RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 PUS3Q9BZE2 481 aaKnown RBP14.35□□□□□ -0.11
HDAC7-230ENST00000552960 PCDHA7Q9UN72 937 aa14.35□□□□□ -0.11
HDAC7-230ENST00000552960 COL15A1P39059 1388 aa14.35□□□□□ -0.11
HDAC7-230ENST00000552960 MED23Q9ULK4 1368 aa14.35□□□□□ -0.11
HDAC7-230ENST00000552960 NRDCO43847 1150 aa14.35□□□□□ -0.11
HDAC7-230ENST00000552960 STARD3NLO95772 234 aa14.35□□□□□ -0.11
HDAC7-230ENST00000552960 ADD1P35611 737 aaKnown RBP14.35□□□□□ -0.11
HDAC7-230ENST00000552960 ITPK1Q13572 414 aa14.35□□□□□ -0.11
HDAC7-230ENST00000552960 MCMDC2Q4G0Z9 681 aa14.35□□□□□ -0.11
HDAC7-230ENST00000552960 LRRC24Q50LG9 513 aa14.35□□□□□ -0.11
HDAC7-230ENST00000552960 HSP90AA4PQ58FG1 418 aa14.35□□□□□ -0.11
HDAC7-230ENST00000552960 DNAI1Q9UI46 699 aa14.35□□□□□ -0.11
HDAC7-230ENST00000552960 NDUFA8P51970 172 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 MRPS27Q92552 414 aaKnown RBP14.34□□□□□ -0.11
HDAC7-230ENST00000552960 GJB4Q9NTQ9 266 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 LAMB4A4D0S4 1761 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 BCL9LQ86UU0 1499 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 ATP6V1AP38606 617 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 GOLGA8FQ08AF8 430 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 GOLGA8DPQ0D2H9 430 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 GPHNQ9NQX3 736 aaPredicted RBP14.34□□□□□ -0.11
HDAC7-230ENST00000552960 SLIT2O94813 1529 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
HDAC7-230ENST00000552960 CCDC66A2RUB6 948 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 CTDNEP1O95476 244 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 GSDMDP57764 484 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 HAND2P61296 217 aa14.34□□□□□ -0.11
HDAC7-230ENST00000552960 RABL6Q3YEC7 729 aaPredicted RBP14.34□□□□□ -0.11
HDAC7-230ENST00000552960 E4F1Q66K89 784 aaPredicted RBP14.34□□□□□ -0.11
HDAC7-230ENST00000552960 DHX32Q7L7V1 743 aaKnown RBP14.34□□□□□ -0.11
HDAC7-230ENST00000552960 TCIRG1Q13488 830 aa14.33□□□□□ -0.12
HDAC7-230ENST00000552960 TNNI3KQ59H18 835 aa14.33□□□□□ -0.12
HDAC7-230ENST00000552960 PPP1R13BQ96KQ4 1090 aa14.33□□□□□ -0.12
HDAC7-230ENST00000552960 NOL10Q9BSC4 688 aaKnown RBP14.33□□□□□ -0.12
HDAC7-230ENST00000552960 FPGT-TNNI3KV9GXZ4 949 aa14.33□□□□□ -0.12
HDAC7-230ENST00000552960 URI1O94763 535 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-230ENST00000552960 ZNF446Q9NWS9 450 aa14.33□□□□□ -0.12
HDAC7-230ENST00000552960 NRAPQ86VF7 1730 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 PFKFB2O60825 505 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 NBPF11Q86T75 865 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 MNS1Q8NEH6 495 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 CLIC4Q9Y696 253 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 HSPA1LP34931 641 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 TIMM10P62072 90 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 GNL2Q13823 731 aaKnown RBP14.32□□□□□ -0.12
HDAC7-230ENST00000552960 TTLL5Q6EMB2 1281 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 ARMCX5Q6P1M9 558 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 UBXN4Q92575 508 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 ISCA1Q9BUE6 129 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 LRP6O75581 1613 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 DOT1LQ8TEK3 1739 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 SLC3A2P08195 630 aaKnown RBP14.32□□□□□ -0.12
HDAC7-230ENST00000552960 MARCKSP29966 332 aaPredicted RBP14.32□□□□□ -0.12
HDAC7-230ENST00000552960 BMS1Q14692 1282 aaKnown RBP14.32□□□□□ -0.12
HDAC7-230ENST00000552960 TAF3Q5VWG9 929 aa14.32□□□□□ -0.12
HDAC7-230ENST00000552960 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.32□□□□□ -0.12
HDAC7-230ENST00000552960 LOC102724428A0A0B4J2F2 783 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 ATP5JP18859 108 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 CLCN6P51797 869 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 SIK1P57059 783 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 TPM4P67936 248 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 TSGA10IPQ3SY00 556 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 INTS5Q6P9B9 1019 aaKnown RBP14.31□□□□□ -0.12
HDAC7-230ENST00000552960 KIF6Q6ZMV9 814 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 ENGASEQ8NFI3 743 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 ALDH8A1Q9H2A2 487 aaPredicted RBP14.31□□□□□ -0.12
HDAC7-230ENST00000552960 EPC1Q9H2F5 836 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 ZNF609O15014 1411 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 SERPINC1P01008 464 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 ATP1A3P13637 1013 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 IRX5P78411 483 aaPredicted RBP14.31□□□□□ -0.12
HDAC7-230ENST00000552960 USPL1Q5W0Q7 1092 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 NAA16Q6N069 864 aaPredicted RBP14.31□□□□□ -0.12
HDAC7-230ENST00000552960 SYNE3Q6ZMZ3 975 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 ATG9AQ7Z3C6 839 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 CCDC191Q8NCU4 936 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 COPRSQ9NQ92 184 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 KIAA1468Q9P260 1216 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 USP21Q9UK80 565 aa14.31□□□□□ -0.12
HDAC7-230ENST00000552960 MAP3K15Q6ZN16 1313 aa14.3□□□□□ -0.12
HDAC7-230ENST00000552960 CRKLP46109 303 aaKnown RBP14.3□□□□□ -0.12
HDAC7-230ENST00000552960 DZIP3Q86Y13 1208 aaKnown RBP14.3□□□□□ -0.12
HDAC7-230ENST00000552960 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
HDAC7-230ENST00000552960 THRAP3Q9Y2W1 955 aaKnown RBP14.3□□□□□ -0.12
HDAC7-230ENST00000552960 KIF2AO00139 706 aaPredicted RBP14.3□□□□□ -0.12
HDAC7-230ENST00000552960 CFAP100Q494V2 611 aa14.3□□□□□ -0.12
HDAC7-230ENST00000552960 STK11IPQ8N1F8 1099 aa14.3□□□□□ -0.12
HDAC7-230ENST00000552960 UBN2Q6ZU65 1347 aa14.3□□□□□ -0.12
HDAC7-230ENST00000552960 GIGYF2Q6Y7W6 1299 aaKnown RBP14.3□□□□□ -0.12
HDAC7-230ENST00000552960 C8orf76Q96K31 380 aa14.3□□□□□ -0.12
HDAC7-230ENST00000552960 UTP14AQ9BVJ6 771 aaKnown RBP14.3□□□□□ -0.12
HDAC7-230ENST00000552960 NUP188Q5SRE5 1749 aa14.29□□□□□ -0.12
HDAC7-230ENST00000552960 E7EWF7 191 aa14.29□□□□□ -0.12
HDAC7-230ENST00000552960 CPLX1O14810 134 aa14.29□□□□□ -0.12
HDAC7-230ENST00000552960 SEC31AO94979 1220 aaKnown RBP14.29□□□□□ -0.12
HDAC7-230ENST00000552960 HSP90AB3PQ58FF7 597 aa14.29□□□□□ -0.12
HDAC7-230ENST00000552960 FMR1NBQ8N0W7 255 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-230ENST00000552960 TIGD1Q96MW7 591 aa14.29□□□□□ -0.12
HDAC7-230ENST00000552960 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.29□□□□□ -0.128e-7■■■□□ 17.2
HDAC7-230ENST00000552960 PDIA3P30101 505 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms