RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
HNRNPC-218ENST00000555215 MANSC4A6NHS7 340 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-218ENST00000555215 MYO1BO43795 1136 aa12.72□□□□□ -0.37
HNRNPC-218ENST00000555215 ZBTB48P10074 688 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-218ENST00000555215 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-218ENST00000555215 CHAF1AQ13111 956 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-218ENST00000555215 SUPT20HL1Q3ZLR7 823 aa12.72□□□□□ -0.37
HNRNPC-218ENST00000555215 FBXO46Q6PJ61 603 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-218ENST00000555215 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
HNRNPC-218ENST00000555215 SERPINA10Q9UK55 444 aa12.72□□□□□ -0.37
HNRNPC-218ENST00000555215 CRHR2Q13324 411 aa12.71□□□□□ -0.37
HNRNPC-218ENST00000555215 PKN2Q16513 984 aaKnown RBP12.71□□□□□ -0.37
HNRNPC-218ENST00000555215 METTL24Q5JXM2 366 aa12.71□□□□□ -0.37
HNRNPC-218ENST00000555215 MKI67P46013 3256 aaKnown RBP12.71□□□□□ -0.38
HNRNPC-218ENST00000555215 CENPFP49454 3210 aa12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 MROH5Q6ZUA9 1318 aa12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 TESPA1A2RU30 521 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 PDE8BO95263 885 aa12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 FGFR2P21802 821 aa12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 IREB2P48200 963 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 OTOP1Q7RTM1 612 aa12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 ANKRD13AQ8IZ07 590 aa12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 BRI3BPQ8WY22 251 aa12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 OPTNQ96CV9 577 aa12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 TRIM17Q9Y577 477 aa12.7□□□□□ -0.38
HNRNPC-218ENST00000555215 OTOFQ9HC10 1997 aa12.69□□□□□ -0.38
HNRNPC-218ENST00000555215 ALDH1A1P00352 501 aa12.69□□□□□ -0.38
HNRNPC-218ENST00000555215 ZEB1P37275 1124 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-218ENST00000555215 INHBEP58166 350 aa12.69□□□□□ -0.38
HNRNPC-218ENST00000555215 VGLL4Q14135 290 aa12.69□□□□□ -0.38
HNRNPC-218ENST00000555215 APOBEC3HQ6NTF7 200 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-218ENST00000555215 ATG9AQ7Z3C6 839 aa12.69□□□□□ -0.38
HNRNPC-218ENST00000555215 CD99L2Q8TCZ2 262 aa12.69□□□□□ -0.38
HNRNPC-218ENST00000555215 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
HNRNPC-218ENST00000555215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.68□□□□□ -0.38
HNRNPC-218ENST00000555215 UNCXA6NJT0 531 aa12.67□□□□□ -0.38
HNRNPC-218ENST00000555215 E9PSI1 815 aa12.67□□□□□ -0.38
HNRNPC-218ENST00000555215 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
HNRNPC-218ENST00000555215 TNFAIP1Q13829 316 aa12.67□□□□□ -0.38
HNRNPC-218ENST00000555215 VPS37DQ86XT2 251 aa12.67□□□□□ -0.38
HNRNPC-218ENST00000555215 FAM43AQ8N2R8 423 aa12.67□□□□□ -0.38
HNRNPC-218ENST00000555215 BRCA2P51587 3418 aa12.67□□□□□ -0.38
HNRNPC-218ENST00000555215 PTPRCP08575 1304 aa12.66□□□□□ -0.38
HNRNPC-218ENST00000555215 EYA2O00167 538 aa12.66□□□□□ -0.38
HNRNPC-218ENST00000555215 HDLBPQ00341 1268 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-218ENST00000555215 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-218ENST00000555215 ZKSCAN4Q969J2 545 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-218ENST00000555215 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
HNRNPC-218ENST00000555215 ZDHHC15Q96MV8 337 aa12.66□□□□□ -0.38
HNRNPC-218ENST00000555215 PTPN22Q9Y2R2 807 aa12.66□□□□□ -0.38
HNRNPC-218ENST00000555215 SNCAIPQ9Y6H5 919 aa12.66□□□□□ -0.38
HNRNPC-218ENST00000555215 LAMB1P07942 1786 aa12.66□□□□□ -0.38
HNRNPC-218ENST00000555215 ARAP2Q8WZ64 1704 aa12.65□□□□□ -0.38
HNRNPC-218ENST00000555215 CCL15-CCL14A0A0B4J2E2 113 aa12.65□□□□□ -0.38
HNRNPC-218ENST00000555215 FRAT2O75474 233 aaPredicted RBP12.65□□□□□ -0.38
HNRNPC-218ENST00000555215 DIXDC1Q155Q3 683 aa12.65□□□□□ -0.38
HNRNPC-218ENST00000555215 CCL15Q16663 113 aa12.65□□□□□ -0.38
HNRNPC-218ENST00000555215 CAVIN4Q5BKX8 364 aa12.65□□□□□ -0.38
HNRNPC-218ENST00000555215 MIGA2Q7L4E1 593 aa12.65□□□□□ -0.38
HNRNPC-218ENST00000555215 TEKT1Q969V4 418 aa12.65□□□□□ -0.38
HNRNPC-218ENST00000555215 SIL1Q9H173 461 aa12.65□□□□□ -0.38
HNRNPC-218ENST00000555215 PA2G4Q9UQ80 394 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-218ENST00000555215 SPDYE5A6NIY4 337 aa12.64□□□□□ -0.39
HNRNPC-218ENST00000555215 SLURP2P0DP57 97 aa12.64□□□□□ -0.39
HNRNPC-218ENST00000555215 SP3Q02447 781 aa12.64□□□□□ -0.39
HNRNPC-218ENST00000555215 NFIAQ12857 509 aa12.64□□□□□ -0.39
HNRNPC-218ENST00000555215 PUM3Q15397 648 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-218ENST00000555215 ZFPM1Q8IX07 1006 aa12.64□□□□□ -0.39
HNRNPC-218ENST00000555215 TBC1D22AQ8WUA7 517 aa12.64□□□□□ -0.39
HNRNPC-218ENST00000555215 MRIQ9BWK5 157 aa12.64□□□□□ -0.39
HNRNPC-218ENST00000555215 EFCC1Q9HA90 598 aa12.64□□□□□ -0.39
HNRNPC-218ENST00000555215 NOB1Q9ULX3 412 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-218ENST00000555215 IRF6O14896 467 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 IFIT1P09914 478 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 PRDX5P30044 214 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 ADORA1P30542 326 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 INPP5BP32019 993 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 TNNI2P48788 182 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 PRPF38BQ5VTL8 546 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 CDC42EP5Q6NZY7 148 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 HHIPL2Q6UWX4 724 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 ERO1AQ96HE7 468 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 WRNIP1Q96S55 665 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 ARHGAP39Q9C0H5 1083 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 SMC4Q9NTJ3 1288 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 DAGLAQ9Y4D2 1042 aa12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-218ENST00000555215 BTBD19C9JJ37 291 aa12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 EN2P19622 333 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 CTGFP29279 349 aa12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 PHKA1P46020 1223 aa12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 GTF2A2P52657 109 aa12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 TCP10Q12799 353 aa12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 TAF1CQ15572 869 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 ALDH1L2Q3SY69 923 aa12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 OTUD7BQ6GQQ9 843 aa12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 FAM83AQ86UY5 434 aa12.62□□□□□ -0.39
HNRNPC-218ENST00000555215 LPIN2Q92539 896 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms