RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 ZKSCAN2Q63HK3 967 aa23.2■■□□□ 1.3
CHMP1A-203ENST00000547614 VEZTQ9HBM0 779 aa23.2■■□□□ 1.3
CHMP1A-203ENST00000547614 ZNF70Q9UC06 446 aaPredicted RBP23.2■■□□□ 1.3
CHMP1A-203ENST00000547614 PA2G4Q9UQ80 394 aaKnown RBP23.2■■□□□ 1.3
CHMP1A-203ENST00000547614 ZBED9Q6R2W3 1325 aa23.19■■□□□ 1.3
CHMP1A-203ENST00000547614 PPP1R12BO60237 982 aaPredicted RBP23.19■■□□□ 1.3
CHMP1A-203ENST00000547614 RASA3Q14644 834 aa23.19■■□□□ 1.3
CHMP1A-203ENST00000547614 GRIK5Q16478 980 aa23.19■■□□□ 1.3
CHMP1A-203ENST00000547614 MAP3K11Q16584 847 aa23.19■■□□□ 1.3
CHMP1A-203ENST00000547614 WDR66Q8TBY9 1149 aa23.19■■□□□ 1.3
CHMP1A-203ENST00000547614 CLUAP1Q96AJ1 413 aa23.19■■□□□ 1.3
CHMP1A-203ENST00000547614 MAST3O60307 1309 aa23.18■■□□□ 1.3
CHMP1A-203ENST00000547614 UNCXA6NJT0 531 aa23.18■■□□□ 1.3
CHMP1A-203ENST00000547614 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
CHMP1A-203ENST00000547614 TEKT1Q969V4 418 aa23.18■■□□□ 1.3
CHMP1A-203ENST00000547614 TDRD3Q9H7E2 651 aaKnown RBP23.18■■□□□ 1.3
CHMP1A-203ENST00000547614 ANGEL1Q9UNK9 670 aaKnown RBP23.18■■□□□ 1.3
CHMP1A-203ENST00000547614 TNNQ9UQP3 1299 aa23.18■■□□□ 1.3
CHMP1A-203ENST00000547614 ZBTB22O15209 634 aa23.17■■□□□ 1.3
CHMP1A-203ENST00000547614 GNAI2P04899 355 aa23.17■■□□□ 1.3
CHMP1A-203ENST00000547614 PRKG1Q13976 671 aa23.17■■□□□ 1.3
CHMP1A-203ENST00000547614 GNL3LQ9NVN8 582 aaKnown RBP23.17■■□□□ 1.3
CHMP1A-203ENST00000547614 RNF186Q9NXI6 227 aa23.17■■□□□ 1.3
CHMP1A-203ENST00000547614 NBPF12Q5TAG4 269 aaPredicted RBP23.16■■□□□ 1.3
CHMP1A-203ENST00000547614 ZDHHC15Q96MV8 337 aa23.16■■□□□ 1.3
CHMP1A-203ENST00000547614 SEMA3EO15041 775 aa23.15■■□□□ 1.3
CHMP1A-203ENST00000547614 TRPA1O75762 1119 aa23.15■■□□□ 1.3
CHMP1A-203ENST00000547614 CAPN15O75808 1086 aa23.15■■□□□ 1.3
CHMP1A-203ENST00000547614 HHIPL2Q6UWX4 724 aa23.15■■□□□ 1.3
CHMP1A-203ENST00000547614 AKAP11Q9UKA4 1901 aa23.15■■□□□ 1.3
CHMP1A-203ENST00000547614 TM4SF4P48230 202 aa23.14■■□□□ 1.29
CHMP1A-203ENST00000547614 TNNI2P48788 182 aa23.14■■□□□ 1.29
CHMP1A-203ENST00000547614 TMEM57Q8N5G2 664 aa23.14■■□□□ 1.29
CHMP1A-203ENST00000547614 SSC5DA1L4H1 1573 aa23.14■■□□□ 1.29
CHMP1A-203ENST00000547614 SLC10A4Q96EP9 437 aa23.13■■□□□ 1.29
CHMP1A-203ENST00000547614 DENND2AQ9ULE3 1009 aa23.13■■□□□ 1.29
CHMP1A-203ENST00000547614 AKAP2Q9Y2D5 859 aa23.13■■□□□ 1.29
CHMP1A-203ENST00000547614 IREB2P48200 963 aaKnown RBP23.12■■□□□ 1.29
CHMP1A-203ENST00000547614 FKBP1CQ5VVH2 108 aa23.12■■□□□ 1.29
CHMP1A-203ENST00000547614 SPRYD7Q5W111 196 aa23.12■■□□□ 1.29
CHMP1A-203ENST00000547614 TEPSINQ96N21 525 aa23.12■■□□□ 1.29
CHMP1A-203ENST00000547614 FZD1Q9UP38 647 aa23.12■■□□□ 1.29
CHMP1A-203ENST00000547614 CASP8AP2Q9UKL3 1982 aa23.12■■□□□ 1.29
CHMP1A-203ENST00000547614 SALL1Q9NSC2 1324 aa23.11■■□□□ 1.29
CHMP1A-203ENST00000547614 TCP10L2B9ZVM9 353 aa23.11■■□□□ 1.29
CHMP1A-203ENST00000547614 USP2O75604 605 aaPredicted RBP23.11■■□□□ 1.29
CHMP1A-203ENST00000547614 PHKA1P46020 1223 aa23.11■■□□□ 1.29
CHMP1A-203ENST00000547614 SREBF2Q12772 1141 aa23.11■■□□□ 1.29
CHMP1A-203ENST00000547614 APOBEC3HQ6NTF7 200 aaKnown RBP23.11■■□□□ 1.29
CHMP1A-203ENST00000547614 MYH13Q9UKX3 1938 aa23.11■■□□□ 1.29
CHMP1A-203ENST00000547614 TIMM10P62072 90 aa23.1■■□□□ 1.29
CHMP1A-203ENST00000547614 TFCP2Q12800 502 aa23.1■■□□□ 1.29
CHMP1A-203ENST00000547614 CCDC102BQ68D86 513 aa23.1■■□□□ 1.29
CHMP1A-203ENST00000547614 FTSJ3Q8IY81 847 aaKnown RBP23.1■■□□□ 1.29
CHMP1A-203ENST00000547614 TMOD2Q9NZR1 351 aa23.1■■□□□ 1.29
CHMP1A-203ENST00000547614 PNMA6EA0A0J9YXQ4 647 aa23.09■■□□□ 1.29
CHMP1A-203ENST00000547614 A0A1B0GUL7 405 aa23.09■■□□□ 1.29
CHMP1A-203ENST00000547614 ZBTB48P10074 688 aaPredicted RBP23.09■■□□□ 1.29
CHMP1A-203ENST00000547614 INHBEP58166 350 aa23.09■■□□□ 1.29
CHMP1A-203ENST00000547614 FAM83AQ86UY5 434 aa23.09■■□□□ 1.29
CHMP1A-203ENST00000547614 ANKRD13AQ8IZ07 590 aa23.09■■□□□ 1.29
CHMP1A-203ENST00000547614 ABHD8Q96I13 439 aa23.09■■□□□ 1.29
CHMP1A-203ENST00000547614 TMEM39BQ9GZU3 492 aa23.09■■□□□ 1.29
CHMP1A-203ENST00000547614 LDHBP07195 334 aaKnown RBP23.08■■□□□ 1.29
CHMP1A-203ENST00000547614 ADORA1P30542 326 aa23.08■■□□□ 1.29
CHMP1A-203ENST00000547614 MKRN3Q13064 507 aaKnown RBP23.08■■□□□ 1.29
CHMP1A-203ENST00000547614 ZGPATQ8N5A5 531 aaKnown RBP23.08■■□□□ 1.29
CHMP1A-203ENST00000547614 CLMNQ96JQ2 1002 aa23.08■■□□□ 1.29
CHMP1A-203ENST00000547614 PDS5AQ29RF7 1337 aaKnown RBP23.08■■□□□ 1.28
CHMP1A-203ENST00000547614 PRDX5P30044 214 aa23.07■■□□□ 1.28
CHMP1A-203ENST00000547614 G3BP1Q13283 466 aaKnown RBP eCLIP23.07■■□□□ 1.28
CHMP1A-203ENST00000547614 MVPQ14764 893 aaKnown RBP23.07■■□□□ 1.28
CHMP1A-203ENST00000547614 XAGE2Q96GT9 111 aa23.07■■□□□ 1.28
CHMP1A-203ENST00000547614 MANSC4A6NHS7 340 aaPredicted RBP23.06■■□□□ 1.28
CHMP1A-203ENST00000547614 WNK4Q96J92 1243 aa23.06■■□□□ 1.28
CHMP1A-203ENST00000547614 ZBTB7BO15156 539 aaPredicted RBP23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 RLBP1P12271 317 aa23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 CACNB3P54284 484 aa23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 ATP8B2P98198 1209 aa23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 POLA2Q14181 598 aa23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 CDAN1Q8IWY9 1227 aa23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 SSH3Q8TE77 659 aa23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 HOOK2Q96ED9 719 aa23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 CFHR5Q9BXR6 569 aa23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 MCOLN1Q9GZU1 580 aa23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 DAGLAQ9Y4D2 1042 aa23.05■■□□□ 1.28
CHMP1A-203ENST00000547614 ALDH1A1P00352 501 aa23.04■■□□□ 1.28
CHMP1A-203ENST00000547614 RASGRF1Q13972 1273 aa23.04■■□□□ 1.28
CHMP1A-203ENST00000547614 DIXDC1Q155Q3 683 aa23.04■■□□□ 1.28
CHMP1A-203ENST00000547614 NOM1Q5C9Z4 860 aaKnown RBP23.04■■□□□ 1.28
CHMP1A-203ENST00000547614 ITPRIPQ8IWB1 547 aa23.04■■□□□ 1.28
CHMP1A-203ENST00000547614 NEUROD6Q96NK8 337 aa23.04■■□□□ 1.28
CHMP1A-203ENST00000547614 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.04■■□□□ 1.28
CHMP1A-203ENST00000547614 DGKZQ13574 1117 aa23.03■■□□□ 1.28
CHMP1A-203ENST00000547614 RPAP1Q9BWH6 1393 aaPredicted RBP23.02■■□□□ 1.28
CHMP1A-203ENST00000547614 TBC1D8O95759 1140 aa23.02■■□□□ 1.28
CHMP1A-203ENST00000547614 MAP3K9P80192 1104 aa23.02■■□□□ 1.28
CHMP1A-203ENST00000547614 SPTY2D1Q68D10 685 aaPredicted RBP23.02■■□□□ 1.28
CHMP1A-203ENST00000547614 CDC42EP5Q6NZY7 148 aa23.02■■□□□ 1.28
CHMP1A-203ENST00000547614 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms