RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 MYCP01106 439 aaPredicted RBP14.04□□□□□ -0.16
PFDN5-212ENST00000550880 CETPP11597 493 aa14.04□□□□□ -0.16
PFDN5-212ENST00000550880 PRMT2P55345 433 aa14.04□□□□□ -0.16
PFDN5-212ENST00000550880 UBE4AQ14139 1066 aa14.04□□□□□ -0.16
PFDN5-212ENST00000550880 VPS37DQ86XT2 251 aa14.04□□□□□ -0.16
PFDN5-212ENST00000550880 WWC1Q8IX03 1113 aa14.04□□□□□ -0.16
PFDN5-212ENST00000550880 TDRD7Q8NHU6 1098 aaKnown RBP14.04□□□□□ -0.16
PFDN5-212ENST00000550880 ZCCHC17Q9NP64 241 aaKnown RBP14.04□□□□□ -0.16
PFDN5-212ENST00000550880 AOX1Q06278 1338 aa14.04□□□□□ -0.16
PFDN5-212ENST00000550880 IL16Q14005 1332 aa14.04□□□□□ -0.16
PFDN5-212ENST00000550880 HTTP42858 3142 aa14.04□□□□□ -0.16
PFDN5-212ENST00000550880 TLR2O60603 784 aa14.03□□□□□ -0.16
PFDN5-212ENST00000550880 FRAT2O75474 233 aaPredicted RBP14.03□□□□□ -0.16
PFDN5-212ENST00000550880 CRKP46108 304 aa14.03□□□□□ -0.16
PFDN5-212ENST00000550880 FAM43AQ8N2R8 423 aa14.03□□□□□ -0.16
PFDN5-212ENST00000550880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.03□□□□□ -0.162e-11■■□□□ 12.5
PFDN5-212ENST00000550880 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
PFDN5-212ENST00000550880 TEPSINQ96N21 525 aa14.03□□□□□ -0.16
PFDN5-212ENST00000550880 TMEM39BQ9GZU3 492 aa14.03□□□□□ -0.16
PFDN5-212ENST00000550880 C9orf78Q9NZ63 289 aaPredicted RBP14.03□□□□□ -0.16
PFDN5-212ENST00000550880 TMOD2Q9NZR1 351 aa14.03□□□□□ -0.16
PFDN5-212ENST00000550880 LAMB1P07942 1786 aa14.03□□□□□ -0.16
PFDN5-212ENST00000550880 SPDYE5A6NIY4 337 aa14.02□□□□□ -0.17
PFDN5-212ENST00000550880 GYG1P46976 350 aa14.02□□□□□ -0.17
PFDN5-212ENST00000550880 LACTBP83111 547 aaPredicted RBP14.02□□□□□ -0.17
PFDN5-212ENST00000550880 CAP1Q01518 475 aa14.02□□□□□ -0.17
PFDN5-212ENST00000550880 SNAPC2Q13487 334 aa14.02□□□□□ -0.17
PFDN5-212ENST00000550880 ERO1BQ86YB8 467 aa14.02□□□□□ -0.17
PFDN5-212ENST00000550880 ZNF594Q96JF6 807 aaPredicted RBP14.02□□□□□ -0.17
PFDN5-212ENST00000550880 CENPFP49454 3210 aa14.02□□□□□ -0.17
PFDN5-212ENST00000550880 H0YGN5 161 aa14.01□□□□□ -0.17
PFDN5-212ENST00000550880 GRM8O00222 908 aa14.01□□□□□ -0.17
PFDN5-212ENST00000550880 HOXD10P28358 340 aa14.01□□□□□ -0.17
PFDN5-212ENST00000550880 HDLBPQ00341 1268 aaKnown RBP14.01□□□□□ -0.17
PFDN5-212ENST00000550880 CAVIN4Q5BKX8 364 aa14.01□□□□□ -0.17
PFDN5-212ENST00000550880 BEND3Q5T5X7 828 aa14.01□□□□□ -0.17
PFDN5-212ENST00000550880 SH3TC2Q8TF17 1288 aa14.01□□□□□ -0.17
PFDN5-212ENST00000550880 TBC1D22AQ8WUA7 517 aa14.01□□□□□ -0.17
PFDN5-212ENST00000550880 DPF3Q92784 378 aa14.01□□□□□ -0.17
PFDN5-212ENST00000550880 TEKT1Q969V4 418 aa14.01□□□□□ -0.17
PFDN5-212ENST00000550880 FAM84BQ96KN1 310 aaPredicted RBP14.01□□□□□ -0.17
PFDN5-212ENST00000550880 F6X3S4 739 aa14□□□□□ -0.17
PFDN5-212ENST00000550880 DCAF15Q66K64 600 aa14□□□□□ -0.17
PFDN5-212ENST00000550880 CDAN1Q8IWY9 1227 aa14□□□□□ -0.17
PFDN5-212ENST00000550880 NKX2-3Q8TAU0 364 aa14□□□□□ -0.17
PFDN5-212ENST00000550880 WRNIP1Q96S55 665 aa14□□□□□ -0.17
PFDN5-212ENST00000550880 MROH5Q6ZUA9 1318 aa13.99□□□□□ -0.17
PFDN5-212ENST00000550880 BTBD19C9JJ37 291 aa13.99□□□□□ -0.17
PFDN5-212ENST00000550880 VAMP4O75379 141 aa13.99□□□□□ -0.17
PFDN5-212ENST00000550880 CHAF1AQ13111 956 aaPredicted RBP13.99□□□□□ -0.17
PFDN5-212ENST00000550880 PPIL2Q13356 520 aa13.99□□□□□ -0.17
PFDN5-212ENST00000550880 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
PFDN5-212ENST00000550880 MAST3O60307 1309 aa13.98□□□□□ -0.17
PFDN5-212ENST00000550880 FANCIQ9NVI1 1328 aa13.98□□□□□ -0.17
PFDN5-212ENST00000550880 IRF6O14896 467 aa13.98□□□□□ -0.17
PFDN5-212ENST00000550880 EPHA10Q5JZY3 1008 aa13.98□□□□□ -0.17
PFDN5-212ENST00000550880 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
PFDN5-212ENST00000550880 FAM83AQ86UY5 434 aa13.98□□□□□ -0.17
PFDN5-212ENST00000550880 RAET1EQ8TD07 263 aa13.98□□□□□ -0.17
PFDN5-212ENST00000550880 ZKSCAN4Q969J2 545 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-212ENST00000550880 HTATIP2Q9BUP3 242 aa13.98□□□□□ -0.17
PFDN5-212ENST00000550880 ARHGAP39Q9C0H5 1083 aa13.98□□□□□ -0.17
PFDN5-212ENST00000550880 SNCAIPQ9Y6H5 919 aa13.98□□□□□ -0.17
PFDN5-212ENST00000550880 BRCA2P51587 3418 aa13.97□□□□□ -0.17
PFDN5-212ENST00000550880 ALDH1L1O75891 902 aa13.97□□□□□ -0.17
PFDN5-212ENST00000550880 FMNL1O95466 1100 aaPredicted RBP13.97□□□□□ -0.17
PFDN5-212ENST00000550880 PPATQ06203 517 aa13.97□□□□□ -0.17
PFDN5-212ENST00000550880 FKBP1CQ5VVH2 108 aa13.97□□□□□ -0.17
PFDN5-212ENST00000550880 SLC4A10Q6U841 1118 aa13.97□□□□□ -0.17
PFDN5-212ENST00000550880 TRIM47Q96LD4 638 aa13.97□□□□□ -0.17
PFDN5-212ENST00000550880 MRIQ9BWK5 157 aa13.97□□□□□ -0.17
PFDN5-212ENST00000550880 ZNF341Q9BYN7 854 aa13.97□□□□□ -0.17
PFDN5-212ENST00000550880 BIN2Q9UBW5 565 aaPredicted RBP13.97□□□□□ -0.17
PFDN5-212ENST00000550880 IQSEC3Q9UPP2 1182 aaPredicted RBP13.97□□□□□ -0.17
PFDN5-212ENST00000550880 OTOFQ9HC10 1997 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
PFDN5-212ENST00000550880 PSMC4P43686 418 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 CACNB3P54284 484 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 EXOSC9Q06265 439 aaKnown RBP13.96□□□□□ -0.17
PFDN5-212ENST00000550880 C17orf99Q6UX52 265 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 FBXO33Q7Z6M2 555 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 WDR63Q8IWG1 891 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 ZDHHC15Q96MV8 337 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 SRCIN1Q9C0H9 1055 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 SRRDQ9UH36 339 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 CPA4Q9UI42 421 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 SUGT1Q9Y2Z0 365 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 NR2E3Q9Y5X4 410 aa13.96□□□□□ -0.17
PFDN5-212ENST00000550880 CACNA1FO60840 1977 aa13.95□□□□□ -0.18
PFDN5-212ENST00000550880 GRK4P32298 578 aa13.95□□□□□ -0.18
PFDN5-212ENST00000550880 UBXN2AP68543 259 aa13.95□□□□□ -0.18
PFDN5-212ENST00000550880 METTL24Q5JXM2 366 aa13.95□□□□□ -0.18
PFDN5-212ENST00000550880 ANKRD23Q86SG2 305 aa13.95□□□□□ -0.18
PFDN5-212ENST00000550880 PUS3Q9BZE2 481 aaKnown RBP13.95□□□□□ -0.18
PFDN5-212ENST00000550880 RIPOR2Q9Y4F9 1068 aa13.95□□□□□ -0.18
PFDN5-212ENST00000550880 A0A1B0GUL6 1792 aa13.94□□□□□ -0.18
PFDN5-212ENST00000550880 PDHXO00330 501 aa13.94□□□□□ -0.18
PFDN5-212ENST00000550880 GJB1P08034 283 aa13.94□□□□□ -0.18
PFDN5-212ENST00000550880 GJA8P48165 433 aa13.94□□□□□ -0.18
PFDN5-212ENST00000550880 MTFR1Q15390 333 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms