RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PSMD2Q13200 908 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 ORC1Q13415 861 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 FAM50AQ14320 339 aaKnown RBP3.54□□□□□ -1.84
CPSF6-207ENST00000551516 TSNAXIP1Q2TAA8 658 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 TMEM132EQ6IEE7 984 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 PTF1AQ7RTS3 328 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 TMC4Q7Z404 712 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 SNX29Q8TEQ0 813 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 FBF1Q8TES7 1133 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 PMEPA1Q969W9 287 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 KIFC2Q96AC6 838 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 KLRG1Q96E93 195 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 SENP2Q9HC62 589 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 BRD7Q9NPI1 651 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 ATP13A2Q9NQ11 1180 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 AAASQ9NRG9 546 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 NLRP2Q9NX02 1062 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 WWC3Q9ULE0 1092 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 SPG7Q9UQ90 795 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 KIF1AQ12756 1690 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 LRP5O75197 1615 aa3.54□□□□□ -1.84
CPSF6-207ENST00000551516 SSH2Q76I76 1423 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 YTHDC2Q9H6S0 1430 aaKnown RBP3.53□□□□□ -1.84
CPSF6-207ENST00000551516 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.53□□□□□ -1.84
CPSF6-207ENST00000551516 ANKRD30BQ9BXX2 1392 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 USP32Q8NFA0 1604 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 KHNYNO15037 678 aaKnown RBP3.53□□□□□ -1.84
CPSF6-207ENST00000551516 ATXN7O15265 892 aaPredicted RBP3.53□□□□□ -1.84
CPSF6-207ENST00000551516 PHACTR2O75167 634 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 TNFRSF21O75509 655 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 EGFRP00533 1210 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 TCF3P15923 654 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 DAB2P98082 770 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 TYRO3Q06418 890 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 SAMD5Q5TGI4 173 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 MEX3CQ5U5Q3 659 aaKnown RBP3.53□□□□□ -1.84
CPSF6-207ENST00000551516 TTC39BQ5VTQ0 682 aaPredicted RBP3.53□□□□□ -1.84
CPSF6-207ENST00000551516 KRT28Q7Z3Y7 464 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 NLRP13Q86W25 1043 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 TMEM87AQ8NBN3 555 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 ZCCHC2Q9C0B9 1178 aaKnown RBP3.53□□□□□ -1.84
CPSF6-207ENST00000551516 NUCKS1Q9H1E3 243 aaKnown RBP3.53□□□□□ -1.84
CPSF6-207ENST00000551516 ELP3Q9H9T3 547 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 VTI1BQ9UEU0 232 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 KCNH4Q9UQ05 1017 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 PCDHGC4Q9Y5F7 938 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 KCNMB2Q9Y691 235 aa3.53□□□□□ -1.84
CPSF6-207ENST00000551516 BCL9O00512 1426 aa3.53□□□□□ -1.85
CPSF6-207ENST00000551516 TNS3Q68CZ2 1445 aa3.53□□□□□ -1.85
CPSF6-207ENST00000551516 THSD7AQ9UPZ6 1657 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 SPATA31A1Q5TZJ5 1347 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 SLC35F4A4IF30 521 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 GIPC1O14908 333 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 ST8SIA5O15466 376 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 FAM157BP0CG42 384 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 GNA15P30679 374 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 KCNQ4P56696 695 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 PTSQ03393 145 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 LAMC2Q13753 1193 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 CCINQ13939 588 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 MRPL58Q14197 206 aaKnown RBP3.52□□□□□ -1.85
CPSF6-207ENST00000551516 TRIP4Q15650 581 aaPredicted RBP3.52□□□□□ -1.85
CPSF6-207ENST00000551516 KRT27Q7Z3Y8 459 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 GMCL1Q96IK5 515 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 FAM161BQ96MY7 647 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 PNMA5Q96PV4 448 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 BACH2Q9BYV9 841 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 PDGFDQ9GZP0 370 aaPredicted RBP3.52□□□□□ -1.85
CPSF6-207ENST00000551516 ZFYVE28Q9HCC9 887 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 IGSF5Q9NSI5 407 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 PPP4R2Q9NY27 417 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 ABI2Q9NYB9 513 aaPredicted RBP3.52□□□□□ -1.85
CPSF6-207ENST00000551516 TMEM63CQ9P1W3 806 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 FOXD3Q9UJU5 478 aaPredicted RBP3.52□□□□□ -1.85
CPSF6-207ENST00000551516 AK5Q9Y6K8 562 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 DLC1Q96QB1 1528 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 SPHKAPQ2M3C7 1700 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 CCDC144AA2RUR9 1427 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 ANKARQ7Z5J8 1434 aa3.52□□□□□ -1.85
CPSF6-207ENST00000551516 POLR3AO14802 1390 aaPredicted RBP3.51□□□□□ -1.85
CPSF6-207ENST00000551516 USP19O94966 1318 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 TRPM3Q9HCF6 1732 aaPredicted RBP3.51□□□□□ -1.85
CPSF6-207ENST00000551516 CRYBG1Q9Y4K1 1723 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 SENP3-EIF4A1A0A087X0R7 540 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 DCDC2BA2VCK2 349 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 SOBPA7XYQ1 873 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 PHF20L1A8MW92 1017 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 SCAMP3O14828 347 aaKnown RBP3.51□□□□□ -1.85
CPSF6-207ENST00000551516 SASH3O75995 380 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 RECKO95980 971 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 CES1P23141 567 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 EIF4BP23588 611 aaKnown RBP3.51□□□□□ -1.85
CPSF6-207ENST00000551516 SFSWAPQ12872 951 aaKnown RBP3.51□□□□□ -1.85
CPSF6-207ENST00000551516 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.51□□□□□ -1.85
CPSF6-207ENST00000551516 FAM182BQ5T319 152 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 FOXR1Q6PIV2 292 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 CCDC155Q8N6L0 562 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 CCDC74AQ96AQ1 378 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 SETDB2Q96T68 719 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 MPHOSPH9Q99550 1183 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms