RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 DLEC1Q9Y238 1755 aa23.3■■□□□ 1.32
MTA1-220ENST00000552286 IRS2Q9Y4H2 1338 aa23.3■■□□□ 1.32
MTA1-220ENST00000552286 SYT1P21579 422 aa23.3■■□□□ 1.32
MTA1-220ENST00000552286 TTF1Q15361 905 aaPredicted RBP23.3■■□□□ 1.32
MTA1-220ENST00000552286 TXNRD3Q86VQ6 643 aa23.3■■□□□ 1.32
MTA1-220ENST00000552286 NECAB1Q8N987 351 aa23.3■■□□□ 1.32
MTA1-220ENST00000552286 POLD1P28340 1107 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 HIBADHP31937 336 aaKnown RBP23.29■■□□□ 1.32
MTA1-220ENST00000552286 WASHC4Q2M389 1173 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 FBXO33Q7Z6M2 555 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 APPBP2Q92624 585 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 GPR101Q96P66 508 aaPredicted RBP23.29■■□□□ 1.32
MTA1-220ENST00000552286 PODXL2Q9NZ53 605 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 SLX4Q8IY92 1834 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 KIF13BQ9NQT8 1826 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 DOCK2Q92608 1830 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 STX6O43752 255 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 ATP2B4P23634 1241 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 GJB2P29033 226 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 OLFM4Q6UX06 510 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 STOX1Q6ZVD7 989 aa23.29■■□□□ 1.32
MTA1-220ENST00000552286 COL1A1P02452 1464 aaPredicted RBP23.28■■□□□ 1.32
MTA1-220ENST00000552286 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.28■■□□□ 1.321e-7■■■■□ 19.5
MTA1-220ENST00000552286 PIH1D3Q9NQM4 214 aaKnown RBP23.28■■□□□ 1.32
MTA1-220ENST00000552286 HMGB1P09429 215 aaKnown RBP23.27■■□□□ 1.32
MTA1-220ENST00000552286 TBC1D16Q8TBP0 767 aa23.27■■□□□ 1.32
MTA1-220ENST00000552286 CNKSR1Q969H4 720 aa23.27■■□□□ 1.32
MTA1-220ENST00000552286 TMX4Q9H1E5 349 aaPredicted RBP23.27■■□□□ 1.32
MTA1-220ENST00000552286 ZSCAN22P10073 491 aaPredicted RBP23.27■■□□□ 1.32
MTA1-220ENST00000552286 POLLQ9UGP5 575 aa23.27■■□□□ 1.32
MTA1-220ENST00000552286 IDH1O75874 414 aaKnown RBP23.26■■□□□ 1.31
MTA1-220ENST00000552286 ZSCAN25Q6NSZ9 544 aa23.26■■□□□ 1.31
MTA1-220ENST00000552286 PUS7LQ9H0K6 701 aaKnown RBP23.26■■□□□ 1.31
MTA1-220ENST00000552286 ISY1Q9ULR0 285 aaKnown RBP23.26■■□□□ 1.31
MTA1-220ENST00000552286 DUOX1Q9NRD9 1551 aa23.26■■□□□ 1.31
MTA1-220ENST00000552286 C6orf229H3BNL8 230 aa23.25■■□□□ 1.31
MTA1-220ENST00000552286 Q6ZUG5 572 aa23.25■■□□□ 1.31
MTA1-220ENST00000552286 DENND2AQ9ULE3 1009 aa23.25■■□□□ 1.31
MTA1-220ENST00000552286 FOXP2O15409 715 aa23.25■■□□□ 1.31
MTA1-220ENST00000552286 ADD2P35612 726 aa23.25■■□□□ 1.31
MTA1-220ENST00000552286 C15orf52Q6ZUT6 534 aaKnown RBP23.25■■□□□ 1.31
MTA1-220ENST00000552286 A0A0G2JLW4 131 aa23.24■■□□□ 1.31
MTA1-220ENST00000552286 SEMA3EO15041 775 aa23.24■■□□□ 1.31
MTA1-220ENST00000552286 DPP8Q6V1X1 898 aaPredicted RBP23.24■■□□□ 1.31
MTA1-220ENST00000552286 DHX32Q7L7V1 743 aaKnown RBP23.24■■□□□ 1.31
MTA1-220ENST00000552286 ZNF804AQ7Z570 1209 aa23.24■■□□□ 1.31
MTA1-220ENST00000552286 MPNDQ8N594 471 aa23.24■■□□□ 1.31
MTA1-220ENST00000552286 CTNNA3Q9UI47 895 aa23.24■■□□□ 1.31
MTA1-220ENST00000552286 E7EWF7 191 aa23.23■■□□□ 1.31
MTA1-220ENST00000552286 GPT2Q8TD30 523 aa23.23■■□□□ 1.31
MTA1-220ENST00000552286 ZNF219Q9P2Y4 722 aaPredicted RBP23.23■■□□□ 1.31
MTA1-220ENST00000552286 NCLP19338 710 aaKnown RBP23.23■■□□□ 1.31
MTA1-220ENST00000552286 SLC9C2Q5TAH2 1124 aa23.23■■□□□ 1.31
MTA1-220ENST00000552286 TTLL5Q6EMB2 1281 aa23.23■■□□□ 1.31
MTA1-220ENST00000552286 GPAA1O43292 621 aa23.22■■□□□ 1.31
MTA1-220ENST00000552286 DTNBO60941 627 aa23.22■■□□□ 1.31
MTA1-220ENST00000552286 F13A1P00488 732 aa23.22■■□□□ 1.31
MTA1-220ENST00000552286 EXOSC10Q01780 885 aaKnown RBP23.22■■□□□ 1.31
MTA1-220ENST00000552286 UBE3CQ15386 1083 aa23.22■■□□□ 1.31
MTA1-220ENST00000552286 ILDR2Q71H61 639 aa23.22■■□□□ 1.31
MTA1-220ENST00000552286 MTMR6Q9Y217 621 aa23.22■■□□□ 1.31
MTA1-220ENST00000552286 DPEP1P16444 411 aa23.21■■□□□ 1.31
MTA1-220ENST00000552286 FOXD4L6Q3SYB3 417 aaPredicted RBP23.21■■□□□ 1.31
MTA1-220ENST00000552286 FOXD4L3Q6VB84 417 aaPredicted RBP23.21■■□□□ 1.31
MTA1-220ENST00000552286 WWC3Q9ULE0 1092 aa23.21■■□□□ 1.31
MTA1-220ENST00000552286 KIAA1551Q9HCM1 1747 aa23.21■■□□□ 1.31
MTA1-220ENST00000552286 XRCC6P12956 609 aaKnown RBP eCLIP23.21■■□□□ 1.314e-8■■■■□ 20.7
MTA1-220ENST00000552286 PDIA4P13667 645 aaKnown RBP23.21■■□□□ 1.31
MTA1-220ENST00000552286 MAP3K12Q12852 859 aa23.21■■□□□ 1.31
MTA1-220ENST00000552286 CHAF1AQ13111 956 aaPredicted RBP23.21■■□□□ 1.31
MTA1-220ENST00000552286 STK3Q13188 491 aa23.21■■□□□ 1.31
MTA1-220ENST00000552286 GTF3C6Q969F1 213 aa23.21■■□□□ 1.31
MTA1-220ENST00000552286 ABCF2Q9UG63 623 aa23.21■■□□□ 1.31
MTA1-220ENST00000552286 PDS5AQ29RF7 1337 aaKnown RBP23.21■■□□□ 1.31
MTA1-220ENST00000552286 FGAP02671 866 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 PDE6AP16499 860 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 MRE11P49959 708 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 CAVIN1Q6NZI2 390 aaKnown RBP23.2■■□□□ 1.3
MTA1-220ENST00000552286 BRF1Q92994 677 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 SGIP1Q9BQI5 828 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 LRRC2Q9BYS8 371 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 LRP2BPQ9P2M1 347 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 IMMTQ16891 758 aaKnown RBP23.2■■□□□ 1.3
MTA1-220ENST00000552286 GAS2L3Q86XJ1 694 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 TTLL6Q8N841 843 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 AGXT2Q9BYV1 514 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 ATP6V1DQ9Y5K8 247 aa23.2■■□□□ 1.3
MTA1-220ENST00000552286 MBD3O95983 291 aa23.19■■□□□ 1.3
MTA1-220ENST00000552286 KCNA3P22001 575 aa23.19■■□□□ 1.3
MTA1-220ENST00000552286 FGD1P98174 961 aa23.19■■□□□ 1.3
MTA1-220ENST00000552286 LARP1BQ659C4 914 aaKnown RBP23.19■■□□□ 1.3
MTA1-220ENST00000552286 PPP1R1BQ9UD71 204 aaPredicted RBP23.19■■□□□ 1.3
MTA1-220ENST00000552286 BRPF3Q9ULD4 1205 aa23.19■■□□□ 1.3
MTA1-220ENST00000552286 JAG2Q9Y219 1238 aa23.19■■□□□ 1.3
MTA1-220ENST00000552286 ZNF532Q9HCE3 1301 aa23.19■■□□□ 1.3
MTA1-220ENST00000552286 RIMBP2O15034 1052 aa23.18■■□□□ 1.3
MTA1-220ENST00000552286 MAGEB6Q8N7X4 407 aa23.18■■□□□ 1.3
MTA1-220ENST00000552286 TDRD7Q8NHU6 1098 aaKnown RBP23.18■■□□□ 1.3
MTA1-220ENST00000552286 C7orf43Q8WVR3 580 aa23.18■■□□□ 1.3
MTA1-220ENST00000552286 CD209Q9NNX6 404 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms