RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 KIAA0100Q14667 2235 aaKnown RBP15.39■□□□□ 0.05
MTHFD1-207ENST00000554677 MANSC4A6NHS7 340 aaPredicted RBP15.39■□□□□ 0.05
MTHFD1-207ENST00000554677 E9PSI1 815 aa15.39■□□□□ 0.05
MTHFD1-207ENST00000554677 IGF2BP3O00425 579 aaKnown RBP eCLIP15.39■□□□□ 0.05
MTHFD1-207ENST00000554677 PDE8BO95263 885 aa15.39■□□□□ 0.05
MTHFD1-207ENST00000554677 ZBTB48P10074 688 aaPredicted RBP15.39■□□□□ 0.05
MTHFD1-207ENST00000554677 INHBEP58166 350 aa15.39■□□□□ 0.05
MTHFD1-207ENST00000554677 CDCA7LQ96GN5 454 aa15.39■□□□□ 0.05
MTHFD1-207ENST00000554677 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.39■□□□□ 0.05
MTHFD1-207ENST00000554677 IQSEC3Q9UPP2 1182 aaPredicted RBP15.39■□□□□ 0.05
MTHFD1-207ENST00000554677 FKTNO75072 461 aa15.38■□□□□ 0.05
MTHFD1-207ENST00000554677 FGFR2P21802 821 aa15.38■□□□□ 0.05
MTHFD1-207ENST00000554677 CRKP46108 304 aa15.38■□□□□ 0.05
MTHFD1-207ENST00000554677 RFX5P48382 616 aaPredicted RBP15.38■□□□□ 0.05
MTHFD1-207ENST00000554677 METTL24Q5JXM2 366 aa15.38■□□□□ 0.05
MTHFD1-207ENST00000554677 TRMT2AQ8IZ69 625 aaKnown RBP15.38■□□□□ 0.05
MTHFD1-207ENST00000554677 ALDH1A1P00352 501 aa15.37■□□□□ 0.05
MTHFD1-207ENST00000554677 IREB2P48200 963 aaKnown RBP15.37■□□□□ 0.05
MTHFD1-207ENST00000554677 BCAMP50895 628 aa15.37■□□□□ 0.05
MTHFD1-207ENST00000554677 PTPN18Q99952 460 aa15.37■□□□□ 0.05
MTHFD1-207ENST00000554677 MYH13Q9UKX3 1938 aa15.37■□□□□ 0.05
MTHFD1-207ENST00000554677 MKI67P46013 3256 aaKnown RBP15.37■□□□□ 0.05
MTHFD1-207ENST00000554677 TESPA1A2RU30 521 aaPredicted RBP15.36■□□□□ 0.05
MTHFD1-207ENST00000554677 TCP10L2B9ZVM9 353 aa15.36■□□□□ 0.05
MTHFD1-207ENST00000554677 HDLBPQ00341 1268 aaKnown RBP15.36■□□□□ 0.05
MTHFD1-207ENST00000554677 CHAF1AQ13111 956 aaPredicted RBP15.36■□□□□ 0.05
MTHFD1-207ENST00000554677 FBXO46Q6PJ61 603 aaPredicted RBP15.36■□□□□ 0.05
MTHFD1-207ENST00000554677 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.36■□□□□ 0.05
MTHFD1-207ENST00000554677 ANKRD13AQ8IZ07 590 aa15.36■□□□□ 0.05
MTHFD1-207ENST00000554677 MRIQ9BWK5 157 aa15.36■□□□□ 0.05
MTHFD1-207ENST00000554677 TMEM39BQ9GZU3 492 aa15.36■□□□□ 0.05
MTHFD1-207ENST00000554677 TNFAIP1Q13829 316 aa15.35■□□□□ 0.05
MTHFD1-207ENST00000554677 ALDH1L2Q3SY69 923 aa15.35■□□□□ 0.05
MTHFD1-207ENST00000554677 VPS37DQ86XT2 251 aa15.35■□□□□ 0.05
MTHFD1-207ENST00000554677 MS4A4AQ96JQ5 239 aa15.35■□□□□ 0.05
MTHFD1-207ENST00000554677 NPM3O75607 178 aaKnown RBP15.34■□□□□ 0.05
MTHFD1-207ENST00000554677 CAP1Q01518 475 aa15.34■□□□□ 0.05
MTHFD1-207ENST00000554677 CAVIN4Q5BKX8 364 aa15.34■□□□□ 0.05
MTHFD1-207ENST00000554677 APOBEC3HQ6NTF7 200 aaKnown RBP15.34■□□□□ 0.05
MTHFD1-207ENST00000554677 ATG9AQ7Z3C6 839 aa15.34■□□□□ 0.05
MTHFD1-207ENST00000554677 TBC1D22AQ8WUA7 517 aa15.34■□□□□ 0.05
MTHFD1-207ENST00000554677 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
MTHFD1-207ENST00000554677 ELP3Q9H9T3 547 aa15.34■□□□□ 0.05
MTHFD1-207ENST00000554677 EYA2O00167 538 aa15.33■□□□□ 0.04
MTHFD1-207ENST00000554677 SLC34A2O95436 690 aa15.33■□□□□ 0.04
MTHFD1-207ENST00000554677 CACNB3P54284 484 aa15.33■□□□□ 0.04
MTHFD1-207ENST00000554677 MAP3K9P80192 1104 aa15.33■□□□□ 0.04
MTHFD1-207ENST00000554677 OPTNQ96CV9 577 aa15.33■□□□□ 0.04
MTHFD1-207ENST00000554677 ZDHHC15Q96MV8 337 aa15.33■□□□□ 0.04
MTHFD1-207ENST00000554677 KIF16BQ96L93 1317 aa15.33■□□□□ 0.04
MTHFD1-207ENST00000554677 AK9Q5TCS8 1911 aa15.33■□□□□ 0.04
MTHFD1-207ENST00000554677 CRHR2Q13324 411 aa15.32■□□□□ 0.04
MTHFD1-207ENST00000554677 PUM3Q15397 648 aaKnown RBP15.32■□□□□ 0.04
MTHFD1-207ENST00000554677 OTOP1Q7RTM1 612 aa15.32■□□□□ 0.04
MTHFD1-207ENST00000554677 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.32■□□□□ 0.04
MTHFD1-207ENST00000554677 TEKT1Q969V4 418 aa15.32■□□□□ 0.04
MTHFD1-207ENST00000554677 BRCA2P51587 3418 aa15.31■□□□□ 0.04
MTHFD1-207ENST00000554677 FRAT2O75474 233 aaPredicted RBP15.31■□□□□ 0.04
MTHFD1-207ENST00000554677 IFIT1P09914 478 aaKnown RBP15.31■□□□□ 0.04
MTHFD1-207ENST00000554677 TNNI2P48788 182 aa15.31■□□□□ 0.04
MTHFD1-207ENST00000554677 VGLL4Q14135 290 aa15.31■□□□□ 0.04
MTHFD1-207ENST00000554677 BRI3BPQ8WY22 251 aa15.31■□□□□ 0.04
MTHFD1-207ENST00000554677 SMC4Q9NTJ3 1288 aa15.31■□□□□ 0.04
MTHFD1-207ENST00000554677 SUGT1Q9Y2Z0 365 aa15.31■□□□□ 0.04
MTHFD1-207ENST00000554677 FKBP1CQ5VVH2 108 aa15.3■□□□□ 0.04
MTHFD1-207ENST00000554677 HHIPL2Q6UWX4 724 aa15.3■□□□□ 0.04
MTHFD1-207ENST00000554677 FAM83AQ86UY5 434 aa15.3■□□□□ 0.04
MTHFD1-207ENST00000554677 LPIN2Q92539 896 aa15.3■□□□□ 0.04
MTHFD1-207ENST00000554677 NOB1Q9ULX3 412 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-207ENST00000554677 TRIM17Q9Y577 477 aa15.3■□□□□ 0.04
MTHFD1-207ENST00000554677 OTUD7BQ6GQQ9 843 aa15.29■□□□□ 0.04
MTHFD1-207ENST00000554677 CD99L2Q8TCZ2 262 aa15.29■□□□□ 0.04
MTHFD1-207ENST00000554677 SNCAIPQ9Y6H5 919 aa15.29■□□□□ 0.04
MTHFD1-207ENST00000554677 MYH2Q9UKX2 1941 aa15.29■□□□□ 0.04
MTHFD1-207ENST00000554677 CIAO1O76071 339 aa15.28■□□□□ 0.04
MTHFD1-207ENST00000554677 SLC5A1P13866 664 aa15.28■□□□□ 0.04
MTHFD1-207ENST00000554677 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
MTHFD1-207ENST00000554677 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
MTHFD1-207ENST00000554677 PTPN22Q9Y2R2 807 aa15.28■□□□□ 0.04
MTHFD1-207ENST00000554677 SPDYE5A6NIY4 337 aa15.27■□□□□ 0.04
MTHFD1-207ENST00000554677 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-207ENST00000554677 UBTFL1P0CB47 393 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-207ENST00000554677 GTF2A2P52657 109 aa15.27■□□□□ 0.04
MTHFD1-207ENST00000554677 SP3Q02447 781 aa15.27■□□□□ 0.04
MTHFD1-207ENST00000554677 FAM43AQ8N2R8 423 aa15.27■□□□□ 0.04
MTHFD1-207ENST00000554677 ZKSCAN4Q969J2 545 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-207ENST00000554677 ERO1AQ96HE7 468 aa15.27■□□□□ 0.04
MTHFD1-207ENST00000554677 SIL1Q9H173 461 aa15.27■□□□□ 0.04
MTHFD1-207ENST00000554677 PA2G4Q9UQ80 394 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-207ENST00000554677 MAST3O60307 1309 aa15.26■□□□□ 0.03
MTHFD1-207ENST00000554677 CCL15-CCL14A0A0B4J2E2 113 aa15.26■□□□□ 0.03
MTHFD1-207ENST00000554677 PRDX5P30044 214 aa15.26■□□□□ 0.03
MTHFD1-207ENST00000554677 CCL15Q16663 113 aa15.26■□□□□ 0.03
MTHFD1-207ENST00000554677 ATP2B3Q16720 1220 aa15.26■□□□□ 0.03
MTHFD1-207ENST00000554677 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
MTHFD1-207ENST00000554677 CEP126Q9P2H0 1117 aa15.26■□□□□ 0.03
MTHFD1-207ENST00000554677 DAGLAQ9Y4D2 1042 aa15.26■□□□□ 0.03
MTHFD1-207ENST00000554677 CSADQ9Y600 493 aa15.26■□□□□ 0.03
MTHFD1-207ENST00000554677 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
MTHFD1-207ENST00000554677 ZSWIM8A7E2V4 1837 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms