RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CLEC10AQ8IUN9 316 aa9.1□□□□□ -0.95
SNHG1-224ENST00000545688 FAM83CQ9BQN1 747 aa9.1□□□□□ -0.95
SNHG1-224ENST00000545688 TRIM56Q9BRZ2 755 aaKnown RBP9.1□□□□□ -0.95
SNHG1-224ENST00000545688 HIF3AQ9Y2N7 669 aa9.1□□□□□ -0.95
SNHG1-224ENST00000545688 IVNS1ABPQ9Y6Y0 642 aa9.1□□□□□ -0.95
SNHG1-224ENST00000545688 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-224ENST00000545688 DRD2P14416 443 aa9.09□□□□□ -0.95
SNHG1-224ENST00000545688 MAOBP27338 520 aa9.09□□□□□ -0.95
SNHG1-224ENST00000545688 GRM2Q14416 872 aa9.09□□□□□ -0.95
SNHG1-224ENST00000545688 POU4F3Q15319 338 aa9.09□□□□□ -0.95
SNHG1-224ENST00000545688 SGO2Q562F6 1265 aa9.09□□□□□ -0.95
SNHG1-224ENST00000545688 RNF43Q68DV7 783 aa9.09□□□□□ -0.95
SNHG1-224ENST00000545688 PI16Q6UXB8 463 aa9.09□□□□□ -0.95
SNHG1-224ENST00000545688 GLIS3Q8NEA6 775 aa9.09□□□□□ -0.95
SNHG1-224ENST00000545688 TMEM238LA0A1B0GVL6 79 aa9.08□□□□□ -0.96
SNHG1-224ENST00000545688 CYP11A1P05108 521 aa9.08□□□□□ -0.96
SNHG1-224ENST00000545688 PTPN12Q05209 780 aaKnown RBP9.08□□□□□ -0.96
SNHG1-224ENST00000545688 DSC3Q14574 896 aa9.08□□□□□ -0.96
SNHG1-224ENST00000545688 DBNDD2Q9BQY9 259 aa9.08□□□□□ -0.96
SNHG1-224ENST00000545688 ECEL1O95672 775 aa9.07□□□□□ -0.96
SNHG1-224ENST00000545688 TGFB1P01137 390 aa9.07□□□□□ -0.96
SNHG1-224ENST00000545688 MAP4P27816 1152 aaKnown RBP9.07□□□□□ -0.96
SNHG1-224ENST00000545688 ZDHHC13Q8IUH4 622 aa9.07□□□□□ -0.96
SNHG1-224ENST00000545688 TRAK1Q9UPV9 953 aa9.07□□□□□ -0.96
SNHG1-224ENST00000545688 TREHO43280 583 aa9.06□□□□□ -0.96
SNHG1-224ENST00000545688 RXRBP28702 533 aa9.06□□□□□ -0.96
SNHG1-224ENST00000545688 SSTR4P31391 388 aa9.06□□□□□ -0.96
SNHG1-224ENST00000545688 NBPF11Q86T75 865 aa9.06□□□□□ -0.96
SNHG1-224ENST00000545688 C2CD4AQ8NCU7 369 aaPredicted RBP9.06□□□□□ -0.96
SNHG1-224ENST00000545688 PNMA6FA0A0J9YX94 578 aa9.05□□□□□ -0.96
SNHG1-224ENST00000545688 SOX4Q06945 474 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-224ENST00000545688 KCNA1Q09470 495 aa9.05□□□□□ -0.96
SNHG1-224ENST00000545688 FAAP100Q0VG06 881 aa9.05□□□□□ -0.96
SNHG1-224ENST00000545688 DDX54Q8TDD1 881 aaKnown RBP9.05□□□□□ -0.96
SNHG1-224ENST00000545688 CORO1BQ9BR76 489 aa9.05□□□□□ -0.96
SNHG1-224ENST00000545688 NLRP2Q9NX02 1062 aa9.05□□□□□ -0.96
SNHG1-224ENST00000545688 ADH5P11766 374 aa9.04□□□□□ -0.96
SNHG1-224ENST00000545688 ZNF157P51786 506 aaPredicted RBP9.04□□□□□ -0.96
SNHG1-224ENST00000545688 FCGRTP55899 365 aa9.04□□□□□ -0.96
SNHG1-224ENST00000545688 PLCB3Q01970 1234 aa9.04□□□□□ -0.96
SNHG1-224ENST00000545688 RPS26P11Q5JNZ5 115 aaPredicted RBP9.04□□□□□ -0.96
SNHG1-224ENST00000545688 CDPF1Q6NVV7 123 aa9.04□□□□□ -0.96
SNHG1-224ENST00000545688 PCMTD2Q9NV79 361 aa9.04□□□□□ -0.96
SNHG1-224ENST00000545688 MED26O95402 600 aa9.03□□□□□ -0.96
SNHG1-224ENST00000545688 CD97P48960 835 aa9.03□□□□□ -0.96
SNHG1-224ENST00000545688 USP11P51784 963 aa9.03□□□□□ -0.96
SNHG1-224ENST00000545688 ENOX2Q16206 610 aaKnown RBP9.03□□□□□ -0.96
SNHG1-224ENST00000545688 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
SNHG1-224ENST00000545688 DTHD1Q6ZMT9 781 aa9.03□□□□□ -0.96
SNHG1-224ENST00000545688 SHKBP1Q8TBC3 707 aa9.03□□□□□ -0.96
SNHG1-224ENST00000545688 FBLIM1Q8WUP2 373 aa9.03□□□□□ -0.96
SNHG1-224ENST00000545688 MFSD14AQ96MC6 490 aa9.03□□□□□ -0.96
SNHG1-224ENST00000545688 BCO2Q9BYV7 579 aa9.03□□□□□ -0.96
SNHG1-224ENST00000545688 PRR19A6NJB7 356 aa9.02□□□□□ -0.97
SNHG1-224ENST00000545688 AP3B2Q13367 1082 aa9.02□□□□□ -0.97
SNHG1-224ENST00000545688 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.02□□□□□ -0.972e-12■■□□□ 11.6
SNHG1-224ENST00000545688 HP1BP3Q5SSJ5 553 aaPredicted RBP9.02□□□□□ -0.97
SNHG1-224ENST00000545688 TRAIPQ9BWF2 469 aa9.02□□□□□ -0.97
SNHG1-224ENST00000545688 ZFYVE1Q9HBF4 777 aa9.02□□□□□ -0.97
SNHG1-224ENST00000545688 ACTL7BQ9Y614 415 aa9.02□□□□□ -0.97
SNHG1-224ENST00000545688 FAM95CA0A1B0GW59 222 aa9.01□□□□□ -0.97
SNHG1-224ENST00000545688 COBLO75128 1261 aa9.01□□□□□ -0.97
SNHG1-224ENST00000545688 PDE3AQ14432 1141 aa9.01□□□□□ -0.97
SNHG1-224ENST00000545688 RAD18Q9NS91 495 aa9.01□□□□□ -0.97
SNHG1-224ENST00000545688 WDR64B1ANS9 1081 aa9□□□□□ -0.97
SNHG1-224ENST00000545688 MAPK8P45983 427 aa9□□□□□ -0.97
SNHG1-224ENST00000545688 NFKBIBQ15653 356 aa9□□□□□ -0.97
SNHG1-224ENST00000545688 NXPE4Q6UWF7 544 aa9□□□□□ -0.97
SNHG1-224ENST00000545688 AP4E1Q9UPM8 1137 aa9□□□□□ -0.97
SNHG1-224ENST00000545688 AOC2O75106 756 aa8.99□□□□□ -0.97
SNHG1-224ENST00000545688 FMR1Q06787 632 aaKnown RBP eCLIP8.99□□□□□ -0.97
SNHG1-224ENST00000545688 PAOXQ6QHF9 649 aa8.99□□□□□ -0.97
SNHG1-224ENST00000545688 DYMQ7RTS9 669 aa8.99□□□□□ -0.97
SNHG1-224ENST00000545688 ZSCAN29Q8IWY8 852 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-224ENST00000545688 FBXL6Q8N531 539 aa8.99□□□□□ -0.97
SNHG1-224ENST00000545688 EZH1Q92800 747 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-224ENST00000545688 ASB16Q96NS5 453 aa8.99□□□□□ -0.97
SNHG1-224ENST00000545688 SETDB2Q96T68 719 aa8.99□□□□□ -0.97
SNHG1-224ENST00000545688 WDR18Q9BV38 432 aa8.99□□□□□ -0.97
SNHG1-224ENST00000545688 ZC3H12CQ9C0D7 883 aaKnown RBP8.99□□□□□ -0.97
SNHG1-224ENST00000545688 PPP4R2Q9NY27 417 aa8.99□□□□□ -0.97
SNHG1-224ENST00000545688 GPN3Q9UHW5 284 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-224ENST00000545688 KIAA1324LA8MWY0 1029 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-224ENST00000545688 F13BP05160 661 aa8.98□□□□□ -0.97
SNHG1-224ENST00000545688 RAB6AP20340 208 aa8.98□□□□□ -0.97
SNHG1-224ENST00000545688 SHISA5Q8N114 240 aa8.98□□□□□ -0.97
SNHG1-224ENST00000545688 YIPF2Q9BWQ6 316 aa8.98□□□□□ -0.97
SNHG1-224ENST00000545688 XRCC5P13010 732 aaKnown RBP8.97□□□□□ -0.97
SNHG1-224ENST00000545688 LIG1P18858 919 aa8.97□□□□□ -0.97
SNHG1-224ENST00000545688 GRIK1P39086 918 aa8.97□□□□□ -0.97
SNHG1-224ENST00000545688 WDR89Q96FK6 387 aaPredicted RBP8.97□□□□□ -0.97
SNHG1-224ENST00000545688 CCDC86Q9H6F5 360 aaKnown RBP8.97□□□□□ -0.97
SNHG1-224ENST00000545688 FAM105AQ9NUU6 356 aa8.97□□□□□ -0.97
SNHG1-224ENST00000545688 AKAP2Q9Y2D5 859 aa8.97□□□□□ -0.97
SNHG1-224ENST00000545688 INTS5Q6P9B9 1019 aaKnown RBP8.96□□□□□ -0.98
SNHG1-224ENST00000545688 ATG3Q9NT62 314 aa8.96□□□□□ -0.98
SNHG1-224ENST00000545688 TMEM39AQ9NV64 488 aa8.96□□□□□ -0.98
SNHG1-224ENST00000545688 PRKAG2Q9UGJ0 569 aa8.96□□□□□ -0.98
SNHG1-224ENST00000545688 WWC3Q9ULE0 1092 aa8.96□□□□□ -0.98
SNHG1-224ENST00000545688 PPP1R9AQ9ULJ8 1098 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms