RNA–Protein interactions for RNA: ENST00000553020.5

CNOT2-242, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-242ENST00000553020 BRPF3Q9ULD4 1205 aa12.04□□□□□ -0.48
CNOT2-242ENST00000553020 XRCC6P12956 609 aaKnown RBP eCLIP12.03□□□□□ -0.48
CNOT2-242ENST00000553020 FOXD4L6Q3SYB3 417 aaPredicted RBP12.03□□□□□ -0.48
CNOT2-242ENST00000553020 LRSAM1Q6UWE0 723 aa12.03□□□□□ -0.48
CNOT2-242ENST00000553020 FOXD4L3Q6VB84 417 aaPredicted RBP12.03□□□□□ -0.48
CNOT2-242ENST00000553020 USP48Q86UV5 1035 aa12.03□□□□□ -0.48
CNOT2-242ENST00000553020 VPS37DQ86XT2 251 aa12.03□□□□□ -0.48
CNOT2-242ENST00000553020 SPATA5Q8NB90 893 aa12.03□□□□□ -0.48
CNOT2-242ENST00000553020 OSBP2Q969R2 916 aa12.03□□□□□ -0.48
CNOT2-242ENST00000553020 SCAND2PQ9GZW5 306 aaPredicted RBP12.03□□□□□ -0.48
CNOT2-242ENST00000553020 TSPY26PQ9H489 355 aa12.03□□□□□ -0.48
CNOT2-242ENST00000553020 MTMR6Q9Y217 621 aa12.03□□□□□ -0.48
CNOT2-242ENST00000553020 RTCBQ9Y3I0 505 aaKnown RBP12.03□□□□□ -0.48
CNOT2-242ENST00000553020 MYH7P12883 1935 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 CPLX1O14810 134 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 PFKFB2O60825 505 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 CDKL5O76039 1030 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 FGFR2P21802 821 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 PHKA1P46020 1223 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 GPT2Q8TD30 523 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 ZNF274Q96GC6 653 aaPredicted RBP12.02□□□□□ -0.49
CNOT2-242ENST00000553020 SETDB2Q96T68 719 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.49
CNOT2-242ENST00000553020 CFAP45Q9UL16 551 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 ZMYM6O95789 1325 aa12.02□□□□□ -0.49
CNOT2-242ENST00000553020 DDX60Q8IY21 1712 aaKnown RBP12.02□□□□□ -0.49
CNOT2-242ENST00000553020 GNPATO15228 680 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 HSPA8P11142 646 aaKnown RBP12.01□□□□□ -0.49
CNOT2-242ENST00000553020 PDE6AP16499 860 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 NBPF5PQ86XG9 351 aaPredicted RBP12.01□□□□□ -0.49
CNOT2-242ENST00000553020 MPNDQ8N594 471 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 ZNF396Q96N95 335 aaPredicted RBP12.01□□□□□ -0.49
CNOT2-242ENST00000553020 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 NAPBQ9H115 298 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 CNNM2Q9H8M5 875 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 CNPY2Q9Y2B0 182 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 ZNF532Q9HCE3 1301 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 CARMIL3Q8ND23 1372 aa12.01□□□□□ -0.49
CNOT2-242ENST00000553020 PTPDC1A2A3K4 754 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 GOLGA8BA8MQT2 603 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 PRC1O43663 620 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 CHRNDQ07001 517 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 UBE4AQ14139 1066 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 SCARF1Q14162 830 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 SART3Q15020 963 aaKnown RBP12□□□□□ -0.49
CNOT2-242ENST00000553020 SF3B3Q15393 1217 aaKnown RBP12□□□□□ -0.49
CNOT2-242ENST00000553020 ATL3Q6DD88 541 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 NAA16Q6N069 864 aaPredicted RBP12□□□□□ -0.49
CNOT2-242ENST00000553020 SYNE3Q6ZMZ3 975 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 FAM43AQ8N2R8 423 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 FBXL16Q8N461 479 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 ANKRD2Q9GZV1 360 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 RNF41Q9H4P4 317 aaPredicted RBP12□□□□□ -0.49
CNOT2-242ENST00000553020 LRP2BPQ9P2M1 347 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 NARFQ9UHQ1 456 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 CD2APQ9Y5K6 639 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 ELP1O95163 1332 aa12□□□□□ -0.49
CNOT2-242ENST00000553020 ERICH2A1L162 156 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 SYCE3A1L190 88 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 SEMA3EO15041 775 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 TDO2P48775 406 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 DNM1Q05193 864 aaKnown RBP11.99□□□□□ -0.49
CNOT2-242ENST00000553020 APOBRQ0VD83 1088 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 TMED8Q6PL24 325 aaPredicted RBP11.99□□□□□ -0.49
CNOT2-242ENST00000553020 TPTE2Q6XPS3 522 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 BICDL1Q6ZP65 573 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 STOX1Q6ZVD7 989 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 CDC37L1Q7L3B6 337 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
CNOT2-242ENST00000553020 TMEM87BQ96K49 555 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 SPATA32Q96LK8 384 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 AGXT2Q9BYV1 514 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 KRT23Q9C075 422 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 PUS7LQ9H0K6 701 aaKnown RBP11.99□□□□□ -0.49
CNOT2-242ENST00000553020 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 PIH1D3Q9NQM4 214 aaKnown RBP11.99□□□□□ -0.49
CNOT2-242ENST00000553020 BSDC1Q9NW68 430 aaPredicted RBP11.99□□□□□ -0.49
CNOT2-242ENST00000553020 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
CNOT2-242ENST00000553020 DENND2AQ9ULE3 1009 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 C10orf71Q711Q0 1435 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 A0A0C4DFX4 3053 aa11.99□□□□□ -0.49
CNOT2-242ENST00000553020 PNPLA7Q6ZV29 1317 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 FGAP02671 866 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 ADRA2BP18089 450 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 RFC4P35249 363 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 HAND2P61296 217 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 EXOSC10Q01780 885 aaKnown RBP11.98□□□□□ -0.49
CNOT2-242ENST00000553020 ST3GAL1Q11201 340 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 SCRN1Q12765 414 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 RASGRF1Q13972 1273 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 ALX1Q15699 326 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 PI16Q6UXB8 463 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 NFXL1Q6ZNB6 911 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 LRRC2Q9BYS8 371 aa11.98□□□□□ -0.49
CNOT2-242ENST00000553020 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 1591.9 ms