SRP54-209ENST00000555746 LOC100289279A0A1B0GTE1 492 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 TRIM37O94972 964 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 CTSBP07858 339 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 SPATA31C1P0DKV0 1188 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 TFE3P19532 575 aaPredicted RBP5.45□□□□□ -1.54
SRP54-209ENST00000555746 MAOBP27338 520 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 EIF4A3P38919 411 aaKnown RBP5.45□□□□□ -1.54
SRP54-209ENST00000555746 MAP3K11Q16584 847 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 PRRT3Q5FWE3 981 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 LLGL2Q6P1M3 1020 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 IGF2-ASQ6U949 168 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 ALYREFQ86V81 257 aaKnown RBP5.45□□□□□ -1.54
SRP54-209ENST00000555746 GRIN3AQ8TCU5 1115 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 CORO1BQ9BR76 489 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 TLR6Q9Y2C9 796 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 PCDHGB7Q9Y5F8 929 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 SYNGAP1Q96PV0 1343 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 RIMBP3CA6NJZ7 1639 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 RIMBP3BA6NNM3 1639 aa5.45□□□□□ -1.54
SRP54-209ENST00000555746 RIMBP3Q9UFD9 1639 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms