RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PCDHAC2Q9Y5I4 1007 aa8.28□□□□□ -1.08
SLIRP-203ENST00000554074 CLRN2A0PK11 232 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 MANSC4A6NHS7 340 aaPredicted RBP8.27□□□□□ -1.09
SLIRP-203ENST00000554074 CCDC85CA6NKD9 419 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 EYA2O00167 538 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 CIAO1O76071 339 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 ALDH1A1P00352 501 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 IFIT1P09914 478 aaKnown RBP8.27□□□□□ -1.09
SLIRP-203ENST00000554074 FGFR2P21802 821 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 RBM5P52756 815 aaKnown RBP eCLIP8.27□□□□□ -1.09
SLIRP-203ENST00000554074 RASA3Q14644 834 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 CTU1Q7Z7A3 348 aaKnown RBP8.27□□□□□ -1.09
SLIRP-203ENST00000554074 DZIP1LQ8IYY4 767 aaKnown RBP8.27□□□□□ -1.09
SLIRP-203ENST00000554074 ARHGAP45Q92619 1136 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 VEZTQ9HBM0 779 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 ZNF70Q9UC06 446 aaPredicted RBP8.27□□□□□ -1.09
SLIRP-203ENST00000554074 JAG2Q9Y219 1238 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 RBBP6Q7Z6E9 1792 aaKnown RBP8.27□□□□□ -1.09
SLIRP-203ENST00000554074 MAST3O60307 1309 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 AOX1Q06278 1338 aa8.27□□□□□ -1.09
SLIRP-203ENST00000554074 USP2O75604 605 aaPredicted RBP8.26□□□□□ -1.09
SLIRP-203ENST00000554074 UBTFL1P0CB47 393 aaPredicted RBP8.26□□□□□ -1.09
SLIRP-203ENST00000554074 SLC5A1P13866 664 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 CRKP46108 304 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 IREB2P48200 963 aaKnown RBP8.26□□□□□ -1.09
SLIRP-203ENST00000554074 TNNI2P48788 182 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 PKN2Q16513 984 aaKnown RBP8.26□□□□□ -1.09
SLIRP-203ENST00000554074 NBPF12Q5TAG4 269 aaPredicted RBP8.26□□□□□ -1.09
SLIRP-203ENST00000554074 FKBP1CQ5VVH2 108 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 ANKRD13AQ8IZ07 590 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 KLHDC4Q8TBB5 520 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 LPIN2Q92539 896 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 TEKT1Q969V4 418 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 SLC10A4Q96EP9 437 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 WNK4Q96J92 1243 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 ZDHHC15Q96MV8 337 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 NOB1Q9ULX3 412 aaKnown RBP8.26□□□□□ -1.09
SLIRP-203ENST00000554074 DOCK2Q92608 1830 aa8.26□□□□□ -1.09
SLIRP-203ENST00000554074 TNRC18O15417 2968 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-203ENST00000554074 RPAP1Q9BWH6 1393 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-203ENST00000554074 GPR25O00155 361 aa8.25□□□□□ -1.09
SLIRP-203ENST00000554074 FRAT2O75474 233 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-203ENST00000554074 RARSP54136 660 aaKnown RBP8.25□□□□□ -1.09
SLIRP-203ENST00000554074 PRKG1Q13976 671 aa8.25□□□□□ -1.09
SLIRP-203ENST00000554074 INTS3Q68E01 1043 aaKnown RBP8.25□□□□□ -1.09
SLIRP-203ENST00000554074 HHIPL2Q6UWX4 724 aa8.25□□□□□ -1.09
SLIRP-203ENST00000554074 ATG9AQ7Z3C6 839 aa8.25□□□□□ -1.09
SLIRP-203ENST00000554074 FAM83AQ86UY5 434 aa8.25□□□□□ -1.09
SLIRP-203ENST00000554074 WDR66Q8TBY9 1149 aa8.25□□□□□ -1.09
SLIRP-203ENST00000554074 TEPSINQ96N21 525 aa8.25□□□□□ -1.09
SLIRP-203ENST00000554074 TDRD3Q9H7E2 651 aaKnown RBP8.25□□□□□ -1.09
SLIRP-203ENST00000554074 COPRSQ9NQ92 184 aa8.25□□□□□ -1.09
SLIRP-203ENST00000554074 TESPA1A2RU30 521 aaPredicted RBP8.24□□□□□ -1.09
SLIRP-203ENST00000554074 SEMA3EO15041 775 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 TBC1D8O95759 1140 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 BCAMP50895 628 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 MLLT1Q03111 559 aaPredicted RBP8.24□□□□□ -1.09
SLIRP-203ENST00000554074 MKRN3Q13064 507 aaKnown RBP8.24□□□□□ -1.09
SLIRP-203ENST00000554074 CHAF1AQ13111 956 aaPredicted RBP8.24□□□□□ -1.09
SLIRP-203ENST00000554074 MTX1Q13505 466 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 GRIK5Q16478 980 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 IFNL1Q8IU54 200 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 ZNF296Q8WUU4 475 aaPredicted RBP8.24□□□□□ -1.09
SLIRP-203ENST00000554074 HOOK2Q96ED9 719 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 CLMNQ96JQ2 1002 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 TMOD2Q9NZR1 351 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 CEP126Q9P2H0 1117 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 FZD1Q9UP38 647 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 IQSEC3Q9UPP2 1182 aaPredicted RBP8.24□□□□□ -1.09
SLIRP-203ENST00000554074 PTPRFP10586 1907 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 SALL1Q9NSC2 1324 aa8.24□□□□□ -1.09
SLIRP-203ENST00000554074 KIAA0100Q14667 2235 aaKnown RBP8.23□□□□□ -1.09
SLIRP-203ENST00000554074 IPO8O15397 1037 aaKnown RBP8.23□□□□□ -1.09
SLIRP-203ENST00000554074 FKTNO75072 461 aa8.23□□□□□ -1.09
SLIRP-203ENST00000554074 GNAI3P08754 354 aa8.23□□□□□ -1.09
SLIRP-203ENST00000554074 IL15P40933 162 aaPredicted RBP8.23□□□□□ -1.09
SLIRP-203ENST00000554074 MAP3K9P80192 1104 aa8.23□□□□□ -1.09
SLIRP-203ENST00000554074 ATP2B3Q16720 1220 aa8.23□□□□□ -1.09
SLIRP-203ENST00000554074 OTUD7BQ6GQQ9 843 aa8.23□□□□□ -1.09
SLIRP-203ENST00000554074 APOBEC3HQ6NTF7 200 aaKnown RBP8.23□□□□□ -1.09
SLIRP-203ENST00000554074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.23□□□□□ -1.098e-11■■■□□ 17
SLIRP-203ENST00000554074 TMEM39BQ9GZU3 492 aa8.23□□□□□ -1.09
SLIRP-203ENST00000554074 GNL3LQ9NVN8 582 aaKnown RBP8.23□□□□□ -1.09
SLIRP-203ENST00000554074 LRRFIP2Q9Y608 721 aaKnown RBP8.23□□□□□ -1.09
SLIRP-203ENST00000554074 PDS5AQ29RF7 1337 aaKnown RBP8.23□□□□□ -1.09
SLIRP-203ENST00000554074 MGAMO43451 1857 aa8.22□□□□□ -1.09
SLIRP-203ENST00000554074 CDK5RAP2Q96SN8 1893 aa8.22□□□□□ -1.09
SLIRP-203ENST00000554074 TCP10L2B9ZVM9 353 aa8.22□□□□□ -1.09
SLIRP-203ENST00000554074 IGF2BP3O00425 579 aaKnown RBP eCLIP8.22□□□□□ -1.09
SLIRP-203ENST00000554074 GJA5P36382 358 aa8.22□□□□□ -1.09
SLIRP-203ENST00000554074 FBXO46Q6PJ61 603 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-203ENST00000554074 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-203ENST00000554074 ZGPATQ8N5A5 531 aaKnown RBP8.22□□□□□ -1.09
SLIRP-203ENST00000554074 MEIS3Q99687 375 aa8.22□□□□□ -1.09
SLIRP-203ENST00000554074 DENND2AQ9ULE3 1009 aa8.22□□□□□ -1.09
SLIRP-203ENST00000554074 HPS5Q9UPZ3 1129 aa8.22□□□□□ -1.09
SLIRP-203ENST00000554074 FOCADQ5VW36 1801 aa8.22□□□□□ -1.09
SLIRP-203ENST00000554074 PHIPQ8WWQ0 1821 aa8.22□□□□□ -1.09
SLIRP-203ENST00000554074 DOCK1Q14185 1865 aa8.21□□□□□ -1.09
SLIRP-203ENST00000554074 MYO5AQ9Y4I1 1855 aaKnown RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms