RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 PUS3Q9BZE2 481 aaKnown RBP17.09■□□□□ 0.33
TROAP-211ENST00000549891 RBBP6Q7Z6E9 1792 aaKnown RBP17.09■□□□□ 0.33
TROAP-211ENST00000549891 MYH13Q9UKX3 1938 aa17.08■□□□□ 0.33
TROAP-211ENST00000549891 GJA5P36382 358 aa17.08■□□□□ 0.32
TROAP-211ENST00000549891 HDLBPQ00341 1268 aaKnown RBP17.08■□□□□ 0.32
TROAP-211ENST00000549891 CRHR2Q13324 411 aa17.08■□□□□ 0.32
TROAP-211ENST00000549891 RABL6Q3YEC7 729 aaPredicted RBP17.08■□□□□ 0.32
TROAP-211ENST00000549891 KAZALD1Q96I82 304 aa17.08■□□□□ 0.32
TROAP-211ENST00000549891 BICC1Q9H694 974 aaKnown RBP17.08■□□□□ 0.32
TROAP-211ENST00000549891 ELP3Q9H9T3 547 aa17.08■□□□□ 0.32
TROAP-211ENST00000549891 TCP10L2B9ZVM9 353 aa17.07■□□□□ 0.32
TROAP-211ENST00000549891 ZEB1P37275 1124 aaPredicted RBP17.07■□□□□ 0.32
TROAP-211ENST00000549891 SP3Q02447 781 aa17.07■□□□□ 0.32
TROAP-211ENST00000549891 ARHGEF6Q15052 776 aa17.07■□□□□ 0.32
TROAP-211ENST00000549891 METTL24Q5JXM2 366 aa17.07■□□□□ 0.32
TROAP-211ENST00000549891 FBXO33Q7Z6M2 555 aa17.07■□□□□ 0.32
TROAP-211ENST00000549891 TEPSINQ96N21 525 aa17.07■□□□□ 0.32
TROAP-211ENST00000549891 CSADQ9Y600 493 aa17.07■□□□□ 0.32
TROAP-211ENST00000549891 HTTP42858 3142 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 MAST3O60307 1309 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 PTPRCP08575 1304 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 PDE8BO95263 885 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 GTF2A2P52657 109 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 MAP3K9P80192 1104 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 CHAF1AQ13111 956 aaPredicted RBP17.06■□□□□ 0.32
TROAP-211ENST00000549891 CD99L2Q8TCZ2 262 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 TEKT1Q969V4 418 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 HOOK2Q96ED9 719 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 PTPN18Q99952 460 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 TMEM39BQ9GZU3 492 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 EFCC1Q9HA90 598 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 TMOD2Q9NZR1 351 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 PTPN22Q9Y2R2 807 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 CENPFP49454 3210 aa17.06■□□□□ 0.32
TROAP-211ENST00000549891 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
TROAP-211ENST00000549891 WDHD1O75717 1129 aaPredicted RBP17.05■□□□□ 0.32
TROAP-211ENST00000549891 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.05■□□□□ 0.32
TROAP-211ENST00000549891 MRIQ9BWK5 157 aa17.05■□□□□ 0.32
TROAP-211ENST00000549891 IQSEC3Q9UPP2 1182 aaPredicted RBP17.05■□□□□ 0.32
TROAP-211ENST00000549891 VGLL4Q14135 290 aa17.04■□□□□ 0.32
TROAP-211ENST00000549891 LRRC24Q50LG9 513 aa17.04■□□□□ 0.32
TROAP-211ENST00000549891 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.04■□□□□ 0.323e-11■□□□□ 9.2
TROAP-211ENST00000549891 GCC1Q96CN9 775 aa17.04■□□□□ 0.32
TROAP-211ENST00000549891 MS4A4AQ96JQ5 239 aa17.04■□□□□ 0.32
TROAP-211ENST00000549891 ZFYVE28Q9HCC9 887 aa17.04■□□□□ 0.32
TROAP-211ENST00000549891 SUGT1Q9Y2Z0 365 aa17.04■□□□□ 0.32
TROAP-211ENST00000549891 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
TROAP-211ENST00000549891 KIAA0100Q14667 2235 aaKnown RBP17.03■□□□□ 0.32
TROAP-211ENST00000549891 CCL15-CCL14A0A0B4J2E2 113 aa17.03■□□□□ 0.32
TROAP-211ENST00000549891 IFIT1P09914 478 aaKnown RBP17.03■□□□□ 0.32
TROAP-211ENST00000549891 TAF1CQ15572 869 aaPredicted RBP17.03■□□□□ 0.32
TROAP-211ENST00000549891 CCL15Q16663 113 aa17.03■□□□□ 0.32
TROAP-211ENST00000549891 FAM83AQ86UY5 434 aa17.03■□□□□ 0.32
TROAP-211ENST00000549891 MRPL50Q8N5N7 158 aaKnown RBP17.03■□□□□ 0.32
TROAP-211ENST00000549891 ANKRD44Q8N8A2 993 aa17.03■□□□□ 0.32
TROAP-211ENST00000549891 VGLL2Q8N8G2 317 aa17.03■□□□□ 0.32
TROAP-211ENST00000549891 ZDHHC15Q96MV8 337 aa17.03■□□□□ 0.32
TROAP-211ENST00000549891 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
TROAP-211ENST00000549891 AK9Q5TCS8 1911 aa17.02■□□□□ 0.32
TROAP-211ENST00000549891 PUM3Q15397 648 aaKnown RBP17.02■□□□□ 0.32
TROAP-211ENST00000549891 FKBP1CQ5VVH2 108 aa17.02■□□□□ 0.32
TROAP-211ENST00000549891 CDAN1Q8IWY9 1227 aa17.02■□□□□ 0.32
TROAP-211ENST00000549891 BRI3BPQ8WY22 251 aa17.02■□□□□ 0.32
TROAP-211ENST00000549891 ARMC5Q96C12 935 aa17.02■□□□□ 0.32
TROAP-211ENST00000549891 OTUD5Q96G74 571 aa17.02■□□□□ 0.32
TROAP-211ENST00000549891 SPDYE5A6NIY4 337 aa17.01■□□□□ 0.31
TROAP-211ENST00000549891 BCAMP50895 628 aa17.01■□□□□ 0.31
TROAP-211ENST00000549891 GRIK5Q16478 980 aa17.01■□□□□ 0.31
TROAP-211ENST00000549891 DCAF15Q66K64 600 aa17.01■□□□□ 0.31
TROAP-211ENST00000549891 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
TROAP-211ENST00000549891 POTEFA5A3E0 1075 aa17■□□□□ 0.31
TROAP-211ENST00000549891 E9PSI1 815 aa17■□□□□ 0.31
TROAP-211ENST00000549891 CETPP11597 493 aa17■□□□□ 0.31
TROAP-211ENST00000549891 HHIPL2Q6UWX4 724 aa17■□□□□ 0.31
TROAP-211ENST00000549891 NBPF11Q86T75 865 aa17■□□□□ 0.31
TROAP-211ENST00000549891 ERO1BQ86YB8 467 aa17■□□□□ 0.31
TROAP-211ENST00000549891 WRNIP1Q96S55 665 aa17■□□□□ 0.31
TROAP-211ENST00000549891 ZCCHC17Q9NP64 241 aaKnown RBP17■□□□□ 0.31
TROAP-211ENST00000549891 MKI67P46013 3256 aaKnown RBP17■□□□□ 0.31
TROAP-211ENST00000549891 RPAP1Q9BWH6 1393 aaPredicted RBP17■□□□□ 0.31
TROAP-211ENST00000549891 SLC5A1P13866 664 aa16.99■□□□□ 0.31
TROAP-211ENST00000549891 CACNB3P54284 484 aa16.99■□□□□ 0.31
TROAP-211ENST00000549891 SNAPC2Q13487 334 aa16.99■□□□□ 0.31
TROAP-211ENST00000549891 KLHDC4Q8TBB5 520 aa16.99■□□□□ 0.31
TROAP-211ENST00000549891 WDR66Q8TBY9 1149 aa16.99■□□□□ 0.31
TROAP-211ENST00000549891 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
TROAP-211ENST00000549891 USP44Q9H0E7 712 aa16.99■□□□□ 0.31
TROAP-211ENST00000549891 FGFR2P21802 821 aa16.98■□□□□ 0.31
TROAP-211ENST00000549891 KIF22Q14807 665 aa16.98■□□□□ 0.31
TROAP-211ENST00000549891 SLC9C1Q4G0N8 1177 aa16.98■□□□□ 0.31
TROAP-211ENST00000549891 APOBEC3HQ6NTF7 200 aaKnown RBP16.98■□□□□ 0.31
TROAP-211ENST00000549891 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
TROAP-211ENST00000549891 LPIN2Q92539 896 aa16.98■□□□□ 0.31
TROAP-211ENST00000549891 SNCAIPQ9Y6H5 919 aa16.98■□□□□ 0.31
TROAP-211ENST00000549891 EYA2O00167 538 aa16.97■□□□□ 0.31
TROAP-211ENST00000549891 TLR2O60603 784 aa16.97■□□□□ 0.31
TROAP-211ENST00000549891 PPIL2Q13356 520 aa16.97■□□□□ 0.31
TROAP-211ENST00000549891 SSH1Q8WYL5 1049 aa16.97■□□□□ 0.31
TROAP-211ENST00000549891 ZKSCAN4Q969J2 545 aaPredicted RBP16.97■□□□□ 0.31
TROAP-211ENST00000549891 ZNF341Q9BYN7 854 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms